RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 STAP2Q9UGK3 403 aa23.82■■□□□ 1.4
SPHK1-207ENST00000590959 SEC24BO95487 1268 aa23.81■■□□□ 1.4
SPHK1-207ENST00000590959 TBC1D9BQ66K14 1250 aa23.81■■□□□ 1.4
SPHK1-207ENST00000590959 CHMP3Q9Y3E7 222 aa23.81■■□□□ 1.4
SPHK1-207ENST00000590959 CDHR2Q9BYE9 1310 aa23.81■■□□□ 1.4
SPHK1-207ENST00000590959 SLC4A3P48751 1232 aa23.81■■□□□ 1.4
SPHK1-207ENST00000590959 PTPN12Q05209 780 aaKnown RBP23.81■■□□□ 1.4
SPHK1-207ENST00000590959 KLHDC4Q8TBB5 520 aa23.81■■□□□ 1.4
SPHK1-207ENST00000590959 PLA2G12BQ9BX93 195 aa23.81■■□□□ 1.4
SPHK1-207ENST00000590959 SIL1Q9H173 461 aa23.81■■□□□ 1.4
SPHK1-207ENST00000590959 UBN2Q6ZU65 1347 aa23.8■■□□□ 1.4
SPHK1-207ENST00000590959 CLEC4GQ6UXB4 293 aa23.8■■□□□ 1.4
SPHK1-207ENST00000590959 BICDL1Q6ZP65 573 aa23.8■■□□□ 1.4
SPHK1-207ENST00000590959 FLAD1Q8NFF5 587 aa23.8■■□□□ 1.4
SPHK1-207ENST00000590959 ZNF652Q9Y2D9 606 aa23.8■■□□□ 1.4
SPHK1-207ENST00000590959 AOX1Q06278 1338 aa23.8■■□□□ 1.4
SPHK1-207ENST00000590959 TRMT112Q9UI30 125 aaKnown RBP23.79■■□□□ 1.4
SPHK1-207ENST00000590959 QSER1Q2KHR3 1735 aa23.79■■□□□ 1.4
SPHK1-207ENST00000590959 SASH1O94885 1247 aa23.79■■□□□ 1.4
SPHK1-207ENST00000590959 R3HDM1Q15032 1099 aaKnown RBP23.79■■□□□ 1.4
SPHK1-207ENST00000590959 NUTM1Q86Y26 1132 aa23.79■■□□□ 1.4
SPHK1-207ENST00000590959 NIP7Q9Y221 180 aaKnown RBP eCLIP23.78■■□□□ 1.4
SPHK1-207ENST00000590959 CDC45O75419 566 aa23.77■■□□□ 1.4
SPHK1-207ENST00000590959 PARP10Q53GL7 1025 aa23.77■■□□□ 1.4
SPHK1-207ENST00000590959 SDSP20132 328 aa23.77■■□□□ 1.4
SPHK1-207ENST00000590959 MSL1Q68DK7 614 aa23.77■■□□□ 1.4
SPHK1-207ENST00000590959 PSDA5PKW4 1024 aaPredicted RBP23.76■■□□□ 1.39
SPHK1-207ENST00000590959 FAM177BA6PVY3 158 aa23.76■■□□□ 1.39
SPHK1-207ENST00000590959 RGL2O15211 777 aa23.76■■□□□ 1.39
SPHK1-207ENST00000590959 TSHZ3Q63HK5 1081 aa23.76■■□□□ 1.39
SPHK1-207ENST00000590959 IFIT2P09913 472 aaKnown RBP23.75■■□□□ 1.39
SPHK1-207ENST00000590959 NFIXQ14938 502 aa23.75■■□□□ 1.39
SPHK1-207ENST00000590959 SUSD4Q5VX71 490 aa23.75■■□□□ 1.39
SPHK1-207ENST00000590959 IRS4O14654 1257 aaPredicted RBP23.75■■□□□ 1.39
SPHK1-207ENST00000590959 TBC1D9Q6ZT07 1266 aa23.75■■□□□ 1.39
SPHK1-207ENST00000590959 SYNE4Q8N205 404 aa23.75■■□□□ 1.39
SPHK1-207ENST00000590959 TBC1D32Q96NH3 1257 aa23.75■■□□□ 1.39
SPHK1-207ENST00000590959 CSF1RP07333 972 aa23.74■■□□□ 1.39
SPHK1-207ENST00000590959 CCDC57Q2TAC2 916 aa23.74■■□□□ 1.39
SPHK1-207ENST00000590959 AACSQ86V21 672 aa23.74■■□□□ 1.39
SPHK1-207ENST00000590959 SRCAPQ6ZRS2 3230 aa23.74■■□□□ 1.39
SPHK1-207ENST00000590959 TTC41PQ6P2S7 1318 aa23.73■■□□□ 1.39
SPHK1-207ENST00000590959 UTP14AQ9BVJ6 771 aaKnown RBP23.73■■□□□ 1.39
SPHK1-207ENST00000590959 SH3TC1Q8TE82 1336 aa23.73■■□□□ 1.39
SPHK1-207ENST00000590959 TM4SF1P30408 202 aa23.73■■□□□ 1.39
SPHK1-207ENST00000590959 MFAP1P55081 439 aaKnown RBP23.73■■□□□ 1.39
SPHK1-207ENST00000590959 GPATCH3Q96I76 525 aa23.73■■□□□ 1.39
SPHK1-207ENST00000590959 PDE8AO60658 829 aa23.72■■□□□ 1.39
SPHK1-207ENST00000590959 EIF5BO60841 1220 aaKnown RBP23.72■■□□□ 1.39
SPHK1-207ENST00000590959 SETDB2Q96T68 719 aa23.72■■□□□ 1.39
SPHK1-207ENST00000590959 FRAT2O75474 233 aaPredicted RBP23.71■■□□□ 1.39
SPHK1-207ENST00000590959 CTSWP56202 376 aa23.71■■□□□ 1.39
SPHK1-207ENST00000590959 CASC1Q6TDU7 716 aa23.71■■□□□ 1.39
SPHK1-207ENST00000590959 PI4K2BQ8TCG2 481 aa23.71■■□□□ 1.39
SPHK1-207ENST00000590959 EAF2Q96CJ1 260 aaPredicted RBP23.71■■□□□ 1.39
SPHK1-207ENST00000590959 DDR1Q08345 913 aa23.7■■□□□ 1.39
SPHK1-207ENST00000590959 TTLL11Q8NHH1 800 aa23.7■■□□□ 1.39
SPHK1-207ENST00000590959 ECHDC1Q9NTX5 307 aa23.7■■□□□ 1.39
SPHK1-207ENST00000590959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.7■■□□□ 1.39
SPHK1-207ENST00000590959 ERC2O15083 957 aa23.7■■□□□ 1.38
SPHK1-207ENST00000590959 CIAO1O76071 339 aa23.7■■□□□ 1.38
SPHK1-207ENST00000590959 HSP90B1P14625 803 aaKnown RBP23.7■■□□□ 1.38
SPHK1-207ENST00000590959 IL15P40933 162 aaPredicted RBP23.7■■□□□ 1.38
SPHK1-207ENST00000590959 IFIT5Q13325 482 aaKnown RBP23.7■■□□□ 1.38
SPHK1-207ENST00000590959 NLGN1Q8N2Q7 840 aa23.7■■□□□ 1.38
SPHK1-207ENST00000590959 FBXO3Q9UK99 471 aa23.7■■□□□ 1.38
SPHK1-207ENST00000590959 EYA2O00167 538 aa23.69■■□□□ 1.38
SPHK1-207ENST00000590959 SOCS7O14512 581 aa23.69■■□□□ 1.38
SPHK1-207ENST00000590959 GLRX3O76003 335 aaKnown RBP23.69■■□□□ 1.38
SPHK1-207ENST00000590959 TFCP2Q12800 502 aa23.69■■□□□ 1.38
SPHK1-207ENST00000590959 IL27Q8NEV9 243 aa23.69■■□□□ 1.38
SPHK1-207ENST00000590959 TRIM6-TRIM34B2RNG4 842 aa23.68■■□□□ 1.38
SPHK1-207ENST00000590959 NTSR2O95665 410 aa23.68■■□□□ 1.38
SPHK1-207ENST00000590959 CCDC24Q8N4L8 307 aa23.68■■□□□ 1.38
SPHK1-207ENST00000590959 CASZ1Q86V15 1759 aa23.68■■□□□ 1.38
SPHK1-207ENST00000590959 ZBTB7AO95365 584 aa23.68■■□□□ 1.38
SPHK1-207ENST00000590959 TAF7LQ5H9L4 462 aa23.68■■□□□ 1.38
SPHK1-207ENST00000590959 ATG9AQ7Z3C6 839 aa23.68■■□□□ 1.38
SPHK1-207ENST00000590959 ZNF594Q96JF6 807 aaPredicted RBP23.68■■□□□ 1.38
SPHK1-207ENST00000590959 CCDC85AQ96PX6 553 aaPredicted RBP23.68■■□□□ 1.38
SPHK1-207ENST00000590959 POLRMTO00411 1230 aaKnown RBP23.67■■□□□ 1.38
SPHK1-207ENST00000590959 MMP10P09238 476 aa23.67■■□□□ 1.38
SPHK1-207ENST00000590959 TNNI3KQ59H18 835 aa23.67■■□□□ 1.38
SPHK1-207ENST00000590959 RILPL2Q969X0 211 aa23.67■■□□□ 1.38
SPHK1-207ENST00000590959 CCDC8Q9H0W5 538 aaPredicted RBP23.67■■□□□ 1.38
SPHK1-207ENST00000590959 FPGT-TNNI3KV9GXZ4 949 aa23.67■■□□□ 1.38
SPHK1-207ENST00000590959 COL24A1Q17RW2 1714 aa23.67■■□□□ 1.38
SPHK1-207ENST00000590959 GREM2Q9H772 168 aa23.66■■□□□ 1.38
SPHK1-207ENST00000590959 ITGA6P23229 1130 aa23.66■■□□□ 1.38
SPHK1-207ENST00000590959 CARMIL3Q8ND23 1372 aa23.65■■□□□ 1.38
SPHK1-207ENST00000590959 ANKRD18BA2A2Z9 1011 aa23.65■■□□□ 1.38
SPHK1-207ENST00000590959 LRRC24Q50LG9 513 aa23.65■■□□□ 1.38
SPHK1-207ENST00000590959 NBPF5PQ86XG9 351 aaPredicted RBP23.65■■□□□ 1.38
SPHK1-207ENST00000590959 C22orf23Q9BZE7 217 aa23.65■■□□□ 1.38
SPHK1-207ENST00000590959 SERPINB2P05120 415 aa23.64■■□□□ 1.38
SPHK1-207ENST00000590959 ERFEQ4G0M1 354 aa23.64■■□□□ 1.38
SPHK1-207ENST00000590959 SLC16A10Q8TF71 515 aa23.64■■□□□ 1.38
SPHK1-207ENST00000590959 GPR108Q9NPR9 543 aa23.64■■□□□ 1.38
SPHK1-207ENST00000590959 HCLS1P14317 486 aaPredicted RBP23.64■■□□□ 1.37
SPHK1-207ENST00000590959 CNTROBQ8N137 903 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms