RNA–Protein interactions for RNA: ENST00000594417.1

ARHGEF1-208, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-208ENST00000594417 STK31Q9BXU1 1019 aa17.9■□□□□ 0.46
ARHGEF1-208ENST00000594417 SF3B3Q15393 1217 aaKnown RBP17.89■□□□□ 0.45
ARHGEF1-208ENST00000594417 TSPYL6Q8N831 410 aa17.89■□□□□ 0.45
ARHGEF1-208ENST00000594417 RTFDC1Q9BY42 306 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF1-208ENST00000594417 ZNRF3Q9ULT6 936 aa17.89■□□□□ 0.45
ARHGEF1-208ENST00000594417 JMYQ8N9B5 988 aa17.88■□□□□ 0.45
ARHGEF1-208ENST00000594417 ZBTB38Q8NAP3 1195 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF1-208ENST00000594417 SALL2Q9Y467 1007 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF1-208ENST00000594417 SNED1Q8TER0 1413 aa17.88■□□□□ 0.45
ARHGEF1-208ENST00000594417 ARFGEF2Q9Y6D5 1785 aa17.87■□□□□ 0.45
ARHGEF1-208ENST00000594417 CCDC191Q8NCU4 936 aa17.87■□□□□ 0.45
ARHGEF1-208ENST00000594417 CREBZFQ9NS37 354 aa17.87■□□□□ 0.45
ARHGEF1-208ENST00000594417 CWC25Q9NXE8 425 aaPredicted RBP17.87■□□□□ 0.45
ARHGEF1-208ENST00000594417 NSFL1CQ9UNZ2 370 aaKnown RBP17.87■□□□□ 0.45
ARHGEF1-208ENST00000594417 CNTROBQ8N137 903 aa17.86■□□□□ 0.45
ARHGEF1-208ENST00000594417 METTL22Q9BUU2 404 aaPredicted RBP17.86■□□□□ 0.45
ARHGEF1-208ENST00000594417 EPS15P42566 896 aa17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 RPS8P62241 208 aaKnown RBP17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 CXCL9Q07325 125 aa17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 KIAA2012Q0VF49 1180 aa17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 IL16Q14005 1332 aa17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 TNIP1Q15025 636 aa17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 TWISTNBQ3B726 338 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 CCDC88AQ3V6T2 1871 aa17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 MAP1SQ66K74 1059 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 CELF1Q92879 486 aaKnown RBP17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 MAP3K2Q9Y2U5 619 aa17.85■□□□□ 0.45
ARHGEF1-208ENST00000594417 CACNA1SQ13698 1873 aa17.84■□□□□ 0.45
ARHGEF1-208ENST00000594417 C6orf229H3BNL8 230 aa17.84■□□□□ 0.45
ARHGEF1-208ENST00000594417 PCCAP05165 728 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF1-208ENST00000594417 NEXNQ0ZGT2 675 aa17.84■□□□□ 0.45
ARHGEF1-208ENST00000594417 WASHC4Q2M389 1173 aa17.84■□□□□ 0.45
ARHGEF1-208ENST00000594417 CIAPIN1Q6FI81 312 aa17.84■□□□□ 0.45
ARHGEF1-208ENST00000594417 KSR2Q6VAB6 950 aa17.84■□□□□ 0.45
ARHGEF1-208ENST00000594417 JARID2Q92833 1246 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF1-208ENST00000594417 MKRN1Q9UHC7 482 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-208ENST00000594417 PI4KAP2A4QPH2 592 aa17.83■□□□□ 0.44
ARHGEF1-208ENST00000594417 TMEM88BA6NKF7 163 aa17.83■□□□□ 0.44
ARHGEF1-208ENST00000594417 RAD17O75943 681 aa17.83■□□□□ 0.44
ARHGEF1-208ENST00000594417 ITGBL1O95965 494 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF1-208ENST00000594417 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
ARHGEF1-208ENST00000594417 SCNN1DP51172 638 aa17.83■□□□□ 0.44
ARHGEF1-208ENST00000594417 CCDC152Q4G0S7 254 aa17.83■□□□□ 0.44
ARHGEF1-208ENST00000594417 USP50Q70EL3 339 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF1-208ENST00000594417 PI4KAP1Q8N8J0 262 aa17.83■□□□□ 0.44
ARHGEF1-208ENST00000594417 BCL2L13Q9BXK5 485 aa17.83■□□□□ 0.44
ARHGEF1-208ENST00000594417 PASKQ96RG2 1323 aa17.82■□□□□ 0.44
ARHGEF1-208ENST00000594417 RIMBP2O15034 1052 aa17.82■□□□□ 0.44
ARHGEF1-208ENST00000594417 PDE8AO60658 829 aa17.82■□□□□ 0.44
ARHGEF1-208ENST00000594417 IFFO2Q5TF58 517 aa17.82■□□□□ 0.44
ARHGEF1-208ENST00000594417 WDR63Q8IWG1 891 aa17.82■□□□□ 0.44
ARHGEF1-208ENST00000594417 FAM9BQ8IZU0 186 aa17.82■□□□□ 0.44
ARHGEF1-208ENST00000594417 EYA3Q99504 573 aa17.82■□□□□ 0.44
ARHGEF1-208ENST00000594417 DICER1Q9UPY3 1922 aaKnown RBP17.82■□□□□ 0.44
ARHGEF1-208ENST00000594417 GMPSP49915 693 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF1-208ENST00000594417 GPSM2P81274 684 aa17.81■□□□□ 0.44
ARHGEF1-208ENST00000594417 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF1-208ENST00000594417 SEC31BQ9NQW1 1179 aa17.81■□□□□ 0.44
ARHGEF1-208ENST00000594417 ADARB2Q9NS39 739 aaKnown RBP17.81■□□□□ 0.44
ARHGEF1-208ENST00000594417 GPRC5DQ9NZD1 345 aa17.81■□□□□ 0.44
ARHGEF1-208ENST00000594417 G3V3G9 751 aa17.8■□□□□ 0.44
ARHGEF1-208ENST00000594417 DCAF8Q5TAQ9 597 aa17.8■□□□□ 0.44
ARHGEF1-208ENST00000594417 ANKIB1Q9P2G1 1089 aa17.8■□□□□ 0.44
ARHGEF1-208ENST00000594417 COL4A5P29400 1685 aa17.8■□□□□ 0.44
ARHGEF1-208ENST00000594417 ZC3H12CQ9C0D7 883 aaKnown RBP17.79■□□□□ 0.44
ARHGEF1-208ENST00000594417 POLLQ9UGP5 575 aa17.79■□□□□ 0.44
ARHGEF1-208ENST00000594417 FANCIQ9NVI1 1328 aa17.78■□□□□ 0.44
ARHGEF1-208ENST00000594417 IGKV5-2P06315 115 aa17.78■□□□□ 0.44
ARHGEF1-208ENST00000594417 G2E3Q7L622 706 aa17.78■□□□□ 0.44
ARHGEF1-208ENST00000594417 ANKRD18AQ8IVF6 992 aa17.78■□□□□ 0.44
ARHGEF1-208ENST00000594417 TBC1D16Q8TBP0 767 aa17.78■□□□□ 0.44
ARHGEF1-208ENST00000594417 H7C1D1 291 aa17.77■□□□□ 0.44
ARHGEF1-208ENST00000594417 HSPA1AP0DMV8 641 aaKnown RBP17.77■□□□□ 0.44
ARHGEF1-208ENST00000594417 HSPA1BP0DMV9 641 aaKnown RBP17.77■□□□□ 0.44
ARHGEF1-208ENST00000594417 FKBP5Q13451 457 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF1-208ENST00000594417 DOK7Q18PE1 504 aa17.77■□□□□ 0.44
ARHGEF1-208ENST00000594417 CWF19L2Q2TBE0 894 aaKnown RBP17.77■□□□□ 0.44
ARHGEF1-208ENST00000594417 DBNDD1Q9H9R9 158 aa17.77■□□□□ 0.44
ARHGEF1-208ENST00000594417 CNOT7Q9UIV1 285 aaKnown RBP17.77■□□□□ 0.44
ARHGEF1-208ENST00000594417 ABT1Q9ULW3 272 aaKnown RBP17.77■□□□□ 0.44
ARHGEF1-208ENST00000594417 YDJCA8MPS7 323 aa17.76■□□□□ 0.43
ARHGEF1-208ENST00000594417 UFL1O94874 794 aa17.76■□□□□ 0.43
ARHGEF1-208ENST00000594417 EXOSC9Q06265 439 aaKnown RBP17.76■□□□□ 0.43
ARHGEF1-208ENST00000594417 FLIIQ13045 1269 aa17.76■□□□□ 0.43
ARHGEF1-208ENST00000594417 CDC5LQ99459 802 aaKnown RBP17.76■□□□□ 0.43
ARHGEF1-208ENST00000594417 MYH16Q9H6N6 1097 aa17.76■□□□□ 0.43
ARHGEF1-208ENST00000594417 GGA1Q9UJY5 639 aa17.76■□□□□ 0.43
ARHGEF1-208ENST00000594417 CDHR2Q9BYE9 1310 aa17.75■□□□□ 0.43
ARHGEF1-208ENST00000594417 SCN4AP35499 1836 aa17.75■□□□□ 0.43
ARHGEF1-208ENST00000594417 NEURL1BA8MQ27 555 aa17.75■□□□□ 0.43
ARHGEF1-208ENST00000594417 VAMP4O75379 141 aa17.75■□□□□ 0.43
ARHGEF1-208ENST00000594417 CTSWP56202 376 aa17.75■□□□□ 0.43
ARHGEF1-208ENST00000594417 DEFB115Q30KQ5 88 aa17.75■□□□□ 0.43
ARHGEF1-208ENST00000594417 GPR101Q96P66 508 aaPredicted RBP17.75■□□□□ 0.43
ARHGEF1-208ENST00000594417 PODXL2Q9NZ53 605 aa17.75■□□□□ 0.43
ARHGEF1-208ENST00000594417 CNTNAP1P78357 1384 aa17.75■□□□□ 0.43
ARHGEF1-208ENST00000594417 PSMD14O00487 310 aa17.74■□□□□ 0.43
ARHGEF1-208ENST00000594417 ECE2O60344 883 aa17.74■□□□□ 0.43
ARHGEF1-208ENST00000594417 VEGFBP49765 207 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms