RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 ATP5J2-PTCD1G3V325 749 aa15.35■□□□□ 0.05
MBD1-218ENST00000589541 FOXN1O15353 648 aa15.35■□□□□ 0.05
MBD1-218ENST00000589541 FMR1Q06787 632 aaKnown RBP eCLIP15.35■□□□□ 0.05
MBD1-218ENST00000589541 USP50Q70EL3 339 aaPredicted RBP15.35■□□□□ 0.05
MBD1-218ENST00000589541 FAM89AQ96GI7 184 aa15.35■□□□□ 0.05
MBD1-218ENST00000589541 PRKRIP1Q9H875 184 aaPredicted RBP15.35■□□□□ 0.05
MBD1-218ENST00000589541 MBIPQ9NS73 344 aa15.35■□□□□ 0.05
MBD1-218ENST00000589541 GPRC5DQ9NZD1 345 aa15.35■□□□□ 0.05
MBD1-218ENST00000589541 LAMB2P55268 1798 aa15.34■□□□□ 0.05
MBD1-218ENST00000589541 RASSF10A6NK89 507 aa15.34■□□□□ 0.05
MBD1-218ENST00000589541 KIAA2012Q0VF49 1180 aa15.34■□□□□ 0.05
MBD1-218ENST00000589541 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
MBD1-218ENST00000589541 RTL5Q5HYW3 569 aaPredicted RBP15.34■□□□□ 0.05
MBD1-218ENST00000589541 AIDAQ96BJ3 306 aa15.34■□□□□ 0.05
MBD1-218ENST00000589541 HYPKQ9NX55 129 aa15.34■□□□□ 0.05
MBD1-218ENST00000589541 TRAF5O00463 557 aa15.33■□□□□ 0.04
MBD1-218ENST00000589541 RAD17O75943 681 aa15.33■□□□□ 0.04
MBD1-218ENST00000589541 GMPSP49915 693 aaPredicted RBP15.33■□□□□ 0.04
MBD1-218ENST00000589541 ISCA1Q9BUE6 129 aa15.33■□□□□ 0.04
MBD1-218ENST00000589541 ADARB2Q9NS39 739 aaKnown RBP15.33■□□□□ 0.04
MBD1-218ENST00000589541 APAF1O14727 1248 aa15.32■□□□□ 0.04
MBD1-218ENST00000589541 CIAPIN1Q6FI81 312 aa15.32■□□□□ 0.04
MBD1-218ENST00000589541 TMC4Q7Z404 712 aa15.32■□□□□ 0.04
MBD1-218ENST00000589541 ELL2O00472 640 aaPredicted RBP15.31■□□□□ 0.04
MBD1-218ENST00000589541 ZNF853P0CG23 659 aa15.31■□□□□ 0.04
MBD1-218ENST00000589541 CTCFP49711 727 aaPredicted RBP15.31■□□□□ 0.04
MBD1-218ENST00000589541 TNIP1Q15025 636 aa15.31■□□□□ 0.04
MBD1-218ENST00000589541 CELF1Q92879 486 aaKnown RBP15.31■□□□□ 0.04
MBD1-218ENST00000589541 BCL2L13Q9BXK5 485 aa15.31■□□□□ 0.04
MBD1-218ENST00000589541 WBP1LQ9NX94 342 aa15.31■□□□□ 0.04
MBD1-218ENST00000589541 WDR33Q9C0J8 1336 aaKnown RBP15.31■□□□□ 0.04
MBD1-218ENST00000589541 YDJCA8MPS7 323 aa15.3■□□□□ 0.04
MBD1-218ENST00000589541 IRS4O14654 1257 aaPredicted RBP15.3■□□□□ 0.04
MBD1-218ENST00000589541 GOLGA2Q08379 1002 aa15.3■□□□□ 0.04
MBD1-218ENST00000589541 SF3B3Q15393 1217 aaKnown RBP15.3■□□□□ 0.04
MBD1-218ENST00000589541 CST9Q5W186 159 aa15.3■□□□□ 0.04
MBD1-218ENST00000589541 PAXIP1Q6ZW49 1069 aaPredicted RBP15.3■□□□□ 0.04
MBD1-218ENST00000589541 RIC3Q7Z5B4 369 aa15.3■□□□□ 0.04
MBD1-218ENST00000589541 DUOX1Q9NRD9 1551 aa15.3■□□□□ 0.04
MBD1-218ENST00000589541 IFT57Q9NWB7 429 aa15.3■□□□□ 0.04
MBD1-218ENST00000589541 NSFL1CQ9UNZ2 370 aaKnown RBP15.3■□□□□ 0.04
MBD1-218ENST00000589541 TAF1P21675 1872 aa15.29■□□□□ 0.04
MBD1-218ENST00000589541 DDX60Q8IY21 1712 aaKnown RBP15.29■□□□□ 0.04
MBD1-218ENST00000589541 GNAI1P63096 354 aa15.29■□□□□ 0.04
MBD1-218ENST00000589541 CALD1Q05682 793 aaKnown RBP15.29■□□□□ 0.04
MBD1-218ENST00000589541 GRM1Q13255 1194 aa15.29■□□□□ 0.04
MBD1-218ENST00000589541 TRIM28Q13263 835 aaKnown RBP15.29■□□□□ 0.04
MBD1-218ENST00000589541 WASHC4Q2M389 1173 aa15.29■□□□□ 0.04
MBD1-218ENST00000589541 PHAXQ9H814 394 aaKnown RBP15.29■□□□□ 0.04
MBD1-218ENST00000589541 PRDM10Q9NQV6 1147 aa15.29■□□□□ 0.04
MBD1-218ENST00000589541 CDHR2Q9BYE9 1310 aa15.28■□□□□ 0.04
MBD1-218ENST00000589541 SHTN1A0MZ66 631 aa15.28■□□□□ 0.04
MBD1-218ENST00000589541 C6orf229H3BNL8 230 aa15.28■□□□□ 0.04
MBD1-218ENST00000589541 RIMBP2O15034 1052 aa15.28■□□□□ 0.04
MBD1-218ENST00000589541 LBX1P52954 281 aa15.28■□□□□ 0.04
MBD1-218ENST00000589541 CAPNS2Q96L46 248 aa15.28■□□□□ 0.04
MBD1-218ENST00000589541 GLIS2Q9BZE0 524 aaPredicted RBP15.28■□□□□ 0.04
MBD1-218ENST00000589541 LRRC37AA6NMS7 1700 aa15.27■□□□□ 0.04
MBD1-218ENST00000589541 HIRAP54198 1017 aaPredicted RBP15.27■□□□□ 0.04
MBD1-218ENST00000589541 GPSM2P81274 684 aa15.27■□□□□ 0.04
MBD1-218ENST00000589541 MAP2K1Q02750 393 aaPredicted RBP15.27■□□□□ 0.04
MBD1-218ENST00000589541 CYP4F22Q6NT55 531 aa15.27■□□□□ 0.04
MBD1-218ENST00000589541 ZBTB38Q8NAP3 1195 aaPredicted RBP15.27■□□□□ 0.04
MBD1-218ENST00000589541 C8orf58Q8NAV2 365 aa15.27■□□□□ 0.04
MBD1-218ENST00000589541 TRPM4Q8TD43 1214 aa15.27■□□□□ 0.04
MBD1-218ENST00000589541 MYD88Q99836 296 aa15.27■□□□□ 0.04
MBD1-218ENST00000589541 DBNDD1Q9H9R9 158 aa15.27■□□□□ 0.04
MBD1-218ENST00000589541 POLLQ9UGP5 575 aa15.27■□□□□ 0.04
MBD1-218ENST00000589541 CNOT7Q9UIV1 285 aaKnown RBP15.27■□□□□ 0.04
MBD1-218ENST00000589541 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
MBD1-218ENST00000589541 COL4A1P02462 1669 aa15.27■□□□□ 0.03
MBD1-218ENST00000589541 H7C1D1 291 aa15.26■□□□□ 0.03
MBD1-218ENST00000589541 CELF2O95319 508 aaKnown RBP15.26■□□□□ 0.03
MBD1-218ENST00000589541 ECE1P42892 770 aa15.26■□□□□ 0.03
MBD1-218ENST00000589541 RPS8P62241 208 aaKnown RBP15.26■□□□□ 0.03
MBD1-218ENST00000589541 MICALL2Q8IY33 904 aa15.26■□□□□ 0.03
MBD1-218ENST00000589541 GPR101Q96P66 508 aaPredicted RBP15.26■□□□□ 0.03
MBD1-218ENST00000589541 PGAP2Q9UHJ9 254 aa15.26■□□□□ 0.03
MBD1-218ENST00000589541 TLL2Q9Y6L7 1015 aa15.26■□□□□ 0.03
MBD1-218ENST00000589541 PSMD14O00487 310 aa15.25■□□□□ 0.03
MBD1-218ENST00000589541 DOK7Q18PE1 504 aa15.25■□□□□ 0.03
MBD1-218ENST00000589541 ZC3H15Q8WU90 426 aaKnown RBP15.25■□□□□ 0.03
MBD1-218ENST00000589541 JARID2Q92833 1246 aaPredicted RBP15.25■□□□□ 0.03
MBD1-218ENST00000589541 ZNF408Q9H9D4 720 aa15.25■□□□□ 0.03
MBD1-218ENST00000589541 SEC31BQ9NQW1 1179 aa15.25■□□□□ 0.03
MBD1-218ENST00000589541 ECE2O60344 883 aa15.24■□□□□ 0.03
MBD1-218ENST00000589541 HSPA8P11142 646 aaKnown RBP15.24■□□□□ 0.03
MBD1-218ENST00000589541 HSP90B1P14625 803 aaKnown RBP15.24■□□□□ 0.03
MBD1-218ENST00000589541 SAPCD2Q86UD0 394 aa15.24■□□□□ 0.03
MBD1-218ENST00000589541 CCDC191Q8NCU4 936 aa15.24■□□□□ 0.03
MBD1-218ENST00000589541 TBC1D16Q8TBP0 767 aa15.24■□□□□ 0.03
MBD1-218ENST00000589541 EYA3Q99504 573 aa15.24■□□□□ 0.03
MBD1-218ENST00000589541 KCNQ5Q9NR82 932 aa15.24■□□□□ 0.03
MBD1-218ENST00000589541 DDX58O95786 925 aaKnown RBP15.23■□□□□ 0.03
MBD1-218ENST00000589541 PCCAP05165 728 aaPredicted RBP15.23■□□□□ 0.03
MBD1-218ENST00000589541 CCDC30Q5VVM6 783 aa15.23■□□□□ 0.03
MBD1-218ENST00000589541 CDC37L1Q7L3B6 337 aa15.23■□□□□ 0.03
MBD1-218ENST00000589541 SAMD7Q7Z3H4 446 aa15.23■□□□□ 0.03
MBD1-218ENST00000589541 TSPYL6Q8N831 410 aa15.23■□□□□ 0.03
MBD1-218ENST00000589541 DPF2Q92785 391 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms