RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 USP50Q70EL3 339 aaPredicted RBP25.42■■□□□ 1.66
TNFRSF11A-204ENST00000592013 STK31Q9BXU1 1019 aa25.42■■□□□ 1.66
TNFRSF11A-204ENST00000592013 PASKQ96RG2 1323 aa25.41■■□□□ 1.66
TNFRSF11A-204ENST00000592013 CDHR2Q9BYE9 1310 aa25.41■■□□□ 1.66
TNFRSF11A-204ENST00000592013 POTEIP0CG38 1075 aa25.41■■□□□ 1.66
TNFRSF11A-204ENST00000592013 POTEJP0CG39 1038 aa25.41■■□□□ 1.66
TNFRSF11A-204ENST00000592013 KIAA2012Q0VF49 1180 aa25.41■■□□□ 1.66
TNFRSF11A-204ENST00000592013 ZBTB38Q8NAP3 1195 aaPredicted RBP25.41■■□□□ 1.66
TNFRSF11A-204ENST00000592013 CCDC191Q8NCU4 936 aa25.41■■□□□ 1.66
TNFRSF11A-204ENST00000592013 FAM89AQ96GI7 184 aa25.41■■□□□ 1.66
TNFRSF11A-204ENST00000592013 ELL2O00472 640 aaPredicted RBP25.4■■□□□ 1.66
TNFRSF11A-204ENST00000592013 IRS4O14654 1257 aaPredicted RBP25.4■■□□□ 1.66
TNFRSF11A-204ENST00000592013 CNTROBQ8N137 903 aa25.4■■□□□ 1.66
TNFRSF11A-204ENST00000592013 LAMB2P55268 1798 aa25.39■■□□□ 1.66
TNFRSF11A-204ENST00000592013 EYA3Q99504 573 aa25.38■■□□□ 1.65
TNFRSF11A-204ENST00000592013 IL16Q14005 1332 aa25.37■■□□□ 1.65
TNFRSF11A-204ENST00000592013 ITGBL1O95965 494 aaPredicted RBP25.37■■□□□ 1.65
TNFRSF11A-204ENST00000592013 NEXNQ0ZGT2 675 aa25.37■■□□□ 1.65
TNFRSF11A-204ENST00000592013 CIAPIN1Q6FI81 312 aa25.37■■□□□ 1.65
TNFRSF11A-204ENST00000592013 MRS2Q9HD23 443 aa25.37■■□□□ 1.65
TNFRSF11A-204ENST00000592013 ADARB2Q9NS39 739 aaKnown RBP25.37■■□□□ 1.65
TNFRSF11A-204ENST00000592013 CWC25Q9NXE8 425 aaPredicted RBP25.37■■□□□ 1.65
TNFRSF11A-204ENST00000592013 SCNN1DP51172 638 aa25.36■■□□□ 1.65
TNFRSF11A-204ENST00000592013 CCDC152Q4G0S7 254 aa25.36■■□□□ 1.65
TNFRSF11A-204ENST00000592013 C8orf58Q8NAV2 365 aa25.36■■□□□ 1.65
TNFRSF11A-204ENST00000592013 ADAMTSL1Q8N6G6 1762 aa25.36■■□□□ 1.65
TNFRSF11A-204ENST00000592013 PCCAP05165 728 aaPredicted RBP25.35■■□□□ 1.65
TNFRSF11A-204ENST00000592013 WASHC4Q2M389 1173 aa25.35■■□□□ 1.65
TNFRSF11A-204ENST00000592013 MYD88Q99836 296 aa25.35■■□□□ 1.65
TNFRSF11A-204ENST00000592013 BCL2L13Q9BXK5 485 aa25.35■■□□□ 1.65
TNFRSF11A-204ENST00000592013 PHAXQ9H814 394 aaKnown RBP25.35■■□□□ 1.65
TNFRSF11A-204ENST00000592013 GPRC5DQ9NZD1 345 aa25.35■■□□□ 1.65
TNFRSF11A-204ENST00000592013 NSFL1CQ9UNZ2 370 aaKnown RBP25.35■■□□□ 1.65
TNFRSF11A-204ENST00000592013 CNTNAP1P78357 1384 aa25.34■■□□□ 1.65
TNFRSF11A-204ENST00000592013 COL4A5P29400 1685 aa25.34■■□□□ 1.65
TNFRSF11A-204ENST00000592013 ZNF316A6NFI3 1004 aaPredicted RBP25.34■■□□□ 1.65
TNFRSF11A-204ENST00000592013 RPS8P62241 208 aaKnown RBP25.34■■□□□ 1.65
TNFRSF11A-204ENST00000592013 CXCL9Q07325 125 aa25.34■■□□□ 1.65
TNFRSF11A-204ENST00000592013 MAP1SQ66K74 1059 aaPredicted RBP25.34■■□□□ 1.65
TNFRSF11A-204ENST00000592013 WWC1Q8IX03 1113 aa25.34■■□□□ 1.65
TNFRSF11A-204ENST00000592013 METTL22Q9BUU2 404 aaPredicted RBP25.34■■□□□ 1.65
TNFRSF11A-204ENST00000592013 MKRN1Q9UHC7 482 aaKnown RBP25.34■■□□□ 1.65
TNFRSF11A-204ENST00000592013 DDX60Q8IY21 1712 aaKnown RBP25.34■■□□□ 1.65
TNFRSF11A-204ENST00000592013 LRRC37AA6NMS7 1700 aa25.32■■□□□ 1.64
TNFRSF11A-204ENST00000592013 C6orf229H3BNL8 230 aa25.32■■□□□ 1.64
TNFRSF11A-204ENST00000592013 PDE8AO60658 829 aa25.32■■□□□ 1.64
TNFRSF11A-204ENST00000592013 HSPA1AP0DMV8 641 aaKnown RBP25.32■■□□□ 1.64
TNFRSF11A-204ENST00000592013 HSPA1BP0DMV9 641 aaKnown RBP25.32■■□□□ 1.64
TNFRSF11A-204ENST00000592013 EPS15P42566 896 aa25.32■■□□□ 1.64
TNFRSF11A-204ENST00000592013 RTL5Q5HYW3 569 aaPredicted RBP25.32■■□□□ 1.64
TNFRSF11A-204ENST00000592013 KSR2Q6VAB6 950 aa25.32■■□□□ 1.64
TNFRSF11A-204ENST00000592013 TWISTNBQ3B726 338 aaPredicted RBP25.31■■□□□ 1.64
TNFRSF11A-204ENST00000592013 ZC3H15Q8WU90 426 aaKnown RBP25.31■■□□□ 1.64
TNFRSF11A-204ENST00000592013 G3V3G9 751 aa25.3■■□□□ 1.64
TNFRSF11A-204ENST00000592013 H7C1D1 291 aa25.3■■□□□ 1.64
TNFRSF11A-204ENST00000592013 DCAF8Q5TAQ9 597 aa25.3■■□□□ 1.64
TNFRSF11A-204ENST00000592013 CELF1Q92879 486 aaKnown RBP25.3■■□□□ 1.64
TNFRSF11A-204ENST00000592013 AIDAQ96BJ3 306 aa25.3■■□□□ 1.64
TNFRSF11A-204ENST00000592013 GMPSP49915 693 aaPredicted RBP25.29■■□□□ 1.64
TNFRSF11A-204ENST00000592013 ABT1Q9ULW3 272 aaKnown RBP25.29■■□□□ 1.64
TNFRSF11A-204ENST00000592013 MAP3K2Q9Y2U5 619 aa25.29■■□□□ 1.64
TNFRSF11A-204ENST00000592013 DEFB115Q30KQ5 88 aa25.28■■□□□ 1.64
TNFRSF11A-204ENST00000592013 WDR63Q8IWG1 891 aa25.28■■□□□ 1.64
TNFRSF11A-204ENST00000592013 TSR2Q969E8 191 aaKnown RBP25.28■■□□□ 1.64
TNFRSF11A-204ENST00000592013 CDC5LQ99459 802 aaKnown RBP25.28■■□□□ 1.64
TNFRSF11A-204ENST00000592013 ZC3H12CQ9C0D7 883 aaKnown RBP25.28■■□□□ 1.64
TNFRSF11A-204ENST00000592013 ANKIB1Q9P2G1 1089 aa25.28■■□□□ 1.64
TNFRSF11A-204ENST00000592013 RASSF10A6NK89 507 aa25.27■■□□□ 1.64
TNFRSF11A-204ENST00000592013 RAD17O75943 681 aa25.27■■□□□ 1.64
TNFRSF11A-204ENST00000592013 RPS12P25398 132 aaKnown RBP25.27■■□□□ 1.64
TNFRSF11A-204ENST00000592013 DPF2Q92785 391 aa25.27■■□□□ 1.64
TNFRSF11A-204ENST00000592013 ZNF428Q96B54 188 aa25.27■■□□□ 1.64
TNFRSF11A-204ENST00000592013 PODXL2Q9NZ53 605 aa25.27■■□□□ 1.64
TNFRSF11A-204ENST00000592013 PI4KAP2A4QPH2 592 aa25.26■■□□□ 1.63
TNFRSF11A-204ENST00000592013 ECE1P42892 770 aa25.26■■□□□ 1.63
TNFRSF11A-204ENST00000592013 ANKRD18AQ8IVF6 992 aa25.26■■□□□ 1.63
TNFRSF11A-204ENST00000592013 TSPYL6Q8N831 410 aa25.26■■□□□ 1.63
TNFRSF11A-204ENST00000592013 PI4KAP1Q8N8J0 262 aa25.26■■□□□ 1.63
TNFRSF11A-204ENST00000592013 GPSM2P81274 684 aa25.25■■□□□ 1.63
TNFRSF11A-204ENST00000592013 GGA1Q9UJY5 639 aa25.25■■□□□ 1.63
TNFRSF11A-204ENST00000592013 SLC4A2P04920 1241 aa25.24■■□□□ 1.63
TNFRSF11A-204ENST00000592013 CCDC184Q52MB2 194 aa25.24■■□□□ 1.63
TNFRSF11A-204ENST00000592013 SLC51AQ86UW1 340 aa25.24■■□□□ 1.63
TNFRSF11A-204ENST00000592013 TBC1D16Q8TBP0 767 aa25.24■■□□□ 1.63
TNFRSF11A-204ENST00000592013 MYH16Q9H6N6 1097 aa25.24■■□□□ 1.63
TNFRSF11A-204ENST00000592013 CNOT7Q9UIV1 285 aaKnown RBP25.24■■□□□ 1.63
TNFRSF11A-204ENST00000592013 LTBP1Q14766 1721 aa25.23■■□□□ 1.63
TNFRSF11A-204ENST00000592013 DUOX1Q9NRD9 1551 aa25.23■■□□□ 1.63
TNFRSF11A-204ENST00000592013 POLLQ9UGP5 575 aa25.23■■□□□ 1.63
TNFRSF11A-204ENST00000592013 RIMBP2O15034 1052 aa25.22■■□□□ 1.63
TNFRSF11A-204ENST00000592013 VEGFBP49765 207 aa25.22■■□□□ 1.63
TNFRSF11A-204ENST00000592013 CTSWP56202 376 aa25.22■■□□□ 1.63
TNFRSF11A-204ENST00000592013 MAP2K1Q02750 393 aaPredicted RBP25.22■■□□□ 1.63
TNFRSF11A-204ENST00000592013 CDC37L1Q7L3B6 337 aa25.22■■□□□ 1.63
TNFRSF11A-204ENST00000592013 TNS4Q8IZW8 715 aa25.22■■□□□ 1.63
TNFRSF11A-204ENST00000592013 PGAP2Q9UHJ9 254 aa25.22■■□□□ 1.63
TNFRSF11A-204ENST00000592013 XDHP47989 1333 aa25.21■■□□□ 1.63
TNFRSF11A-204ENST00000592013 ECE2O60344 883 aa25.21■■□□□ 1.63
TNFRSF11A-204ENST00000592013 UFL1O94874 794 aa25.21■■□□□ 1.63
TNFRSF11A-204ENST00000592013 DBNDD1Q9H9R9 158 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms