RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 USP5P45974 858 aa6.24□□□□□ -1.41
VMP1-212ENST00000591782 TRIM26Q12899 539 aaPredicted RBP6.24□□□□□ -1.41
VMP1-212ENST00000591782 LYPD4Q6UWN0 246 aa6.24□□□□□ -1.41
VMP1-212ENST00000591782 ZNF438Q7Z4V0 828 aa6.24□□□□□ -1.41
VMP1-212ENST00000591782 NLRP13Q86W25 1043 aa6.24□□□□□ -1.41
VMP1-212ENST00000591782 GJD3Q8N144 294 aa6.24□□□□□ -1.41
VMP1-212ENST00000591782 GOLGA6L1Q8N7Z2 621 aa6.24□□□□□ -1.41
VMP1-212ENST00000591782 DCTN4Q9UJW0 460 aa6.24□□□□□ -1.41
VMP1-212ENST00000591782 GDF2Q9UK05 429 aaPredicted RBP6.24□□□□□ -1.41
VMP1-212ENST00000591782 CELA2BP08218 269 aaPredicted RBP6.23□□□□□ -1.41
VMP1-212ENST00000591782 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
VMP1-212ENST00000591782 MAPK1P28482 360 aa6.23□□□□□ -1.41
VMP1-212ENST00000591782 TBC1D8BQ0IIM8 1120 aa6.23□□□□□ -1.41
VMP1-212ENST00000591782 ZNF385CQ66K41 422 aaPredicted RBP6.23□□□□□ -1.41
VMP1-212ENST00000591782 PDE12Q6L8Q7 609 aaKnown RBP6.23□□□□□ -1.41
VMP1-212ENST00000591782 SLCO4C1Q6ZQN7 724 aa6.23□□□□□ -1.41
VMP1-212ENST00000591782 TTC16Q8NEE8 873 aa6.23□□□□□ -1.41
VMP1-212ENST00000591782 TNFRSF25Q93038 417 aa6.23□□□□□ -1.41
VMP1-212ENST00000591782 UBE2OQ9C0C9 1292 aaKnown RBP6.23□□□□□ -1.41
VMP1-212ENST00000591782 IGFLR1Q9H665 355 aa6.23□□□□□ -1.41
VMP1-212ENST00000591782 TMEM63CQ9P1W3 806 aa6.23□□□□□ -1.41
VMP1-212ENST00000591782 MMP20O60882 483 aa6.22□□□□□ -1.41
VMP1-212ENST00000591782 BCRP11274 1271 aa6.22□□□□□ -1.41
VMP1-212ENST00000591782 DHX32Q7L7V1 743 aaKnown RBP6.22□□□□□ -1.41
VMP1-212ENST00000591782 SVOPQ8N4V2 548 aa6.22□□□□□ -1.41
VMP1-212ENST00000591782 RBCK1Q9BYM8 510 aa6.22□□□□□ -1.41
VMP1-212ENST00000591782 ELP3Q9H9T3 547 aa6.22□□□□□ -1.41
VMP1-212ENST00000591782 ABI2Q9NYB9 513 aaPredicted RBP6.22□□□□□ -1.41
VMP1-212ENST00000591782 OIP5O43482 229 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 MAP3K6O95382 1288 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 EPXP11678 715 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 EHHADHQ08426 723 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 XKR5Q6UX68 686 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 TMC7Q7Z402 723 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 ZSCAN1Q8NBB4 408 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 GALNT6Q8NCL4 622 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 TMC1Q8TDI8 760 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 EDARADDQ8WWZ3 215 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 CITED4Q96RK1 184 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 FAM129BQ96TA1 746 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 MDFIQ99750 246 aa6.21□□□□□ -1.42
VMP1-212ENST00000591782 DNAJB12Q9NXW2 375 aaKnown RBP6.21□□□□□ -1.42
VMP1-212ENST00000591782 ELOA3CA0A087WX78 387 aaPredicted RBP6.2□□□□□ -1.42
VMP1-212ENST00000591782 ELOA3DA6NLF2 546 aaPredicted RBP6.2□□□□□ -1.42
VMP1-212ENST00000591782 ADARB2-AS1A8MUL3 147 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 SHISA8B8ZZ34 492 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 GPR182O15218 404 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 TNFRSF21O75509 655 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 IGHA2P01877 340 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 PSAPP07602 524 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 ADH7P40394 386 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 MARSP56192 900 aaKnown RBP6.2□□□□□ -1.42
VMP1-212ENST00000591782 INSM1Q01101 510 aaPredicted RBP6.2□□□□□ -1.42
VMP1-212ENST00000591782 MAP3K10Q02779 954 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 MLLT1Q03111 559 aaPredicted RBP6.2□□□□□ -1.42
VMP1-212ENST00000591782 PDE3BQ13370 1112 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 ELOA3BQ3SY89 546 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 TTC39BQ5VTQ0 682 aaPredicted RBP6.2□□□□□ -1.42
VMP1-212ENST00000591782 ELOA3Q8NG57 546 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 OR13H1Q8NG92 308 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 TLR7Q9NYK1 1049 aaKnown RBP6.2□□□□□ -1.42
VMP1-212ENST00000591782 CNTN3Q9P232 1028 aa6.2□□□□□ -1.42
VMP1-212ENST00000591782 FOXD3Q9UJU5 478 aaPredicted RBP6.2□□□□□ -1.42
VMP1-212ENST00000591782 ZBTB42B2RXF5 422 aa6.19□□□□□ -1.42
VMP1-212ENST00000591782 CYP2E1P05181 493 aaPredicted RBP6.19□□□□□ -1.42
VMP1-212ENST00000591782 PLAURQ03405 335 aa6.19□□□□□ -1.42
VMP1-212ENST00000591782 C1orf127Q8N9H9 656 aa6.19□□□□□ -1.42
VMP1-212ENST00000591782 NSUN5Q96P11 429 aaKnown RBP6.19□□□□□ -1.42
VMP1-212ENST00000591782 LRRC4BQ9NT99 713 aa6.19□□□□□ -1.42
VMP1-212ENST00000591782 SLC6A14Q9UN76 642 aa6.19□□□□□ -1.42
VMP1-212ENST00000591782 ARHGEF15O94989 841 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 ALAS2P22557 587 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 SOX18P35713 384 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 NRLP54845 237 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 GPLD1P80108 840 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 COL13A1Q5TAT6 717 aaPredicted RBP6.18□□□□□ -1.42
VMP1-212ENST00000591782 HFE2Q6ZVN8 426 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 TRPM4Q8TD43 1214 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 SNX29Q8TEQ0 813 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 DMRTB1Q96MA1 342 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 NIF3L1Q9GZT8 377 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 CHRDQ9H2X0 955 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 KANSL3Q9P2N6 904 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 NAGPAQ9UK23 515 aa6.18□□□□□ -1.42
VMP1-212ENST00000591782 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.18□□□□□ -1.42
VMP1-212ENST00000591782 PHF20L1A8MW92 1017 aa6.17□□□□□ -1.42
VMP1-212ENST00000591782 PHACTR2O75167 634 aa6.17□□□□□ -1.42
VMP1-212ENST00000591782 HOXD8P13378 290 aaPredicted RBP6.17□□□□□ -1.42
VMP1-212ENST00000591782 AMPD1P23109 780 aa6.17□□□□□ -1.42
VMP1-212ENST00000591782 ORC1Q13415 861 aa6.17□□□□□ -1.42
VMP1-212ENST00000591782 PCSK7Q16549 785 aa6.17□□□□□ -1.42
VMP1-212ENST00000591782 CCDC27Q2M243 656 aa6.17□□□□□ -1.42
VMP1-212ENST00000591782 CHSY3Q70JA7 882 aa6.17□□□□□ -1.42
VMP1-212ENST00000591782 NEDD1Q8NHV4 660 aa6.17□□□□□ -1.42
VMP1-212ENST00000591782 BTBD6Q96KE9 485 aa6.17□□□□□ -1.42
VMP1-212ENST00000591782 ASB16Q96NS5 453 aa6.17□□□□□ -1.42
VMP1-212ENST00000591782 ENAMQ9NRM1 1142 aa6.17□□□□□ -1.42
VMP1-212ENST00000591782 J3QW42 95 aa6.16□□□□□ -1.42
VMP1-212ENST00000591782 EREGO14944 169 aa6.16□□□□□ -1.42
VMP1-212ENST00000591782 CPB1P15086 417 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms