RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 CDHR2Q9BYE9 1310 aa19.25■□□□□ 0.67
ERCC1-217ENST00000592905 GRAPQ13588 217 aa19.24■□□□□ 0.67
ERCC1-217ENST00000592905 RTKN2Q8IZC4 609 aa19.24■□□□□ 0.67
ERCC1-217ENST00000592905 GRAPLQ8TC17 118 aaPredicted RBP19.24■□□□□ 0.67
ERCC1-217ENST00000592905 CELF1Q92879 486 aaKnown RBP19.24■□□□□ 0.67
ERCC1-217ENST00000592905 ZBED9Q6R2W3 1325 aa19.24■□□□□ 0.67
ERCC1-217ENST00000592905 BBOX1O75936 387 aa19.23■□□□□ 0.67
ERCC1-217ENST00000592905 CT47B1P0C2W7 299 aaPredicted RBP19.23■□□□□ 0.67
ERCC1-217ENST00000592905 HSP90B1P14625 803 aaKnown RBP19.23■□□□□ 0.67
ERCC1-217ENST00000592905 RARSP54136 660 aaKnown RBP19.23■□□□□ 0.67
ERCC1-217ENST00000592905 FKBP4Q02790 459 aaKnown RBP eCLIP19.23■□□□□ 0.67
ERCC1-217ENST00000592905 ZNF277Q9NRM2 450 aaPredicted RBP19.23■□□□□ 0.67
ERCC1-217ENST00000592905 ATP6V0A2Q9Y487 856 aa19.23■□□□□ 0.67
ERCC1-217ENST00000592905 LTBP3Q9NS15 1303 aa19.23■□□□□ 0.67
ERCC1-217ENST00000592905 TIAM2Q8IVF5 1701 aa19.22■□□□□ 0.67
ERCC1-217ENST00000592905 CASP7P55210 303 aa19.22■□□□□ 0.67
ERCC1-217ENST00000592905 NOB1Q9ULX3 412 aaKnown RBP19.22■□□□□ 0.67
ERCC1-217ENST00000592905 PTPRCP08575 1304 aa19.22■□□□□ 0.67
ERCC1-217ENST00000592905 CCDC152Q4G0S7 254 aa19.21■□□□□ 0.67
ERCC1-217ENST00000592905 CC2D2BQ6DHV5 1058 aa19.21■□□□□ 0.67
ERCC1-217ENST00000592905 SNED1Q8TER0 1413 aa19.21■□□□□ 0.67
ERCC1-217ENST00000592905 SRCIN1Q9C0H9 1055 aa19.21■□□□□ 0.67
ERCC1-217ENST00000592905 SPEF2Q9C093 1822 aa19.21■□□□□ 0.67
ERCC1-217ENST00000592905 CTSWP56202 376 aa19.2■□□□□ 0.66
ERCC1-217ENST00000592905 SP8Q8IXZ3 490 aa19.2■□□□□ 0.66
ERCC1-217ENST00000592905 TTLL11Q8NHH1 800 aa19.2■□□□□ 0.66
ERCC1-217ENST00000592905 TMX4Q9H1E5 349 aaPredicted RBP19.2■□□□□ 0.66
ERCC1-217ENST00000592905 GPBP1L1Q9HC44 474 aaPredicted RBP19.2■□□□□ 0.66
ERCC1-217ENST00000592905 RPS8P62241 208 aaKnown RBP19.19■□□□□ 0.66
ERCC1-217ENST00000592905 GREM2Q9H772 168 aa19.19■□□□□ 0.66
ERCC1-217ENST00000592905 C9orf78Q9NZ63 289 aaPredicted RBP19.19■□□□□ 0.66
ERCC1-217ENST00000592905 BCAR3O75815 825 aa19.18■□□□□ 0.66
ERCC1-217ENST00000592905 ALDH1L1O75891 902 aa19.18■□□□□ 0.66
ERCC1-217ENST00000592905 PSMD1Q99460 953 aa19.18■□□□□ 0.66
ERCC1-217ENST00000592905 GRM8O00222 908 aa19.17■□□□□ 0.66
ERCC1-217ENST00000592905 IARSP41252 1262 aaKnown RBP19.17■□□□□ 0.66
ERCC1-217ENST00000592905 DPP8Q6V1X1 898 aaPredicted RBP19.17■□□□□ 0.66
ERCC1-217ENST00000592905 MPNDQ8N594 471 aa19.17■□□□□ 0.66
ERCC1-217ENST00000592905 EPHA10Q5JZY3 1008 aa19.16■□□□□ 0.66
ERCC1-217ENST00000592905 PLA2G12BQ9BX93 195 aa19.16■□□□□ 0.66
ERCC1-217ENST00000592905 NMRK2Q9NPI5 230 aa19.16■□□□□ 0.66
ERCC1-217ENST00000592905 LRRC37AA6NMS7 1700 aa19.16■□□□□ 0.66
ERCC1-217ENST00000592905 NBPF7P0C2Y1 421 aaPredicted RBP19.15■□□□□ 0.66
ERCC1-217ENST00000592905 BRPF1P55201 1214 aaPredicted RBP19.15■□□□□ 0.66
ERCC1-217ENST00000592905 GPSM2P81274 684 aa19.15■□□□□ 0.66
ERCC1-217ENST00000592905 FOXO4P98177 505 aa19.15■□□□□ 0.66
ERCC1-217ENST00000592905 GRIPAP1Q4V328 841 aa19.15■□□□□ 0.66
ERCC1-217ENST00000592905 TMC4Q7Z404 712 aa19.15■□□□□ 0.66
ERCC1-217ENST00000592905 NSFL1CQ9UNZ2 370 aaKnown RBP19.15■□□□□ 0.66
ERCC1-217ENST00000592905 CSF1RP07333 972 aa19.14■□□□□ 0.65
ERCC1-217ENST00000592905 FAM161AQ3B820 660 aa19.14■□□□□ 0.65
ERCC1-217ENST00000592905 ANKRD18AQ8IVF6 992 aa19.14■□□□□ 0.65
ERCC1-217ENST00000592905 FRAT1Q92837 279 aaPredicted RBP19.14■□□□□ 0.65
ERCC1-217ENST00000592905 CHMP3Q9Y3E7 222 aa19.14■□□□□ 0.65
ERCC1-217ENST00000592905 COL4A5P29400 1685 aa19.14■□□□□ 0.65
ERCC1-217ENST00000592905 GLTPD2A6NH11 291 aa19.13■□□□□ 0.65
ERCC1-217ENST00000592905 ITGA6P23229 1130 aa19.13■□□□□ 0.65
ERCC1-217ENST00000592905 AOC3Q16853 763 aa19.13■□□□□ 0.65
ERCC1-217ENST00000592905 LARGE2Q8N3Y3 721 aa19.13■□□□□ 0.65
ERCC1-217ENST00000592905 SUCLG2Q96I99 432 aa19.13■□□□□ 0.65
ERCC1-217ENST00000592905 API5Q9BZZ5 524 aaKnown RBP19.13■□□□□ 0.65
ERCC1-217ENST00000592905 RRAGCQ9HB90 399 aa19.13■□□□□ 0.65
ERCC1-217ENST00000592905 TNNQ9UQP3 1299 aa19.13■□□□□ 0.65
ERCC1-217ENST00000592905 ZC3H4Q9UPT8 1303 aaKnown RBP19.13■□□□□ 0.65
ERCC1-217ENST00000592905 KDM2BQ8NHM5 1336 aa19.12■□□□□ 0.65
ERCC1-217ENST00000592905 PPIP5K2O43314 1243 aa19.12■□□□□ 0.65
ERCC1-217ENST00000592905 LMBR1LQ6UX01 489 aa19.12■□□□□ 0.65
ERCC1-217ENST00000592905 KAZALD1Q96I82 304 aa19.12■□□□□ 0.65
ERCC1-217ENST00000592905 GPR101Q96P66 508 aaPredicted RBP19.12■□□□□ 0.65
ERCC1-217ENST00000592905 CDC5LQ99459 802 aaKnown RBP19.12■□□□□ 0.65
ERCC1-217ENST00000592905 RTFDC1Q9BY42 306 aaPredicted RBP19.12■□□□□ 0.65
ERCC1-217ENST00000592905 DUOX1Q9NRD9 1551 aa19.11■□□□□ 0.65
ERCC1-217ENST00000592905 RTL9Q8NET4 1388 aa19.11■□□□□ 0.65
ERCC1-217ENST00000592905 KIF16BQ96L93 1317 aa19.11■□□□□ 0.65
ERCC1-217ENST00000592905 ZNF541Q9H0D2 1346 aa19.11■□□□□ 0.65
ERCC1-217ENST00000592905 C6orf229H3BNL8 230 aa19.11■□□□□ 0.65
ERCC1-217ENST00000592905 DDNO94850 711 aaPredicted RBP19.11■□□□□ 0.65
ERCC1-217ENST00000592905 DPY19L2Q6NUT2 758 aa19.11■□□□□ 0.65
ERCC1-217ENST00000592905 SUPT20HQ8NEM7 779 aa19.11■□□□□ 0.65
ERCC1-217ENST00000592905 JDP2Q8WYK2 163 aa19.11■□□□□ 0.65
ERCC1-217ENST00000592905 USP44Q9H0E7 712 aa19.11■□□□□ 0.65
ERCC1-217ENST00000592905 POLLQ9UGP5 575 aa19.11■□□□□ 0.65
ERCC1-217ENST00000592905 UTYO14607 1347 aa19.1■□□□□ 0.65
ERCC1-217ENST00000592905 KIF3CO14782 793 aa19.1■□□□□ 0.65
ERCC1-217ENST00000592905 RIMBP2O15034 1052 aa19.1■□□□□ 0.65
ERCC1-217ENST00000592905 ANKIB1Q9P2G1 1089 aa19.1■□□□□ 0.65
ERCC1-217ENST00000592905 LTBP1Q14766 1721 aa19.09■□□□□ 0.65
ERCC1-217ENST00000592905 ANKRD18BA2A2Z9 1011 aa19.09■□□□□ 0.65
ERCC1-217ENST00000592905 WTIPA6NIX2 430 aaPredicted RBP19.09■□□□□ 0.65
ERCC1-217ENST00000592905 FZD9O00144 591 aa19.09■□□□□ 0.65
ERCC1-217ENST00000592905 IGHMBP2P38935 993 aaKnown RBP19.09■□□□□ 0.65
ERCC1-217ENST00000592905 CCT4P50991 539 aaKnown RBP19.09■□□□□ 0.65
ERCC1-217ENST00000592905 ARHGAP45Q92619 1136 aa19.09■□□□□ 0.65
ERCC1-217ENST00000592905 CLUAP1Q96AJ1 413 aa19.09■□□□□ 0.65
ERCC1-217ENST00000592905 ZNF594Q96JF6 807 aaPredicted RBP19.09■□□□□ 0.65
ERCC1-217ENST00000592905 IPO8O15397 1037 aaKnown RBP19.08■□□□□ 0.64
ERCC1-217ENST00000592905 IFIT5Q13325 482 aaKnown RBP19.08■□□□□ 0.64
ERCC1-217ENST00000592905 NIM1KQ8IY84 436 aa19.08■□□□□ 0.64
ERCC1-217ENST00000592905 TBC1D16Q8TBP0 767 aa19.08■□□□□ 0.64
ERCC1-217ENST00000592905 YTHDC1Q96MU7 727 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms