RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 FLIIQ13045 1269 aa19.47■□□□□ 0.71
ERCC1-213ENST00000592023 SF3B3Q15393 1217 aaKnown RBP19.47■□□□□ 0.71
ERCC1-213ENST00000592023 ZNF521Q96K83 1311 aa19.47■□□□□ 0.71
ERCC1-213ENST00000592023 CACNA1FO60840 1977 aa19.46■□□□□ 0.71
ERCC1-213ENST00000592023 DUOX1Q9NRD9 1551 aa19.46■□□□□ 0.71
ERCC1-213ENST00000592023 POTECB2RU33 542 aa19.46■□□□□ 0.71
ERCC1-213ENST00000592023 IGKV5-2P06315 115 aa19.46■□□□□ 0.71
ERCC1-213ENST00000592023 NEXNQ0ZGT2 675 aa19.46■□□□□ 0.71
ERCC1-213ENST00000592023 LARGE2Q8N3Y3 721 aa19.46■□□□□ 0.71
ERCC1-213ENST00000592023 JDP2Q8WYK2 163 aa19.46■□□□□ 0.71
ERCC1-213ENST00000592023 CELF1Q92879 486 aaKnown RBP19.46■□□□□ 0.71
ERCC1-213ENST00000592023 PPIP5K2O43314 1243 aa19.45■□□□□ 0.7
ERCC1-213ENST00000592023 FKBP5Q13451 457 aaPredicted RBP19.45■□□□□ 0.7
ERCC1-213ENST00000592023 CWF19L2Q2TBE0 894 aaKnown RBP19.45■□□□□ 0.7
ERCC1-213ENST00000592023 DPP8Q6V1X1 898 aaPredicted RBP19.45■□□□□ 0.7
ERCC1-213ENST00000592023 SP8Q8IXZ3 490 aa19.45■□□□□ 0.7
ERCC1-213ENST00000592023 FZD9O00144 591 aa19.44■□□□□ 0.7
ERCC1-213ENST00000592023 HSP90B1P14625 803 aaKnown RBP19.44■□□□□ 0.7
ERCC1-213ENST00000592023 FSTL1Q12841 308 aa19.44■□□□□ 0.7
ERCC1-213ENST00000592023 AOC3Q16853 763 aa19.44■□□□□ 0.7
ERCC1-213ENST00000592023 MPNDQ8N594 471 aa19.44■□□□□ 0.7
ERCC1-213ENST00000592023 SMC1BQ8NDV3 1235 aa19.44■□□□□ 0.7
ERCC1-213ENST00000592023 SCN4AP35499 1836 aa19.44■□□□□ 0.7
ERCC1-213ENST00000592023 NEURL1BA8MQ27 555 aa19.43■□□□□ 0.7
ERCC1-213ENST00000592023 PDE8AO60658 829 aa19.43■□□□□ 0.7
ERCC1-213ENST00000592023 TMC4Q7Z404 712 aa19.43■□□□□ 0.7
ERCC1-213ENST00000592023 NIM1KQ8IY84 436 aa19.43■□□□□ 0.7
ERCC1-213ENST00000592023 SUPT20HQ8NEM7 779 aa19.43■□□□□ 0.7
ERCC1-213ENST00000592023 CCDC85AQ96PX6 553 aaPredicted RBP19.43■□□□□ 0.7
ERCC1-213ENST00000592023 CDHR2Q9BYE9 1310 aa19.43■□□□□ 0.7
ERCC1-213ENST00000592023 MYH3P11055 1940 aa19.43■□□□□ 0.7
ERCC1-213ENST00000592023 CCER2I3L3R5 266 aa19.42■□□□□ 0.7
ERCC1-213ENST00000592023 EIF6P56537 245 aaKnown RBP19.42■□□□□ 0.7
ERCC1-213ENST00000592023 L3MBTL3Q96JM7 780 aaPredicted RBP19.42■□□□□ 0.7
ERCC1-213ENST00000592023 IQCA1LA6NCM1 817 aa19.41■□□□□ 0.7
ERCC1-213ENST00000592023 CCDC152Q4G0S7 254 aa19.41■□□□□ 0.7
ERCC1-213ENST00000592023 DNAAF4Q8WXU2 420 aa19.41■□□□□ 0.7
ERCC1-213ENST00000592023 RTFDC1Q9BY42 306 aaPredicted RBP19.41■□□□□ 0.7
ERCC1-213ENST00000592023 SEC31BQ9NQW1 1179 aa19.41■□□□□ 0.7
ERCC1-213ENST00000592023 LTBP1Q14766 1721 aa19.41■□□□□ 0.7
ERCC1-213ENST00000592023 SPEF2Q9C093 1822 aa19.4■□□□□ 0.7
ERCC1-213ENST00000592023 APLP1P51693 650 aa19.4■□□□□ 0.7
ERCC1-213ENST00000592023 GJA3Q9Y6H8 435 aa19.4■□□□□ 0.7
ERCC1-213ENST00000592023 POTEIP0CG38 1075 aa19.39■□□□□ 0.69
ERCC1-213ENST00000592023 POTEJP0CG39 1038 aa19.39■□□□□ 0.69
ERCC1-213ENST00000592023 CTSWP56202 376 aa19.39■□□□□ 0.69
ERCC1-213ENST00000592023 UBE3BQ7Z3V4 1068 aa19.39■□□□□ 0.69
ERCC1-213ENST00000592023 GPC2Q8N158 579 aa19.39■□□□□ 0.69
ERCC1-213ENST00000592023 F6X3S4 739 aa19.38■□□□□ 0.69
ERCC1-213ENST00000592023 RPS8P62241 208 aaKnown RBP19.38■□□□□ 0.69
ERCC1-213ENST00000592023 VPS33BQ9H267 617 aa19.38■□□□□ 0.69
ERCC1-213ENST00000592023 TAF1DQ9H5J8 278 aaPredicted RBP19.38■□□□□ 0.69
ERCC1-213ENST00000592023 HACL1Q9UJ83 578 aa19.38■□□□□ 0.69
ERCC1-213ENST00000592023 NSFL1CQ9UNZ2 370 aaKnown RBP19.38■□□□□ 0.69
ERCC1-213ENST00000592023 E9PSI1 815 aa19.37■□□□□ 0.69
ERCC1-213ENST00000592023 GPSM2P81274 684 aa19.37■□□□□ 0.69
ERCC1-213ENST00000592023 KIAA2012Q0VF49 1180 aa19.37■□□□□ 0.69
ERCC1-213ENST00000592023 GCKRQ14397 625 aa19.37■□□□□ 0.69
ERCC1-213ENST00000592023 LINS1Q8NG48 757 aa19.37■□□□□ 0.69
ERCC1-213ENST00000592023 EPHX2P34913 555 aa19.36■□□□□ 0.69
ERCC1-213ENST00000592023 HTRA3P83110 453 aa19.36■□□□□ 0.69
ERCC1-213ENST00000592023 EAPPQ56P03 285 aaPredicted RBP19.36■□□□□ 0.69
ERCC1-213ENST00000592023 ADAMTSL1Q8N6G6 1762 aa19.36■□□□□ 0.69
ERCC1-213ENST00000592023 H7C1W4 665 aa19.35■□□□□ 0.69
ERCC1-213ENST00000592023 CHADLQ6NUI6 762 aa19.35■□□□□ 0.69
ERCC1-213ENST00000592023 ANKRD18AQ8IVF6 992 aa19.35■□□□□ 0.69
ERCC1-213ENST00000592023 ZNRF3Q9ULT6 936 aa19.35■□□□□ 0.69
ERCC1-213ENST00000592023 C6orf229H3BNL8 230 aa19.34■□□□□ 0.69
ERCC1-213ENST00000592023 LMOD1P29536 600 aaPredicted RBP19.34■□□□□ 0.69
ERCC1-213ENST00000592023 SLFN5Q08AF3 891 aa19.34■□□□□ 0.69
ERCC1-213ENST00000592023 LDHDQ86WU2 507 aa19.34■□□□□ 0.69
ERCC1-213ENST00000592023 TTLL11Q8NHH1 800 aa19.34■□□□□ 0.69
ERCC1-213ENST00000592023 CDCA7LQ96GN5 454 aa19.34■□□□□ 0.69
ERCC1-213ENST00000592023 GPR101Q96P66 508 aaPredicted RBP19.34■□□□□ 0.69
ERCC1-213ENST00000592023 GREM2Q9H772 168 aa19.34■□□□□ 0.69
ERCC1-213ENST00000592023 RIMBP2O15034 1052 aa19.33■□□□□ 0.68
ERCC1-213ENST00000592023 SCNN1DP51172 638 aa19.33■□□□□ 0.68
ERCC1-213ENST00000592023 WASHC4Q2M389 1173 aa19.33■□□□□ 0.68
ERCC1-213ENST00000592023 CDC5LQ99459 802 aaKnown RBP19.33■□□□□ 0.68
ERCC1-213ENST00000592023 POLLQ9UGP5 575 aa19.33■□□□□ 0.68
ERCC1-213ENST00000592023 RTL9Q8NET4 1388 aa19.32■□□□□ 0.68
ERCC1-213ENST00000592023 UFL1O94874 794 aa19.32■□□□□ 0.68
ERCC1-213ENST00000592023 CASP7P55210 303 aa19.32■□□□□ 0.68
ERCC1-213ENST00000592023 CXCL9Q07325 125 aa19.32■□□□□ 0.68
ERCC1-213ENST00000592023 BEND3Q5T5X7 828 aa19.32■□□□□ 0.68
ERCC1-213ENST00000592023 TBC1D16Q8TBP0 767 aa19.32■□□□□ 0.68
ERCC1-213ENST00000592023 ANKIB1Q9P2G1 1089 aa19.32■□□□□ 0.68
ERCC1-213ENST00000592023 YDJCA8MPS7 323 aa19.31■□□□□ 0.68
ERCC1-213ENST00000592023 RAD17O75943 681 aa19.31■□□□□ 0.68
ERCC1-213ENST00000592023 FAM161AQ3B820 660 aa19.31■□□□□ 0.68
ERCC1-213ENST00000592023 DIEXFQ68CQ4 756 aaKnown RBP19.31■□□□□ 0.68
ERCC1-213ENST00000592023 CIAPIN1Q6FI81 312 aa19.31■□□□□ 0.68
ERCC1-213ENST00000592023 SLC4A10Q6U841 1118 aa19.31■□□□□ 0.68
ERCC1-213ENST00000592023 EYA3Q99504 573 aa19.31■□□□□ 0.68
ERCC1-213ENST00000592023 PLA2G12BQ9BX93 195 aa19.31■□□□□ 0.68
ERCC1-213ENST00000592023 DBNDD1Q9H9R9 158 aa19.31■□□□□ 0.68
ERCC1-213ENST00000592023 CLEC11AQ9Y240 323 aa19.31■□□□□ 0.68
ERCC1-213ENST00000592023 EPS15P42566 896 aa19.3■□□□□ 0.68
ERCC1-213ENST00000592023 PNMA8AQ86V59 439 aaPredicted RBP19.3■□□□□ 0.68
ERCC1-213ENST00000592023 BCL2L13Q9BXK5 485 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms