RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 BRPF1P55201 1214 aaPredicted RBP23.65■■□□□ 1.38
TCF3-216ENST00000592395 CCDC93Q567U6 631 aa23.65■■□□□ 1.38
TCF3-216ENST00000592395 DDX46Q7L014 1031 aaKnown RBP23.65■■□□□ 1.38
TCF3-216ENST00000592395 JARID2Q92833 1246 aaPredicted RBP23.65■■□□□ 1.38
TCF3-216ENST00000592395 H7C1W4 665 aa23.64■■□□□ 1.37
TCF3-216ENST00000592395 NFKBIEO00221 500 aa23.64■■□□□ 1.37
TCF3-216ENST00000592395 PDE8AO60658 829 aa23.64■■□□□ 1.37
TCF3-216ENST00000592395 SLC4A10Q6U841 1118 aa23.64■■□□□ 1.37
TCF3-216ENST00000592395 TAF1P21675 1872 aa23.64■■□□□ 1.37
TCF3-216ENST00000592395 CCDC88AQ3V6T2 1871 aa23.64■■□□□ 1.37
TCF3-216ENST00000592395 PPEF1O14829 653 aaPredicted RBP23.63■■□□□ 1.37
TCF3-216ENST00000592395 RASSF7Q02833 373 aa23.63■■□□□ 1.37
TCF3-216ENST00000592395 UBE3BQ7Z3V4 1068 aa23.63■■□□□ 1.37
TCF3-216ENST00000592395 LTBP3Q9NS15 1303 aa23.62■■□□□ 1.37
TCF3-216ENST00000592395 ALDH1L1O75891 902 aa23.62■■□□□ 1.37
TCF3-216ENST00000592395 GRAPQ13588 217 aa23.62■■□□□ 1.37
TCF3-216ENST00000592395 CC2D2BQ6DHV5 1058 aa23.62■■□□□ 1.37
TCF3-216ENST00000592395 GRAPLQ8TC17 118 aaPredicted RBP23.62■■□□□ 1.37
TCF3-216ENST00000592395 SRCIN1Q9C0H9 1055 aa23.62■■□□□ 1.37
TCF3-216ENST00000592395 ABCB7O75027 752 aa23.61■■□□□ 1.37
TCF3-216ENST00000592395 BBOX1O75936 387 aa23.61■■□□□ 1.37
TCF3-216ENST00000592395 C9orf131Q5VYM1 1079 aa23.61■■□□□ 1.37
TCF3-216ENST00000592395 RTKN2Q8IZC4 609 aa23.61■■□□□ 1.37
TCF3-216ENST00000592395 TAOK3Q9H2K8 898 aa23.61■■□□□ 1.37
TCF3-216ENST00000592395 LMNB1P20700 586 aa23.6■■□□□ 1.37
TCF3-216ENST00000592395 CASP7P55210 303 aa23.6■■□□□ 1.37
TCF3-216ENST00000592395 CCDC152Q4G0S7 254 aa23.6■■□□□ 1.37
TCF3-216ENST00000592395 OLFM4Q6UX06 510 aa23.6■■□□□ 1.37
TCF3-216ENST00000592395 RNF181Q9P0P0 153 aa23.6■■□□□ 1.37
TCF3-216ENST00000592395 KIF16BQ96L93 1317 aa23.59■■□□□ 1.37
TCF3-216ENST00000592395 SNED1Q8TER0 1413 aa23.59■■□□□ 1.37
TCF3-216ENST00000592395 DICER1Q9UPY3 1922 aaKnown RBP23.59■■□□□ 1.37
TCF3-216ENST00000592395 CTSWP56202 376 aa23.59■■□□□ 1.37
TCF3-216ENST00000592395 GRIPAP1Q4V328 841 aa23.59■■□□□ 1.37
TCF3-216ENST00000592395 PLA2G12BQ9BX93 195 aa23.59■■□□□ 1.37
TCF3-216ENST00000592395 NOB1Q9ULX3 412 aaKnown RBP23.59■■□□□ 1.37
TCF3-216ENST00000592395 ATP6V0A2Q9Y487 856 aa23.59■■□□□ 1.37
TCF3-216ENST00000592395 MKRN4PQ13434 485 aaPredicted RBP23.58■■□□□ 1.37
TCF3-216ENST00000592395 TMC4Q7Z404 712 aa23.58■■□□□ 1.37
TCF3-216ENST00000592395 TMX4Q9H1E5 349 aaPredicted RBP23.58■■□□□ 1.37
TCF3-216ENST00000592395 LRRC37AA6NMS7 1700 aa23.58■■□□□ 1.37
TCF3-216ENST00000592395 TIAM2Q8IVF5 1701 aa23.57■■□□□ 1.36
TCF3-216ENST00000592395 GRM8O00222 908 aa23.57■■□□□ 1.36
TCF3-216ENST00000592395 PRELPP51888 382 aa23.57■■□□□ 1.36
TCF3-216ENST00000592395 FKBP4Q02790 459 aaKnown RBP eCLIP23.57■■□□□ 1.36
TCF3-216ENST00000592395 API5Q9BZZ5 524 aaKnown RBP23.57■■□□□ 1.36
TCF3-216ENST00000592395 ZNF784Q8NCA9 323 aaPredicted RBP23.56■■□□□ 1.36
TCF3-216ENST00000592395 TTLL11Q8NHH1 800 aa23.56■■□□□ 1.36
TCF3-216ENST00000592395 CELF1Q92879 486 aaKnown RBP23.56■■□□□ 1.36
TCF3-216ENST00000592395 C9orf78Q9NZ63 289 aaPredicted RBP23.56■■□□□ 1.36
TCF3-216ENST00000592395 COL4A1P02462 1669 aa23.56■■□□□ 1.36
TCF3-216ENST00000592395 RTL9Q8NET4 1388 aa23.55■■□□□ 1.36
TCF3-216ENST00000592395 SP8Q8IXZ3 490 aa23.55■■□□□ 1.36
TCF3-216ENST00000592395 ARHGAP45Q92619 1136 aa23.55■■□□□ 1.36
TCF3-216ENST00000592395 ZC3H4Q9UPT8 1303 aaKnown RBP23.55■■□□□ 1.36
TCF3-216ENST00000592395 RPS8P62241 208 aaKnown RBP23.54■■□□□ 1.36
TCF3-216ENST00000592395 CCDC85AQ96PX6 553 aaPredicted RBP23.54■■□□□ 1.36
TCF3-216ENST00000592395 PSMD1Q99460 953 aa23.54■■□□□ 1.36
TCF3-216ENST00000592395 SEC31BQ9NQW1 1179 aa23.54■■□□□ 1.36
TCF3-216ENST00000592395 BCAR3O75815 825 aa23.53■■□□□ 1.36
TCF3-216ENST00000592395 SLC51AQ86UW1 340 aa23.53■■□□□ 1.36
TCF3-216ENST00000592395 IPO8O15397 1037 aaKnown RBP23.52■■□□□ 1.36
TCF3-216ENST00000592395 CCT4P50991 539 aaKnown RBP23.52■■□□□ 1.36
TCF3-216ENST00000592395 GREM2Q9H772 168 aa23.52■■□□□ 1.36
TCF3-216ENST00000592395 UTYO14607 1347 aa23.52■■□□□ 1.36
TCF3-216ENST00000592395 CSF1RP07333 972 aa23.51■■□□□ 1.35
TCF3-216ENST00000592395 CDC5LQ99459 802 aaKnown RBP23.51■■□□□ 1.35
TCF3-216ENST00000592395 ZNF277Q9NRM2 450 aaPredicted RBP23.51■■□□□ 1.35
TCF3-216ENST00000592395 SPEF2Q9C093 1822 aa23.5■■□□□ 1.35
TCF3-216ENST00000592395 ANKRD18AQ8IVF6 992 aa23.5■■□□□ 1.35
TCF3-216ENST00000592395 NBPF7P0C2Y1 421 aaPredicted RBP23.49■■□□□ 1.35
TCF3-216ENST00000592395 FOXO4P98177 505 aa23.49■■□□□ 1.35
TCF3-216ENST00000592395 DPP8Q6V1X1 898 aaPredicted RBP23.49■■□□□ 1.35
TCF3-216ENST00000592395 MPNDQ8N594 471 aa23.49■■□□□ 1.35
TCF3-216ENST00000592395 FRAT1Q92837 279 aaPredicted RBP23.49■■□□□ 1.35
TCF3-216ENST00000592395 DSG3P32926 999 aa23.48■■□□□ 1.35
TCF3-216ENST00000592395 IARSP41252 1262 aaKnown RBP23.48■■□□□ 1.35
TCF3-216ENST00000592395 FAM161AQ3B820 660 aa23.48■■□□□ 1.35
TCF3-216ENST00000592395 ATF7IPQ6VMQ6 1270 aa23.48■■□□□ 1.35
TCF3-216ENST00000592395 SUPT20HQ8NEM7 779 aa23.48■■□□□ 1.35
TCF3-216ENST00000592395 RTFDC1Q9BY42 306 aaPredicted RBP23.48■■□□□ 1.35
TCF3-216ENST00000592395 LTBP1Q14766 1721 aa23.47■■□□□ 1.35
TCF3-216ENST00000592395 ITGA6P23229 1130 aa23.47■■□□□ 1.35
TCF3-216ENST00000592395 SUCLG2Q96I99 432 aa23.47■■□□□ 1.35
TCF3-216ENST00000592395 USP44Q9H0E7 712 aa23.47■■□□□ 1.35
TCF3-216ENST00000592395 DUOX1Q9NRD9 1551 aa23.47■■□□□ 1.35
TCF3-216ENST00000592395 TRIM27P14373 513 aa23.46■■□□□ 1.35
TCF3-216ENST00000592395 EPHA10Q5JZY3 1008 aa23.46■■□□□ 1.35
TCF3-216ENST00000592395 ZNF526Q8TF50 670 aaPredicted RBP23.46■■□□□ 1.35
TCF3-216ENST00000592395 VPS33BQ9H267 617 aa23.46■■□□□ 1.35
TCF3-216ENST00000592395 GPBP1L1Q9HC44 474 aaPredicted RBP23.46■■□□□ 1.35
TCF3-216ENST00000592395 CACNB1Q02641 598 aaPredicted RBP23.45■■□□□ 1.34
TCF3-216ENST00000592395 ZKSCAN2Q63HK3 967 aa23.45■■□□□ 1.34
TCF3-216ENST00000592395 INTS3Q68E01 1043 aaKnown RBP23.45■■□□□ 1.34
TCF3-216ENST00000592395 LMBR1LQ6UX01 489 aa23.45■■□□□ 1.34
TCF3-216ENST00000592395 NSFL1CQ9UNZ2 370 aaKnown RBP23.45■■□□□ 1.34
TCF3-216ENST00000592395 ANKRD18BA2A2Z9 1011 aa23.44■■□□□ 1.34
TCF3-216ENST00000592395 IGHMBP2P38935 993 aaKnown RBP23.44■■□□□ 1.34
TCF3-216ENST00000592395 IFIT5Q13325 482 aaKnown RBP23.44■■□□□ 1.34
TCF3-216ENST00000592395 KAZALD1Q96I82 304 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms