RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 GRAPLQ8TC17 118 aaPredicted RBP29.49■■■□□ 2.31
SSBP4-203ENST00000593641 DBF4Q9UBU7 674 aaPredicted RBP29.49■■■□□ 2.31
SSBP4-203ENST00000593641 DDX60Q8IY21 1712 aaKnown RBP29.48■■■□□ 2.31
SSBP4-203ENST00000593641 FOXN1O15353 648 aa29.48■■■□□ 2.31
SSBP4-203ENST00000593641 ANKRD13DQ6ZTN6 518 aa29.47■■■□□ 2.31
SSBP4-203ENST00000593641 TMC4Q7Z404 712 aa29.46■■■□□ 2.31
SSBP4-203ENST00000593641 CFAP44Q96MT7 982 aa29.46■■■□□ 2.31
SSBP4-203ENST00000593641 ADARB2Q9NS39 739 aaKnown RBP29.46■■■□□ 2.31
SSBP4-203ENST00000593641 GPRC5DQ9NZD1 345 aa29.46■■■□□ 2.31
SSBP4-203ENST00000593641 CXCL9Q07325 125 aa29.45■■■□□ 2.31
SSBP4-203ENST00000593641 KIAA2012Q0VF49 1180 aa29.45■■■□□ 2.31
SSBP4-203ENST00000593641 ZNF428Q96B54 188 aa29.45■■■□□ 2.31
SSBP4-203ENST00000593641 LRRC37AA6NMS7 1700 aa29.45■■■□□ 2.3
SSBP4-203ENST00000593641 CTCFP49711 727 aaPredicted RBP29.44■■■□□ 2.3
SSBP4-203ENST00000593641 HYPKQ9NX55 129 aa29.44■■■□□ 2.3
SSBP4-203ENST00000593641 DUSP27Q5VZP5 1158 aa29.43■■■□□ 2.3
SSBP4-203ENST00000593641 CIAPIN1Q6FI81 312 aa29.43■■■□□ 2.3
SSBP4-203ENST00000593641 GMPSP49915 693 aaPredicted RBP29.42■■■□□ 2.3
SSBP4-203ENST00000593641 ISCA1Q9BUE6 129 aa29.42■■■□□ 2.3
SSBP4-203ENST00000593641 PRDM10Q9NQV6 1147 aa29.42■■■□□ 2.3
SSBP4-203ENST00000593641 CDHR2Q9BYE9 1310 aa29.42■■■□□ 2.3
SSBP4-203ENST00000593641 WDR33Q9C0J8 1336 aaKnown RBP29.42■■■□□ 2.3
SSBP4-203ENST00000593641 ATP5J2-PTCD1G3V325 749 aa29.41■■■□□ 2.3
SSBP4-203ENST00000593641 TNIP1Q15025 636 aa29.41■■■□□ 2.3
SSBP4-203ENST00000593641 FAM89AQ96GI7 184 aa29.41■■■□□ 2.3
SSBP4-203ENST00000593641 BCL2L13Q9BXK5 485 aa29.41■■■□□ 2.3
SSBP4-203ENST00000593641 MBIPQ9NS73 344 aa29.41■■■□□ 2.3
SSBP4-203ENST00000593641 WBP1LQ9NX94 342 aa29.41■■■□□ 2.3
SSBP4-203ENST00000593641 PAXIP1Q6ZW49 1069 aaPredicted RBP29.4■■■□□ 2.3
SSBP4-203ENST00000593641 PRKRIP1Q9H875 184 aaPredicted RBP29.4■■■□□ 2.3
SSBP4-203ENST00000593641 DUOX1Q9NRD9 1551 aa29.39■■■□□ 2.3
SSBP4-203ENST00000593641 RAD17O75943 681 aa29.39■■■□□ 2.3
SSBP4-203ENST00000593641 TRAF5O00463 557 aa29.38■■■□□ 2.29
SSBP4-203ENST00000593641 MAP2K1Q02750 393 aaPredicted RBP29.38■■■□□ 2.29
SSBP4-203ENST00000593641 FMR1Q06787 632 aaKnown RBP eCLIP29.38■■■□□ 2.29
SSBP4-203ENST00000593641 SF3B3Q15393 1217 aaKnown RBP29.38■■■□□ 2.29
SSBP4-203ENST00000593641 ECE1P42892 770 aa29.37■■■□□ 2.29
SSBP4-203ENST00000593641 CALD1Q05682 793 aaKnown RBP29.37■■■□□ 2.29
SSBP4-203ENST00000593641 GOLGA2Q08379 1002 aa29.37■■■□□ 2.29
SSBP4-203ENST00000593641 RTL5Q5HYW3 569 aaPredicted RBP29.36■■■□□ 2.29
SSBP4-203ENST00000593641 IFT57Q9NWB7 429 aa29.36■■■□□ 2.29
SSBP4-203ENST00000593641 NSFL1CQ9UNZ2 370 aaKnown RBP29.36■■■□□ 2.29
SSBP4-203ENST00000593641 RIC3Q7Z5B4 369 aa29.35■■■□□ 2.29
SSBP4-203ENST00000593641 CELF1Q92879 486 aaKnown RBP29.35■■■□□ 2.29
SSBP4-203ENST00000593641 CAPNS2Q96L46 248 aa29.35■■■□□ 2.29
SSBP4-203ENST00000593641 THSD7BQ9C0I4 1608 aa29.34■■■□□ 2.29
SSBP4-203ENST00000593641 IRS4O14654 1257 aaPredicted RBP29.34■■■□□ 2.29
SSBP4-203ENST00000593641 APAF1O14727 1248 aa29.34■■■□□ 2.29
SSBP4-203ENST00000593641 ZNF853P0CG23 659 aa29.34■■■□□ 2.29
SSBP4-203ENST00000593641 LBX1P52954 281 aa29.34■■■□□ 2.29
SSBP4-203ENST00000593641 GNAI1P63096 354 aa29.34■■■□□ 2.29
SSBP4-203ENST00000593641 TRIM28Q13263 835 aaKnown RBP29.34■■■□□ 2.29
SSBP4-203ENST00000593641 WASHC4Q2M389 1173 aa29.34■■■□□ 2.29
SSBP4-203ENST00000593641 CST9Q5W186 159 aa29.34■■■□□ 2.29
SSBP4-203ENST00000593641 YDJCA8MPS7 323 aa29.33■■■□□ 2.29
SSBP4-203ENST00000593641 GRM1Q13255 1194 aa29.33■■■□□ 2.29
SSBP4-203ENST00000593641 TLL2Q9Y6L7 1015 aa29.33■■■□□ 2.29
SSBP4-203ENST00000593641 C6orf229H3BNL8 230 aa29.32■■■□□ 2.28
SSBP4-203ENST00000593641 ZC3H15Q8WU90 426 aaKnown RBP29.32■■■□□ 2.28
SSBP4-203ENST00000593641 H7C1D1 291 aa29.31■■■□□ 2.28
SSBP4-203ENST00000593641 HSP90B1P14625 803 aaKnown RBP29.31■■■□□ 2.28
SSBP4-203ENST00000593641 CYP4F22Q6NT55 531 aa29.31■■■□□ 2.28
SSBP4-203ENST00000593641 BEGAINQ9BUH8 593 aa29.31■■■□□ 2.28
SSBP4-203ENST00000593641 CNOT7Q9UIV1 285 aaKnown RBP29.31■■■□□ 2.28
SSBP4-203ENST00000593641 ELL2O00472 640 aaPredicted RBP29.3■■■□□ 2.28
SSBP4-203ENST00000593641 CELF2O95319 508 aaKnown RBP29.3■■■□□ 2.28
SSBP4-203ENST00000593641 ZBTB38Q8NAP3 1195 aaPredicted RBP29.3■■■□□ 2.28
SSBP4-203ENST00000593641 EYA3Q99504 573 aa29.3■■■□□ 2.28
SSBP4-203ENST00000593641 GLIS2Q9BZE0 524 aaPredicted RBP29.3■■■□□ 2.28
SSBP4-203ENST00000593641 PGAP2Q9UHJ9 254 aa29.3■■■□□ 2.28
SSBP4-203ENST00000593641 HSPA8P11142 646 aaKnown RBP29.29■■■□□ 2.28
SSBP4-203ENST00000593641 GPSM2P81274 684 aa29.29■■■□□ 2.28
SSBP4-203ENST00000593641 MICALL2Q8IY33 904 aa29.29■■■□□ 2.28
SSBP4-203ENST00000593641 TRPM4Q8TD43 1214 aa29.29■■■□□ 2.28
SSBP4-203ENST00000593641 GPR101Q96P66 508 aaPredicted RBP29.29■■■□□ 2.28
SSBP4-203ENST00000593641 PHAXQ9H814 394 aaKnown RBP29.29■■■□□ 2.28
SSBP4-203ENST00000593641 DBNDD1Q9H9R9 158 aa29.29■■■□□ 2.28
SSBP4-203ENST00000593641 COL4A1P02462 1669 aa29.28■■■□□ 2.28
SSBP4-203ENST00000593641 RIMBP2O15034 1052 aa29.28■■■□□ 2.28
SSBP4-203ENST00000593641 MYD88Q99836 296 aa29.28■■■□□ 2.28
SSBP4-203ENST00000593641 CHMP4AQ9BY43 222 aa29.28■■■□□ 2.28
SSBP4-203ENST00000593641 HIRAP54198 1017 aaPredicted RBP29.27■■■□□ 2.28
SSBP4-203ENST00000593641 RPS8P62241 208 aaKnown RBP29.27■■■□□ 2.28
SSBP4-203ENST00000593641 CDC37L1Q7L3B6 337 aa29.27■■■□□ 2.28
SSBP4-203ENST00000593641 POLLQ9UGP5 575 aa29.27■■■□□ 2.28
SSBP4-203ENST00000593641 ZBTB12Q9Y330 459 aaPredicted RBP29.27■■■□□ 2.28
SSBP4-203ENST00000593641 PSMD14O00487 310 aa29.26■■■□□ 2.27
SSBP4-203ENST00000593641 SAPCD2Q86UD0 394 aa29.26■■■□□ 2.27
SSBP4-203ENST00000593641 DPF2Q92785 391 aa29.26■■■□□ 2.27
SSBP4-203ENST00000593641 ZNF408Q9H9D4 720 aa29.26■■■□□ 2.27
SSBP4-203ENST00000593641 ECE2O60344 883 aa29.25■■■□□ 2.27
SSBP4-203ENST00000593641 CCDC191Q8NCU4 936 aa29.25■■■□□ 2.27
SSBP4-203ENST00000593641 POLR2AP24928 1970 aaKnown RBP29.24■■■□□ 2.27
SSBP4-203ENST00000593641 SHTN1A0MZ66 631 aa29.24■■■□□ 2.27
SSBP4-203ENST00000593641 DDX58O95786 925 aaKnown RBP29.24■■■□□ 2.27
SSBP4-203ENST00000593641 TBC1D16Q8TBP0 767 aa29.24■■■□□ 2.27
SSBP4-203ENST00000593641 RPS12P25398 132 aaKnown RBP29.23■■■□□ 2.27
SSBP4-203ENST00000593641 MAP2K2P36507 400 aa29.23■■■□□ 2.27
SSBP4-203ENST00000593641 CCDC152Q4G0S7 254 aa29.23■■■□□ 2.27
SSBP4-203ENST00000593641 CCDC30Q5VVM6 783 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 1301.4 ms