RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 EPS15P42566 896 aa13.6□□□□□ -0.23
RETREG3-209ENST00000590035 VEGFBP49765 207 aa13.6□□□□□ -0.23
RETREG3-209ENST00000590035 AIMP1Q12904 312 aaKnown RBP13.6□□□□□ -0.23
RETREG3-209ENST00000590035 NEUROD2Q15784 382 aa13.6□□□□□ -0.23
RETREG3-209ENST00000590035 AOC3Q16853 763 aa13.6□□□□□ -0.23
RETREG3-209ENST00000590035 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
RETREG3-209ENST00000590035 MAP1SQ66K74 1059 aaPredicted RBP13.6□□□□□ -0.23
RETREG3-209ENST00000590035 NECTIN2Q92692 538 aa13.6□□□□□ -0.23
RETREG3-209ENST00000590035 PPIP5K2O43314 1243 aa13.59□□□□□ -0.23
RETREG3-209ENST00000590035 CXCL9Q07325 125 aa13.59□□□□□ -0.23
RETREG3-209ENST00000590035 KIAA2012Q0VF49 1180 aa13.59□□□□□ -0.23
RETREG3-209ENST00000590035 GRAPQ13588 217 aa13.59□□□□□ -0.23
RETREG3-209ENST00000590035 SF3B3Q15393 1217 aaKnown RBP13.59□□□□□ -0.23
RETREG3-209ENST00000590035 HDGFL1Q5TGJ6 251 aa13.59□□□□□ -0.23
RETREG3-209ENST00000590035 GRAPLQ8TC17 118 aaPredicted RBP13.59□□□□□ -0.23
RETREG3-209ENST00000590035 MBIPQ9NS73 344 aa13.59□□□□□ -0.23
RETREG3-209ENST00000590035 DBF4Q9UBU7 674 aaPredicted RBP13.59□□□□□ -0.23
RETREG3-209ENST00000590035 TRMT112Q9UI30 125 aaKnown RBP13.59□□□□□ -0.23
RETREG3-209ENST00000590035 TRPM7Q96QT4 1865 aa13.59□□□□□ -0.23
RETREG3-209ENST00000590035 WDR43Q15061 677 aaKnown RBP eCLIP13.58□□□□□ -0.24
RETREG3-209ENST00000590035 DUSP27Q5VZP5 1158 aa13.58□□□□□ -0.24
RETREG3-209ENST00000590035 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
RETREG3-209ENST00000590035 USP50Q70EL3 339 aaPredicted RBP13.58□□□□□ -0.24
RETREG3-209ENST00000590035 NIM1KQ8IY84 436 aa13.58□□□□□ -0.24
RETREG3-209ENST00000590035 SUPT20HQ8NEM7 779 aa13.58□□□□□ -0.24
RETREG3-209ENST00000590035 GPRC5DQ9NZD1 345 aa13.58□□□□□ -0.24
RETREG3-209ENST00000590035 PGAP2Q9UHJ9 254 aa13.58□□□□□ -0.24
RETREG3-209ENST00000590035 ZNRF3Q9ULT6 936 aa13.58□□□□□ -0.24
RETREG3-209ENST00000590035 GJA3Q9Y6H8 435 aa13.58□□□□□ -0.24
RETREG3-209ENST00000590035 CDHR2Q9BYE9 1310 aa13.58□□□□□ -0.24
RETREG3-209ENST00000590035 TCERG1O14776 1098 aaKnown RBP13.57□□□□□ -0.24
RETREG3-209ENST00000590035 FOXN1O15353 648 aa13.57□□□□□ -0.24
RETREG3-209ENST00000590035 TMC4Q7Z404 712 aa13.57□□□□□ -0.24
RETREG3-209ENST00000590035 TNS4Q8IZW8 715 aa13.57□□□□□ -0.24
RETREG3-209ENST00000590035 MPNDQ8N594 471 aa13.57□□□□□ -0.24
RETREG3-209ENST00000590035 WBP1LQ9NX94 342 aa13.57□□□□□ -0.24
RETREG3-209ENST00000590035 YDJCA8MPS7 323 aa13.56□□□□□ -0.24
RETREG3-209ENST00000590035 LMOD1P29536 600 aaPredicted RBP13.56□□□□□ -0.24
RETREG3-209ENST00000590035 FMR1Q06787 632 aaKnown RBP eCLIP13.56□□□□□ -0.24
RETREG3-209ENST00000590035 DPP8Q6V1X1 898 aaPredicted RBP13.56□□□□□ -0.24
RETREG3-209ENST00000590035 DDX46Q7L014 1031 aaKnown RBP13.56□□□□□ -0.24
RETREG3-209ENST00000590035 IFT57Q9NWB7 429 aa13.56□□□□□ -0.24
RETREG3-209ENST00000590035 HYPKQ9NX55 129 aa13.56□□□□□ -0.24
RETREG3-209ENST00000590035 CLEC11AQ9Y240 323 aa13.56□□□□□ -0.24
RETREG3-209ENST00000590035 CST9Q5W186 159 aa13.55□□□□□ -0.24
RETREG3-209ENST00000590035 CELF1Q92879 486 aaKnown RBP13.55□□□□□ -0.24
RETREG3-209ENST00000590035 FAM89AQ96GI7 184 aa13.55□□□□□ -0.24
RETREG3-209ENST00000590035 PRDM10Q9NQV6 1147 aa13.55□□□□□ -0.24
RETREG3-209ENST00000590035 ADARB2Q9NS39 739 aaKnown RBP13.55□□□□□ -0.24
RETREG3-209ENST00000590035 LAS1LQ9Y4W2 734 aaKnown RBP13.55□□□□□ -0.24
RETREG3-209ENST00000590035 ATP5J2-PTCD1G3V325 749 aa13.54□□□□□ -0.24
RETREG3-209ENST00000590035 APAF1O14727 1248 aa13.54□□□□□ -0.24
RETREG3-209ENST00000590035 GMPSP49915 693 aaPredicted RBP13.54□□□□□ -0.24
RETREG3-209ENST00000590035 DEFB115Q30KQ5 88 aa13.54□□□□□ -0.24
RETREG3-209ENST00000590035 HIRAP54198 1017 aaPredicted RBP13.53□□□□□ -0.24
RETREG3-209ENST00000590035 CIAPIN1Q6FI81 312 aa13.53□□□□□ -0.24
RETREG3-209ENST00000590035 PHAXQ9H814 394 aaKnown RBP13.53□□□□□ -0.24
RETREG3-209ENST00000590035 SCN9AQ15858 1988 aa13.52□□□□□ -0.24
RETREG3-209ENST00000590035 TRAF5O00463 557 aa13.52□□□□□ -0.25
RETREG3-209ENST00000590035 GNAI1P63096 354 aa13.52□□□□□ -0.25
RETREG3-209ENST00000590035 ZBTB38Q8NAP3 1195 aaPredicted RBP13.52□□□□□ -0.25
RETREG3-209ENST00000590035 C8orf58Q8NAV2 365 aa13.52□□□□□ -0.25
RETREG3-209ENST00000590035 ZC3H15Q8WU90 426 aaKnown RBP13.52□□□□□ -0.25
RETREG3-209ENST00000590035 TMX4Q9H1E5 349 aaPredicted RBP13.52□□□□□ -0.25
RETREG3-209ENST00000590035 POLLQ9UGP5 575 aa13.52□□□□□ -0.25
RETREG3-209ENST00000590035 TLL2Q9Y6L7 1015 aa13.52□□□□□ -0.25
RETREG3-209ENST00000590035 WDR33Q9C0J8 1336 aaKnown RBP13.52□□□□□ -0.25
RETREG3-209ENST00000590035 ZNF609O15014 1411 aa13.52□□□□□ -0.25
RETREG3-209ENST00000590035 RTL9Q8NET4 1388 aa13.51□□□□□ -0.25
RETREG3-209ENST00000590035 IRS4O14654 1257 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-209ENST00000590035 RAD17O75943 681 aa13.51□□□□□ -0.25
RETREG3-209ENST00000590035 CTCFP49711 727 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-209ENST00000590035 TNIP1Q15025 636 aa13.51□□□□□ -0.25
RETREG3-209ENST00000590035 TRPM4Q8TD43 1214 aa13.51□□□□□ -0.25
RETREG3-209ENST00000590035 DPF2Q92785 391 aa13.51□□□□□ -0.25
RETREG3-209ENST00000590035 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
RETREG3-209ENST00000590035 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
RETREG3-209ENST00000590035 SHTN1A0MZ66 631 aa13.5□□□□□ -0.25
RETREG3-209ENST00000590035 PCCAP05165 728 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-209ENST00000590035 HSPA8P11142 646 aaKnown RBP13.5□□□□□ -0.25
RETREG3-209ENST00000590035 DSG3P32926 999 aa13.5□□□□□ -0.25
RETREG3-209ENST00000590035 GPSM2P81274 684 aa13.5□□□□□ -0.25
RETREG3-209ENST00000590035 HHIPL1Q96JK4 782 aa13.5□□□□□ -0.25
RETREG3-209ENST00000590035 PSME4Q14997 1843 aa13.5□□□□□ -0.25
RETREG3-209ENST00000590035 RPS8P62241 208 aaKnown RBP13.49□□□□□ -0.25
RETREG3-209ENST00000590035 CALD1Q05682 793 aaKnown RBP13.49□□□□□ -0.25
RETREG3-209ENST00000590035 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
RETREG3-209ENST00000590035 CCDC184Q52MB2 194 aa13.49□□□□□ -0.25
RETREG3-209ENST00000590035 SAPCD2Q86UD0 394 aa13.49□□□□□ -0.25
RETREG3-209ENST00000590035 TSPYL6Q8N831 410 aa13.49□□□□□ -0.25
RETREG3-209ENST00000590035 CCDC191Q8NCU4 936 aa13.49□□□□□ -0.25
RETREG3-209ENST00000590035 TBC1D16Q8TBP0 767 aa13.49□□□□□ -0.25
RETREG3-209ENST00000590035 CAPNS2Q96L46 248 aa13.49□□□□□ -0.25
RETREG3-209ENST00000590035 GLIS2Q9BZE0 524 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-209ENST00000590035 ZNF646O15015 1829 aaPredicted RBP13.48□□□□□ -0.25
RETREG3-209ENST00000590035 PSMD14O00487 310 aa13.48□□□□□ -0.25
RETREG3-209ENST00000590035 MAP2K1Q02750 393 aaPredicted RBP13.48□□□□□ -0.25
RETREG3-209ENST00000590035 GOLGA2Q08379 1002 aa13.48□□□□□ -0.25
RETREG3-209ENST00000590035 WASHC4Q2M389 1173 aa13.48□□□□□ -0.25
RETREG3-209ENST00000590035 METTL22Q9BUU2 404 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms