RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 NIM1KQ8IY84 436 aa9.81□□□□□ -0.84
NPC1-208ENST00000590301 GRAPLQ8TC17 118 aaPredicted RBP9.81□□□□□ -0.84
NPC1-208ENST00000590301 SLX4Q8IY92 1834 aa9.81□□□□□ -0.84
NPC1-208ENST00000590301 TIAM2Q8IVF5 1701 aa9.81□□□□□ -0.84
NPC1-208ENST00000590301 FER1L6Q2WGJ9 1857 aa9.81□□□□□ -0.84
NPC1-208ENST00000590301 PPIP5K2O43314 1243 aa9.8□□□□□ -0.84
NPC1-208ENST00000590301 LMOD1P29536 600 aaPredicted RBP9.8□□□□□ -0.84
NPC1-208ENST00000590301 EPHX2P34913 555 aa9.8□□□□□ -0.84
NPC1-208ENST00000590301 SF3B3Q15393 1217 aaKnown RBP9.8□□□□□ -0.84
NPC1-208ENST00000590301 RIC3Q7Z5B4 369 aa9.8□□□□□ -0.84
NPC1-208ENST00000590301 MPNDQ8N594 471 aa9.8□□□□□ -0.84
NPC1-208ENST00000590301 CREBZFQ9NS37 354 aa9.8□□□□□ -0.84
NPC1-208ENST00000590301 SBF1O95248 1867 aa9.79□□□□□ -0.84
NPC1-208ENST00000590301 HTRA3P83110 453 aa9.79□□□□□ -0.84
NPC1-208ENST00000590301 WWC1Q8IX03 1113 aa9.79□□□□□ -0.84
NPC1-208ENST00000590301 ZBTB38Q8NAP3 1195 aaPredicted RBP9.79□□□□□ -0.84
NPC1-208ENST00000590301 C8orf58Q8NAV2 365 aa9.79□□□□□ -0.84
NPC1-208ENST00000590301 CCDC191Q8NCU4 936 aa9.79□□□□□ -0.84
NPC1-208ENST00000590301 FAM89AQ96GI7 184 aa9.79□□□□□ -0.84
NPC1-208ENST00000590301 MRS2Q9HD23 443 aa9.79□□□□□ -0.84
NPC1-208ENST00000590301 ZNRF3Q9ULT6 936 aa9.79□□□□□ -0.84
NPC1-208ENST00000590301 CDHR2Q9BYE9 1310 aa9.79□□□□□ -0.84
NPC1-208ENST00000590301 ATP5J2-PTCD1G3V325 749 aa9.78□□□□□ -0.84
NPC1-208ENST00000590301 ELL2O00472 640 aaPredicted RBP9.78□□□□□ -0.84
NPC1-208ENST00000590301 IRS4O14654 1257 aaPredicted RBP9.78□□□□□ -0.84
NPC1-208ENST00000590301 TCERG1O14776 1098 aaKnown RBP9.78□□□□□ -0.84
NPC1-208ENST00000590301 KIAA2012Q0VF49 1180 aa9.78□□□□□ -0.84
NPC1-208ENST00000590301 EAPPQ56P03 285 aaPredicted RBP9.78□□□□□ -0.84
NPC1-208ENST00000590301 STK31Q9BXU1 1019 aa9.78□□□□□ -0.84
NPC1-208ENST00000590301 GJA3Q9Y6H8 435 aa9.78□□□□□ -0.84
NPC1-208ENST00000590301 PASKQ96RG2 1323 aa9.78□□□□□ -0.84
NPC1-208ENST00000590301 PCCAP05165 728 aaPredicted RBP9.77□□□□□ -0.85
NPC1-208ENST00000590301 POTEIP0CG38 1075 aa9.77□□□□□ -0.85
NPC1-208ENST00000590301 POTEJP0CG39 1038 aa9.77□□□□□ -0.85
NPC1-208ENST00000590301 TNIP1Q15025 636 aa9.77□□□□□ -0.85
NPC1-208ENST00000590301 AOC3Q16853 763 aa9.77□□□□□ -0.85
NPC1-208ENST00000590301 IFFO2Q5TF58 517 aa9.77□□□□□ -0.85
NPC1-208ENST00000590301 USP50Q70EL3 339 aaPredicted RBP9.77□□□□□ -0.85
NPC1-208ENST00000590301 METTL22Q9BUU2 404 aaPredicted RBP9.77□□□□□ -0.85
NPC1-208ENST00000590301 PHAXQ9H814 394 aaKnown RBP9.77□□□□□ -0.85
NPC1-208ENST00000590301 CWC25Q9NXE8 425 aaPredicted RBP9.77□□□□□ -0.85
NPC1-208ENST00000590301 CLEC11AQ9Y240 323 aa9.77□□□□□ -0.85
NPC1-208ENST00000590301 TMEM88BA6NKF7 163 aa9.76□□□□□ -0.85
NPC1-208ENST00000590301 ITGBL1O95965 494 aaPredicted RBP9.76□□□□□ -0.85
NPC1-208ENST00000590301 SCNN1DP51172 638 aa9.76□□□□□ -0.85
NPC1-208ENST00000590301 RPS8P62241 208 aaKnown RBP9.76□□□□□ -0.85
NPC1-208ENST00000590301 NEXNQ0ZGT2 675 aa9.76□□□□□ -0.85
NPC1-208ENST00000590301 TWISTNBQ3B726 338 aaPredicted RBP9.76□□□□□ -0.85
NPC1-208ENST00000590301 CCDC152Q4G0S7 254 aa9.76□□□□□ -0.85
NPC1-208ENST00000590301 CCDC184Q52MB2 194 aa9.76□□□□□ -0.85
NPC1-208ENST00000590301 KSR2Q6VAB6 950 aa9.76□□□□□ -0.85
NPC1-208ENST00000590301 WDR63Q8IWG1 891 aa9.76□□□□□ -0.85
NPC1-208ENST00000590301 EYA3Q99504 573 aa9.76□□□□□ -0.85
NPC1-208ENST00000590301 MYD88Q99836 296 aa9.76□□□□□ -0.85
NPC1-208ENST00000590301 ADARB2Q9NS39 739 aaKnown RBP9.76□□□□□ -0.85
NPC1-208ENST00000590301 PDE8AO60658 829 aa9.75□□□□□ -0.85
NPC1-208ENST00000590301 CXCL9Q07325 125 aa9.75□□□□□ -0.85
NPC1-208ENST00000590301 CIAPIN1Q6FI81 312 aa9.75□□□□□ -0.85
NPC1-208ENST00000590301 CNTROBQ8N137 903 aa9.75□□□□□ -0.85
NPC1-208ENST00000590301 TSPYL6Q8N831 410 aa9.75□□□□□ -0.85
NPC1-208ENST00000590301 TSR2Q969E8 191 aaKnown RBP9.75□□□□□ -0.85
NPC1-208ENST00000590301 GPRC5DQ9NZD1 345 aa9.75□□□□□ -0.85
NPC1-208ENST00000590301 NUP98P52948 1817 aa9.75□□□□□ -0.85
NPC1-208ENST00000590301 COL4A5P29400 1685 aa9.74□□□□□ -0.85
NPC1-208ENST00000590301 PI4KAP2A4QPH2 592 aa9.74□□□□□ -0.85
NPC1-208ENST00000590301 EPS15P42566 896 aa9.74□□□□□ -0.85
NPC1-208ENST00000590301 WASHC4Q2M389 1173 aa9.74□□□□□ -0.85
NPC1-208ENST00000590301 TPRNQ4KMQ1 711 aa9.74□□□□□ -0.85
NPC1-208ENST00000590301 RTL5Q5HYW3 569 aaPredicted RBP9.74□□□□□ -0.85
NPC1-208ENST00000590301 SLC51AQ86UW1 340 aa9.74□□□□□ -0.85
NPC1-208ENST00000590301 PI4KAP1Q8N8J0 262 aa9.74□□□□□ -0.85
NPC1-208ENST00000590301 ZC3H15Q8WU90 426 aaKnown RBP9.74□□□□□ -0.85
NPC1-208ENST00000590301 CELF1Q92879 486 aaKnown RBP9.74□□□□□ -0.85
NPC1-208ENST00000590301 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
NPC1-208ENST00000590301 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.74□□□□□ -0.85
NPC1-208ENST00000590301 NSFL1CQ9UNZ2 370 aaKnown RBP9.74□□□□□ -0.85
NPC1-208ENST00000590301 MAP3K2Q9Y2U5 619 aa9.74□□□□□ -0.85
NPC1-208ENST00000590301 CNTNAP1P78357 1384 aa9.74□□□□□ -0.85
NPC1-208ENST00000590301 C6orf229H3BNL8 230 aa9.73□□□□□ -0.85
NPC1-208ENST00000590301 RPS12P25398 132 aaKnown RBP9.73□□□□□ -0.85
NPC1-208ENST00000590301 GMPSP49915 693 aaPredicted RBP9.73□□□□□ -0.85
NPC1-208ENST00000590301 MAP1SQ66K74 1059 aaPredicted RBP9.73□□□□□ -0.85
NPC1-208ENST00000590301 DPF2Q92785 391 aa9.73□□□□□ -0.85
NPC1-208ENST00000590301 CDC5LQ99459 802 aaKnown RBP9.73□□□□□ -0.85
NPC1-208ENST00000590301 BCL2L13Q9BXK5 485 aa9.73□□□□□ -0.85
NPC1-208ENST00000590301 MYH16Q9H6N6 1097 aa9.73□□□□□ -0.85
NPC1-208ENST00000590301 FANCIQ9NVI1 1328 aa9.73□□□□□ -0.85
NPC1-208ENST00000590301 RTL9Q8NET4 1388 aa9.73□□□□□ -0.85
NPC1-208ENST00000590301 DICER1Q9UPY3 1922 aaKnown RBP9.72□□□□□ -0.85
NPC1-208ENST00000590301 RASSF10A6NK89 507 aa9.72□□□□□ -0.85
NPC1-208ENST00000590301 RAD17O75943 681 aa9.72□□□□□ -0.85
NPC1-208ENST00000590301 IGKV5-2P06315 115 aa9.72□□□□□ -0.85
NPC1-208ENST00000590301 CTSWP56202 376 aa9.72□□□□□ -0.85
NPC1-208ENST00000590301 GPSM2P81274 684 aa9.72□□□□□ -0.85
NPC1-208ENST00000590301 TBC1D16Q8TBP0 767 aa9.72□□□□□ -0.85
NPC1-208ENST00000590301 ZC3H12CQ9C0D7 883 aaKnown RBP9.72□□□□□ -0.85
NPC1-208ENST00000590301 MKRN1Q9UHC7 482 aaKnown RBP9.72□□□□□ -0.85
NPC1-208ENST00000590301 PGAP2Q9UHJ9 254 aa9.72□□□□□ -0.85
NPC1-208ENST00000590301 SCN4AP35499 1836 aa9.72□□□□□ -0.85
NPC1-208ENST00000590301 SPDYE4A6NLX3 237 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms