RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 TAF5LO75529 589 aa17.15■□□□□ 0.34
RETREG3-208ENST00000589797 HOXB7P09629 217 aa17.15■□□□□ 0.34
RETREG3-208ENST00000589797 BRPF1P55201 1214 aaPredicted RBP17.15■□□□□ 0.34
RETREG3-208ENST00000589797 FAM182BQ5T319 152 aa17.15■□□□□ 0.34
RETREG3-208ENST00000589797 MIGA1Q8NAN2 632 aa17.15■□□□□ 0.34
RETREG3-208ENST00000589797 ZNF830Q96NB3 372 aaPredicted RBP17.15■□□□□ 0.34
RETREG3-208ENST00000589797 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
RETREG3-208ENST00000589797 MAP3K12Q12852 859 aa17.14■□□□□ 0.33
RETREG3-208ENST00000589797 TEX13AQ9BXU3 409 aaPredicted RBP17.14■□□□□ 0.33
RETREG3-208ENST00000589797 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
RETREG3-208ENST00000589797 BIN1O00499 593 aa17.14■□□□□ 0.33
RETREG3-208ENST00000589797 SMC2O95347 1197 aa17.14■□□□□ 0.33
RETREG3-208ENST00000589797 ANAPC15P60006 121 aa17.14■□□□□ 0.33
RETREG3-208ENST00000589797 C8orf76Q96K31 380 aa17.14■□□□□ 0.33
RETREG3-208ENST00000589797 ZNF396Q96N95 335 aaPredicted RBP17.14■□□□□ 0.33
RETREG3-208ENST00000589797 PPP1R1BQ9UD71 204 aaPredicted RBP17.14■□□□□ 0.33
RETREG3-208ENST00000589797 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.33
RETREG3-208ENST00000589797 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.33
RETREG3-208ENST00000589797 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
RETREG3-208ENST00000589797 IFIT3O14879 490 aaKnown RBP17.14■□□□□ 0.33
RETREG3-208ENST00000589797 CPS1P31327 1500 aa17.14■□□□□ 0.33
RETREG3-208ENST00000589797 LRRC24Q50LG9 513 aa17.13■□□□□ 0.33
RETREG3-208ENST00000589797 BABAM1Q9NWV8 329 aa17.13■□□□□ 0.33
RETREG3-208ENST00000589797 CDK12Q9NYV4 1490 aaPredicted RBP17.13■□□□□ 0.33
RETREG3-208ENST00000589797 NCOA5Q9HCD5 579 aaKnown RBP17.13■□□□□ 0.33
RETREG3-208ENST00000589797 WWC3Q9ULE0 1092 aa17.13■□□□□ 0.33
RETREG3-208ENST00000589797 A0A0D9SFI3 127 aa17.13■□□□□ 0.33
RETREG3-208ENST00000589797 HSP90AA2PQ14568 343 aaPredicted RBP17.13■□□□□ 0.33
RETREG3-208ENST00000589797 KLF18A0A0U1RQI7 1052 aa17.12■□□□□ 0.33
RETREG3-208ENST00000589797 CYP27B1O15528 508 aa17.12■□□□□ 0.33
RETREG3-208ENST00000589797 TRIM22Q8IYM9 498 aa17.12■□□□□ 0.33
RETREG3-208ENST00000589797 ORC3Q9UBD5 711 aaPredicted RBP17.12■□□□□ 0.33
RETREG3-208ENST00000589797 CFAP45Q9UL16 551 aa17.12■□□□□ 0.33
RETREG3-208ENST00000589797 LMTK2Q8IWU2 1503 aa17.12■□□□□ 0.33
RETREG3-208ENST00000589797 SLC5A1P13866 664 aa17.12■□□□□ 0.33
RETREG3-208ENST00000589797 PDILTQ8N807 584 aa17.12■□□□□ 0.33
RETREG3-208ENST00000589797 PUS3Q9BZE2 481 aaKnown RBP17.12■□□□□ 0.33
RETREG3-208ENST00000589797 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
RETREG3-208ENST00000589797 MAP3K11Q16584 847 aa17.12■□□□□ 0.33
RETREG3-208ENST00000589797 SLFNL1Q499Z3 407 aa17.12■□□□□ 0.33
RETREG3-208ENST00000589797 CCDC39Q9UFE4 941 aa17.12■□□□□ 0.33
RETREG3-208ENST00000589797 EYA2O00167 538 aa17.11■□□□□ 0.33
RETREG3-208ENST00000589797 CAVIN4Q5BKX8 364 aa17.11■□□□□ 0.33
RETREG3-208ENST00000589797 HOMER1Q86YM7 354 aa17.11■□□□□ 0.33
RETREG3-208ENST00000589797 ZNF652Q9Y2D9 606 aa17.11■□□□□ 0.33
RETREG3-208ENST00000589797 ITGA6P23229 1130 aa17.11■□□□□ 0.33
RETREG3-208ENST00000589797 ADCK5Q3MIX3 580 aa17.11■□□□□ 0.33
RETREG3-208ENST00000589797 CPSF1Q10570 1443 aaKnown RBP17.11■□□□□ 0.33
RETREG3-208ENST00000589797 ADGRB1O14514 1584 aa17.1■□□□□ 0.33
RETREG3-208ENST00000589797 CAMSAP1Q5T5Y3 1602 aa17.1■□□□□ 0.33
RETREG3-208ENST00000589797 NPHP4O75161 1426 aaPredicted RBP17.1■□□□□ 0.33
RETREG3-208ENST00000589797 IBTKQ9P2D0 1353 aaPredicted RBP17.1■□□□□ 0.33
RETREG3-208ENST00000589797 FAM98CQ17RN3 349 aaKnown RBP17.1■□□□□ 0.33
RETREG3-208ENST00000589797 OTUD7BQ6GQQ9 843 aa17.1■□□□□ 0.33
RETREG3-208ENST00000589797 SLC27A2O14975 620 aa17.1■□□□□ 0.33
RETREG3-208ENST00000589797 GADD45BO75293 160 aaPredicted RBP17.1■□□□□ 0.33
RETREG3-208ENST00000589797 EPHA10Q5JZY3 1008 aa17.1■□□□□ 0.33
RETREG3-208ENST00000589797 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
RETREG3-208ENST00000589797 ZKSCAN3Q9BRR0 538 aa17.1■□□□□ 0.33
RETREG3-208ENST00000589797 TRIM34Q9BYJ4 488 aa17.09■□□□□ 0.33
RETREG3-208ENST00000589797 CCDC183Q5T5S1 534 aa17.09■□□□□ 0.33
RETREG3-208ENST00000589797 SCAND2PQ9GZW5 306 aaPredicted RBP17.09■□□□□ 0.33
RETREG3-208ENST00000589797 F13A1P00488 732 aa17.08■□□□□ 0.33
RETREG3-208ENST00000589797 IKQ13123 557 aaPredicted RBP17.08■□□□□ 0.33
RETREG3-208ENST00000589797 TMEM67Q5HYA8 995 aa17.08■□□□□ 0.33
RETREG3-208ENST00000589797 NBPF5PQ86XG9 351 aaPredicted RBP17.08■□□□□ 0.33
RETREG3-208ENST00000589797 PIK3C2BO00750 1634 aa17.08■□□□□ 0.33
RETREG3-208ENST00000589797 TTLL5Q6EMB2 1281 aa17.08■□□□□ 0.32
RETREG3-208ENST00000589797 XAGE2Q96GT9 111 aa17.08■□□□□ 0.32
RETREG3-208ENST00000589797 RAD50Q92878 1312 aa17.08■□□□□ 0.32
RETREG3-208ENST00000589797 LETM1O95202 739 aaPredicted RBP17.08■□□□□ 0.32
RETREG3-208ENST00000589797 SYNE4Q8N205 404 aa17.08■□□□□ 0.32
RETREG3-208ENST00000589797 ANTXR1Q9H6X2 564 aa17.08■□□□□ 0.32
RETREG3-208ENST00000589797 DACT1Q9NYF0 836 aa17.08■□□□□ 0.32
RETREG3-208ENST00000589797 XBP1P17861 261 aa17.07■□□□□ 0.32
RETREG3-208ENST00000589797 RBM5P52756 815 aaKnown RBP eCLIP17.07■□□□□ 0.32
RETREG3-208ENST00000589797 SLC12A7Q9Y666 1083 aa17.07■□□□□ 0.32
RETREG3-208ENST00000589797 JAK2O60674 1132 aa17.07■□□□□ 0.32
RETREG3-208ENST00000589797 HSPA4P34932 840 aa17.07■□□□□ 0.32
RETREG3-208ENST00000589797 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
RETREG3-208ENST00000589797 DBNLQ9UJU6 430 aaKnown RBP17.07■□□□□ 0.32
RETREG3-208ENST00000589797 CYP7A1P22680 504 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 HSP90AA4PQ58FG1 418 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 FSIP1Q8NA03 581 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 SETBP1Q9Y6X0 1596 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 GOLGA8AA7E2F4 631 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 RNF113AO15541 343 aaKnown RBP17.06■□□□□ 0.32
RETREG3-208ENST00000589797 ZAP70P43403 619 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 PI16Q6UXB8 463 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 CCDC191Q8NCU4 936 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 PCMTD1Q96MG8 357 aaPredicted RBP17.06■□□□□ 0.32
RETREG3-208ENST00000589797 HMG20BQ9P0W2 317 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 C6orf229H3BNL8 230 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 SNAP23O00161 211 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 SASH1O94885 1247 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 IGKV5-2P06315 115 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
RETREG3-208ENST00000589797 FAM177A1Q8N128 213 aaPredicted RBP17.06■□□□□ 0.32
RETREG3-208ENST00000589797 MAGEB6Q8N7X4 407 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms