RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 RLBP1P12271 317 aa12.55□□□□□ -0.4
TPM4-216ENST00000592822 CTSWP56202 376 aa12.55□□□□□ -0.4
TPM4-216ENST00000592822 FOXO4P98177 505 aa12.55□□□□□ -0.4
TPM4-216ENST00000592822 EPHA10Q5JZY3 1008 aa12.55□□□□□ -0.4
TPM4-216ENST00000592822 PRPF40BQ6NWY9 871 aaKnown RBP12.55□□□□□ -0.4
TPM4-216ENST00000592822 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
TPM4-216ENST00000592822 TMEM57Q8N5G2 664 aa12.55□□□□□ -0.4
TPM4-216ENST00000592822 RBM17Q96I25 401 aaKnown RBP12.55□□□□□ -0.4
TPM4-216ENST00000592822 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
TPM4-216ENST00000592822 TTLL11Q8NHH1 800 aa12.54□□□□□ -0.4
TPM4-216ENST00000592822 PANK1Q8TE04 598 aa12.54□□□□□ -0.4
TPM4-216ENST00000592822 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
TPM4-216ENST00000592822 KAZALD1Q96I82 304 aa12.54□□□□□ -0.4
TPM4-216ENST00000592822 SUCLG2Q96I99 432 aa12.54□□□□□ -0.4
TPM4-216ENST00000592822 CCDC85AQ96PX6 553 aaPredicted RBP12.54□□□□□ -0.4
TPM4-216ENST00000592822 CSF1RP07333 972 aa12.53□□□□□ -0.4
TPM4-216ENST00000592822 CCDC152Q4G0S7 254 aa12.53□□□□□ -0.4
TPM4-216ENST00000592822 DDX46Q7L014 1031 aaKnown RBP12.53□□□□□ -0.4
TPM4-216ENST00000592822 FTSJ3Q8IY81 847 aaKnown RBP12.53□□□□□ -0.4
TPM4-216ENST00000592822 GREM2Q9H772 168 aa12.53□□□□□ -0.4
TPM4-216ENST00000592822 SEC31BQ9NQW1 1179 aa12.53□□□□□ -0.4
TPM4-216ENST00000592822 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
TPM4-216ENST00000592822 C21orf2O43822 256 aa12.52□□□□□ -0.41
TPM4-216ENST00000592822 GRIN3BO60391 1043 aa12.52□□□□□ -0.41
TPM4-216ENST00000592822 GRAPQ13588 217 aa12.52□□□□□ -0.41
TPM4-216ENST00000592822 OLFM4Q6UX06 510 aa12.52□□□□□ -0.41
TPM4-216ENST00000592822 SLC51AQ86UW1 340 aa12.52□□□□□ -0.41
TPM4-216ENST00000592822 GRAPLQ8TC17 118 aaPredicted RBP12.52□□□□□ -0.41
TPM4-216ENST00000592822 CELF1Q92879 486 aaKnown RBP12.52□□□□□ -0.41
TPM4-216ENST00000592822 MEIS3Q99687 375 aa12.52□□□□□ -0.41
TPM4-216ENST00000592822 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.41
TPM4-216ENST00000592822 UTRNP46939 3433 aa12.52□□□□□ -0.41
TPM4-216ENST00000592822 RTL9Q8NET4 1388 aa12.52□□□□□ -0.41
TPM4-216ENST00000592822 PPEF1O14829 653 aaPredicted RBP12.51□□□□□ -0.41
TPM4-216ENST00000592822 BBOX1O75936 387 aa12.51□□□□□ -0.41
TPM4-216ENST00000592822 UBTFL1P0CB47 393 aaPredicted RBP12.51□□□□□ -0.41
TPM4-216ENST00000592822 MS4A1P11836 297 aa12.51□□□□□ -0.41
TPM4-216ENST00000592822 FAM161AQ3B820 660 aa12.51□□□□□ -0.41
TPM4-216ENST00000592822 LMBR1LQ6UX01 489 aa12.51□□□□□ -0.41
TPM4-216ENST00000592822 ANKRD44Q8N8A2 993 aa12.51□□□□□ -0.41
TPM4-216ENST00000592822 BICC1Q9H694 974 aaKnown RBP12.51□□□□□ -0.41
TPM4-216ENST00000592822 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
TPM4-216ENST00000592822 FER1L6Q2WGJ9 1857 aa12.51□□□□□ -0.41
TPM4-216ENST00000592822 RPS8P62241 208 aaKnown RBP12.5□□□□□ -0.41
TPM4-216ENST00000592822 RABL6Q3YEC7 729 aaPredicted RBP12.5□□□□□ -0.41
TPM4-216ENST00000592822 C20orf194Q5TEA3 1177 aa12.5□□□□□ -0.41
TPM4-216ENST00000592822 ARHGAP27Q6ZUM4 889 aa12.5□□□□□ -0.41
TPM4-216ENST00000592822 ITPRIPQ8IWB1 547 aa12.5□□□□□ -0.41
TPM4-216ENST00000592822 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.5□□□□□ -0.41
TPM4-216ENST00000592822 ATP6V0A2Q9Y487 856 aa12.5□□□□□ -0.41
TPM4-216ENST00000592822 LRRC37AA6NMS7 1700 aa12.5□□□□□ -0.41
TPM4-216ENST00000592822 SNED1Q8TER0 1413 aa12.49□□□□□ -0.41
TPM4-216ENST00000592822 ZBTB7BO15156 539 aaPredicted RBP12.49□□□□□ -0.41
TPM4-216ENST00000592822 GNAI3P08754 354 aa12.49□□□□□ -0.41
TPM4-216ENST00000592822 ITGA6P23229 1130 aa12.49□□□□□ -0.41
TPM4-216ENST00000592822 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
TPM4-216ENST00000592822 PDE3AQ14432 1141 aa12.49□□□□□ -0.41
TPM4-216ENST00000592822 LRRFIP2Q9Y608 721 aaKnown RBP12.49□□□□□ -0.41
TPM4-216ENST00000592822 NFKBIEO00221 500 aa12.48□□□□□ -0.41
TPM4-216ENST00000592822 CCDC93Q567U6 631 aa12.48□□□□□ -0.41
TPM4-216ENST00000592822 SOGA3Q5TF21 947 aa12.48□□□□□ -0.41
TPM4-216ENST00000592822 TMC4Q7Z404 712 aa12.48□□□□□ -0.41
TPM4-216ENST00000592822 ANKRD18AQ8IVF6 992 aa12.48□□□□□ -0.41
TPM4-216ENST00000592822 SP8Q8IXZ3 490 aa12.48□□□□□ -0.41
TPM4-216ENST00000592822 CDC5LQ99459 802 aaKnown RBP12.48□□□□□ -0.41
TPM4-216ENST00000592822 COG6Q9Y2V7 657 aa12.48□□□□□ -0.41
TPM4-216ENST00000592822 CHMP3Q9Y3E7 222 aa12.48□□□□□ -0.41
TPM4-216ENST00000592822 SBF1O95248 1867 aa12.48□□□□□ -0.41
TPM4-216ENST00000592822 ANKRD18BA2A2Z9 1011 aa12.47□□□□□ -0.41
TPM4-216ENST00000592822 PRELPP51888 382 aa12.47□□□□□ -0.41
TPM4-216ENST00000592822 IFIT5Q13325 482 aaKnown RBP12.47□□□□□ -0.41
TPM4-216ENST00000592822 MVPQ14764 893 aaKnown RBP12.47□□□□□ -0.41
TPM4-216ENST00000592822 CC2D2BQ6DHV5 1058 aa12.47□□□□□ -0.41
TPM4-216ENST00000592822 CHD4Q14839 1912 aa12.47□□□□□ -0.41
TPM4-216ENST00000592822 CCDC88AQ3V6T2 1871 aa12.46□□□□□ -0.41
TPM4-216ENST00000592822 GNAI2P04899 355 aa12.46□□□□□ -0.41
TPM4-216ENST00000592822 RASSF7Q02833 373 aa12.46□□□□□ -0.41
TPM4-216ENST00000592822 CCDC57Q2TAC2 916 aa12.46□□□□□ -0.41
TPM4-216ENST00000592822 RTKN2Q8IZC4 609 aa12.46□□□□□ -0.41
TPM4-216ENST00000592822 ZNF594Q96JF6 807 aaPredicted RBP12.46□□□□□ -0.41
TPM4-216ENST00000592822 BSDC1Q9NW68 430 aaPredicted RBP12.46□□□□□ -0.41
TPM4-216ENST00000592822 HDAC5Q9UQL6 1122 aa12.46□□□□□ -0.41
TPM4-216ENST00000592822 LTBP1Q14766 1721 aa12.45□□□□□ -0.42
TPM4-216ENST00000592822 LTBP3Q9NS15 1303 aa12.45□□□□□ -0.42
TPM4-216ENST00000592822 GPSM2P81274 684 aa12.45□□□□□ -0.42
TPM4-216ENST00000592822 C1orf115Q9H7X2 142 aa12.45□□□□□ -0.42
TPM4-216ENST00000592822 DDX19BQ9UMR2 479 aa12.45□□□□□ -0.42
TPM4-216ENST00000592822 DUOX1Q9NRD9 1551 aa12.44□□□□□ -0.42
TPM4-216ENST00000592822 IGHMBP2P38935 993 aaKnown RBP12.44□□□□□ -0.42
TPM4-216ENST00000592822 RFX5P48382 616 aaPredicted RBP12.44□□□□□ -0.42
TPM4-216ENST00000592822 FKBP4Q02790 459 aaKnown RBP eCLIP12.44□□□□□ -0.42
TPM4-216ENST00000592822 MTX1Q13505 466 aa12.44□□□□□ -0.42
TPM4-216ENST00000592822 GRIPAP1Q4V328 841 aa12.44□□□□□ -0.42
TPM4-216ENST00000592822 MPNDQ8N594 471 aa12.44□□□□□ -0.42
TPM4-216ENST00000592822 PSMD1Q99460 953 aa12.44□□□□□ -0.42
TPM4-216ENST00000592822 TMX4Q9H1E5 349 aaPredicted RBP12.44□□□□□ -0.42
TPM4-216ENST00000592822 TAOK3Q9H2K8 898 aa12.44□□□□□ -0.42
TPM4-216ENST00000592822 ZBTB40Q9NUA8 1239 aa12.44□□□□□ -0.42
TPM4-216ENST00000592822 SUPT16HQ9Y5B9 1047 aaKnown RBP12.44□□□□□ -0.42
TPM4-216ENST00000592822 A0A1B0GUL6 1792 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms