RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 GZF1Q9H116 711 aaPredicted RBP16.5■□□□□ 0.23
GFAP-221ENST00000592065 PIM2Q9P1W9 311 aa16.5■□□□□ 0.23
GFAP-221ENST00000592065 GTF2E1P29083 439 aaPredicted RBP16.49■□□□□ 0.23
GFAP-221ENST00000592065 GIGYF2Q6Y7W6 1299 aaKnown RBP16.49■□□□□ 0.23
GFAP-221ENST00000592065 G2E3Q7L622 706 aa16.49■□□□□ 0.23
GFAP-221ENST00000592065 SIRT2Q8IXJ6 389 aa16.49■□□□□ 0.23
GFAP-221ENST00000592065 JARID2Q92833 1246 aaPredicted RBP16.49■□□□□ 0.23
GFAP-221ENST00000592065 CHD4Q14839 1912 aa16.49■□□□□ 0.23
GFAP-221ENST00000592065 ARHGAP27Q6ZUM4 889 aa16.49■□□□□ 0.23
GFAP-221ENST00000592065 DBF4Q9UBU7 674 aaPredicted RBP16.49■□□□□ 0.23
GFAP-221ENST00000592065 ZMYND15Q9H091 742 aa16.48■□□□□ 0.23
GFAP-221ENST00000592065 ERBB4Q15303 1308 aa16.47■□□□□ 0.23
GFAP-221ENST00000592065 MRE11P49959 708 aa16.47■□□□□ 0.23
GFAP-221ENST00000592065 RASSF7Q02833 373 aa16.47■□□□□ 0.23
GFAP-221ENST00000592065 DALRD3Q5D0E6 543 aaKnown RBP16.47■□□□□ 0.23
GFAP-221ENST00000592065 C1orf115Q9H7X2 142 aa16.47■□□□□ 0.23
GFAP-221ENST00000592065 ISY1Q9ULR0 285 aaKnown RBP16.47■□□□□ 0.23
GFAP-221ENST00000592065 ERVV-1B6SEH8 477 aa16.47■□□□□ 0.23
GFAP-221ENST00000592065 H0YIN7 160 aa16.47■□□□□ 0.23
GFAP-221ENST00000592065 ST5P78524 1137 aa16.47■□□□□ 0.23
GFAP-221ENST00000592065 RAB3GAP1Q15042 981 aa16.47■□□□□ 0.23
GFAP-221ENST00000592065 TBC1D9Q6ZT07 1266 aa16.47■□□□□ 0.23
GFAP-221ENST00000592065 ZNF34Q8IZ26 560 aa16.47■□□□□ 0.23
GFAP-221ENST00000592065 TNPO1Q92973 898 aaKnown RBP16.47■□□□□ 0.23
GFAP-221ENST00000592065 PANK2Q9BZ23 570 aa16.47■□□□□ 0.23
GFAP-221ENST00000592065 TPTE2Q6XPS3 522 aa16.46■□□□□ 0.23
GFAP-221ENST00000592065 BRIP1Q9BX63 1249 aa16.46■□□□□ 0.23
GFAP-221ENST00000592065 C21orf2O43822 256 aa16.46■□□□□ 0.22
GFAP-221ENST00000592065 HCLS1P14317 486 aaPredicted RBP16.46■□□□□ 0.22
GFAP-221ENST00000592065 ANKRD13DQ6ZTN6 518 aa16.46■□□□□ 0.22
GFAP-221ENST00000592065 ATP10DQ9P241 1426 aa16.45■□□□□ 0.22
GFAP-221ENST00000592065 GRIN3BO60391 1043 aa16.45■□□□□ 0.22
GFAP-221ENST00000592065 NTSR2O95665 410 aa16.45■□□□□ 0.22
GFAP-221ENST00000592065 ZNF784Q8NCA9 323 aaPredicted RBP16.45■□□□□ 0.22
GFAP-221ENST00000592065 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
GFAP-221ENST00000592065 HOXB7P09629 217 aa16.45■□□□□ 0.22
GFAP-221ENST00000592065 PRELPP51888 382 aa16.45■□□□□ 0.22
GFAP-221ENST00000592065 SRGNP10124 158 aa16.44■□□□□ 0.22
GFAP-221ENST00000592065 ARFGEF2Q9Y6D5 1785 aa16.44■□□□□ 0.22
GFAP-221ENST00000592065 CD2BP2O95400 341 aaKnown RBP16.44■□□□□ 0.22
GFAP-221ENST00000592065 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
GFAP-221ENST00000592065 NLRP10Q86W26 655 aa16.44■□□□□ 0.22
GFAP-221ENST00000592065 FAM89AQ96GI7 184 aa16.44■□□□□ 0.22
GFAP-221ENST00000592065 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
GFAP-221ENST00000592065 RIC3Q7Z5B4 369 aa16.43■□□□□ 0.22
GFAP-221ENST00000592065 TTLL6Q8N841 843 aa16.43■□□□□ 0.22
GFAP-221ENST00000592065 GBP4Q96PP9 640 aa16.43■□□□□ 0.22
GFAP-221ENST00000592065 DLEC1Q9Y238 1755 aa16.43■□□□□ 0.22
GFAP-221ENST00000592065 TAF1P21675 1872 aa16.43■□□□□ 0.22
GFAP-221ENST00000592065 K7ELQ4 463 aaPredicted RBP16.43■□□□□ 0.22
GFAP-221ENST00000592065 PDE6BP35913 854 aa16.43■□□□□ 0.22
GFAP-221ENST00000592065 PRPF40BQ6NWY9 871 aaKnown RBP16.43■□□□□ 0.22
GFAP-221ENST00000592065 MYD88Q99836 296 aa16.43■□□□□ 0.22
GFAP-221ENST00000592065 GRPEL1Q9HAV7 217 aa16.43■□□□□ 0.22
GFAP-221ENST00000592065 HYPKQ9NX55 129 aa16.43■□□□□ 0.22
GFAP-221ENST00000592065 TCIRG1Q13488 830 aa16.42■□□□□ 0.22
GFAP-221ENST00000592065 CCDC30Q5VVM6 783 aa16.42■□□□□ 0.22
GFAP-221ENST00000592065 PLBD2Q8NHP8 589 aa16.42■□□□□ 0.22
GFAP-221ENST00000592065 TRMT112Q9UI30 125 aaKnown RBP16.42■□□□□ 0.22
GFAP-221ENST00000592065 ANKRD36CQ5JPF3 1778 aa16.42■□□□□ 0.22
GFAP-221ENST00000592065 PI4KAP2A4QPH2 592 aa16.42■□□□□ 0.22
GFAP-221ENST00000592065 CDC45O75419 566 aa16.42■□□□□ 0.22
GFAP-221ENST00000592065 PI4KAP1Q8N8J0 262 aa16.42■□□□□ 0.22
GFAP-221ENST00000592065 MAP3K2Q9Y2U5 619 aa16.41■□□□□ 0.22
GFAP-221ENST00000592065 ARFGEF1Q9Y6D6 1849 aa16.41■□□□□ 0.22
GFAP-221ENST00000592065 CWF19L2Q2TBE0 894 aaKnown RBP16.41■□□□□ 0.22
GFAP-221ENST00000592065 CCDC85AQ96PX6 553 aaPredicted RBP16.41■□□□□ 0.22
GFAP-221ENST00000592065 COL4A1P02462 1669 aa16.4■□□□□ 0.22
GFAP-221ENST00000592065 F6X3S4 739 aa16.4■□□□□ 0.22
GFAP-221ENST00000592065 PTMSP20962 102 aa16.4■□□□□ 0.22
GFAP-221ENST00000592065 SKOR2Q2VWA4 1001 aaPredicted RBP16.4■□□□□ 0.22
GFAP-221ENST00000592065 UTP14AQ9BVJ6 771 aaKnown RBP16.4■□□□□ 0.22
GFAP-221ENST00000592065 STK31Q9BXU1 1019 aa16.4■□□□□ 0.22
GFAP-221ENST00000592065 ADCY9O60503 1353 aa16.4■□□□□ 0.22
GFAP-221ENST00000592065 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
GFAP-221ENST00000592065 DCTPP1Q9H773 170 aa16.4■□□□□ 0.22
GFAP-221ENST00000592065 NFKBIEO00221 500 aa16.39■□□□□ 0.21
GFAP-221ENST00000592065 CLEC17AQ6ZS10 378 aa16.39■□□□□ 0.21
GFAP-221ENST00000592065 PLEKHM2Q8IWE5 1019 aa16.39■□□□□ 0.21
GFAP-221ENST00000592065 CLCN1P35523 988 aa16.39■□□□□ 0.21
GFAP-221ENST00000592065 MASTLQ96GX5 879 aa16.39■□□□□ 0.21
GFAP-221ENST00000592065 C9orf131Q5VYM1 1079 aa16.38■□□□□ 0.21
GFAP-221ENST00000592065 INTS3Q68E01 1043 aaKnown RBP16.38■□□□□ 0.21
GFAP-221ENST00000592065 FLIIQ13045 1269 aa16.38■□□□□ 0.21
GFAP-221ENST00000592065 FKBP5Q13451 457 aaPredicted RBP16.38■□□□□ 0.21
GFAP-221ENST00000592065 PPP1R42Q7Z4L9 355 aa16.38■□□□□ 0.21
GFAP-221ENST00000592065 NYXQ9GZU5 481 aa16.38■□□□□ 0.21
GFAP-221ENST00000592065 RNF181Q9P0P0 153 aa16.38■□□□□ 0.21
GFAP-221ENST00000592065 ISCA1Q9BUE6 129 aa16.37■□□□□ 0.21
GFAP-221ENST00000592065 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
GFAP-221ENST00000592065 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
GFAP-221ENST00000592065 IGKV5-2P06315 115 aa16.36■□□□□ 0.21
GFAP-221ENST00000592065 PARP10Q53GL7 1025 aa16.36■□□□□ 0.21
GFAP-221ENST00000592065 TTC22Q5TAA0 569 aa16.36■□□□□ 0.21
GFAP-221ENST00000592065 LAMB2P55268 1798 aa16.36■□□□□ 0.21
GFAP-221ENST00000592065 GAS2L3Q86XJ1 694 aa16.36■□□□□ 0.21
GFAP-221ENST00000592065 RPGRQ92834 1020 aaKnown RBP16.36■□□□□ 0.21
GFAP-221ENST00000592065 SBF1O95248 1867 aa16.35■□□□□ 0.21
GFAP-221ENST00000592065 SH3TC1Q8TE82 1336 aa16.35■□□□□ 0.21
GFAP-221ENST00000592065 KLRG2A4D1S0 409 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms