RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 NEXNQ0ZGT2 675 aa13.43□□□□□ -0.26
TPM4-209ENST00000588483 LTBP1Q14766 1721 aa13.43□□□□□ -0.26
TPM4-209ENST00000588483 SP8Q8IXZ3 490 aa13.43□□□□□ -0.26
TPM4-209ENST00000588483 TRMT2AQ8IZ69 625 aaKnown RBP13.43□□□□□ -0.26
TPM4-209ENST00000588483 ZNF277Q9NRM2 450 aaPredicted RBP13.43□□□□□ -0.26
TPM4-209ENST00000588483 DUOX1Q9NRD9 1551 aa13.42□□□□□ -0.26
TPM4-209ENST00000588483 FZD9O00144 591 aa13.42□□□□□ -0.26
TPM4-209ENST00000588483 PDE8AO60658 829 aa13.42□□□□□ -0.26
TPM4-209ENST00000588483 FKBP5Q13451 457 aaPredicted RBP13.42□□□□□ -0.26
TPM4-209ENST00000588483 DPY19L2Q6NUT2 758 aa13.42□□□□□ -0.26
TPM4-209ENST00000588483 DNAAF4Q8WXU2 420 aa13.42□□□□□ -0.26
TPM4-209ENST00000588483 ZNF428Q96B54 188 aa13.42□□□□□ -0.26
TPM4-209ENST00000588483 L3MBTL3Q96JM7 780 aaPredicted RBP13.42□□□□□ -0.26
TPM4-209ENST00000588483 COL4A1P02462 1669 aa13.42□□□□□ -0.26
TPM4-209ENST00000588483 COL4A5P29400 1685 aa13.42□□□□□ -0.26
TPM4-209ENST00000588483 SCN4AP35499 1836 aa13.41□□□□□ -0.26
TPM4-209ENST00000588483 POTECB2RU33 542 aa13.41□□□□□ -0.26
TPM4-209ENST00000588483 DIEXFQ68CQ4 756 aaKnown RBP13.41□□□□□ -0.26
TPM4-209ENST00000588483 SLC51AQ86UW1 340 aa13.41□□□□□ -0.26
TPM4-209ENST00000588483 LINS1Q8NG48 757 aa13.41□□□□□ -0.26
TPM4-209ENST00000588483 RBM46Q8TBY0 533 aaKnown RBP13.41□□□□□ -0.26
TPM4-209ENST00000588483 RTL9Q8NET4 1388 aa13.41□□□□□ -0.26
TPM4-209ENST00000588483 H7C1W4 665 aa13.4□□□□□ -0.26
TPM4-209ENST00000588483 VEGFAP15692 232 aaPredicted RBP13.4□□□□□ -0.26
TPM4-209ENST00000588483 GCKRQ14397 625 aa13.4□□□□□ -0.26
TPM4-209ENST00000588483 CWF19L2Q2TBE0 894 aaKnown RBP13.4□□□□□ -0.26
TPM4-209ENST00000588483 CCDC152Q4G0S7 254 aa13.4□□□□□ -0.26
TPM4-209ENST00000588483 RTL5Q5HYW3 569 aaPredicted RBP13.4□□□□□ -0.26
TPM4-209ENST00000588483 SUPT20HQ8NEM7 779 aa13.4□□□□□ -0.26
TPM4-209ENST00000588483 CELF1Q92879 486 aaKnown RBP13.4□□□□□ -0.26
TPM4-209ENST00000588483 PLA2G12BQ9BX93 195 aa13.4□□□□□ -0.26
TPM4-209ENST00000588483 TMX4Q9H1E5 349 aaPredicted RBP13.4□□□□□ -0.26
TPM4-209ENST00000588483 RRAGCQ9HB90 399 aa13.4□□□□□ -0.26
TPM4-209ENST00000588483 CT47B1P0C2W7 299 aaPredicted RBP13.39□□□□□ -0.27
TPM4-209ENST00000588483 CASP7P55210 303 aa13.39□□□□□ -0.27
TPM4-209ENST00000588483 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
TPM4-209ENST00000588483 CTSWP56202 376 aa13.38□□□□□ -0.27
TPM4-209ENST00000588483 RPS8P62241 208 aaKnown RBP13.38□□□□□ -0.27
TPM4-209ENST00000588483 KIAA2012Q0VF49 1180 aa13.38□□□□□ -0.27
TPM4-209ENST00000588483 FSTL1Q12841 308 aa13.38□□□□□ -0.27
TPM4-209ENST00000588483 BEND3Q5T5X7 828 aa13.38□□□□□ -0.27
TPM4-209ENST00000588483 DPP8Q6V1X1 898 aaPredicted RBP13.38□□□□□ -0.27
TPM4-209ENST00000588483 MPNDQ8N594 471 aa13.38□□□□□ -0.27
TPM4-209ENST00000588483 JDP2Q8WYK2 163 aa13.38□□□□□ -0.27
TPM4-209ENST00000588483 DDNO94850 711 aaPredicted RBP13.37□□□□□ -0.27
TPM4-209ENST00000588483 HSPA6P17066 643 aa13.37□□□□□ -0.27
TPM4-209ENST00000588483 MIER1Q8N108 512 aa13.37□□□□□ -0.27
TPM4-209ENST00000588483 GPC2Q8N158 579 aa13.37□□□□□ -0.27
TPM4-209ENST00000588483 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
TPM4-209ENST00000588483 TTLL11Q8NHH1 800 aa13.37□□□□□ -0.27
TPM4-209ENST00000588483 CDCA7LQ96GN5 454 aa13.37□□□□□ -0.27
TPM4-209ENST00000588483 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
TPM4-209ENST00000588483 IQCA1LA6NCM1 817 aa13.36□□□□□ -0.27
TPM4-209ENST00000588483 ALDH1L2Q3SY69 923 aa13.36□□□□□ -0.27
TPM4-209ENST00000588483 UBE3BQ7Z3V4 1068 aa13.36□□□□□ -0.27
TPM4-209ENST00000588483 C16orf71Q8IYS4 520 aaPredicted RBP13.36□□□□□ -0.27
TPM4-209ENST00000588483 LARGE2Q8N3Y3 721 aa13.36□□□□□ -0.27
TPM4-209ENST00000588483 SEC31BQ9NQW1 1179 aa13.36□□□□□ -0.27
TPM4-209ENST00000588483 PTPRCP08575 1304 aa13.36□□□□□ -0.27
TPM4-209ENST00000588483 ADAMTSL1Q8N6G6 1762 aa13.35□□□□□ -0.27
TPM4-209ENST00000588483 F6X3S4 739 aa13.35□□□□□ -0.27
TPM4-209ENST00000588483 PPIP5K2O43314 1243 aa13.35□□□□□ -0.27
TPM4-209ENST00000588483 ALDH1L1O75891 902 aa13.35□□□□□ -0.27
TPM4-209ENST00000588483 CSF1RP07333 972 aa13.35□□□□□ -0.27
TPM4-209ENST00000588483 AOC3Q16853 763 aa13.35□□□□□ -0.27
TPM4-209ENST00000588483 JARID2Q92833 1246 aaPredicted RBP13.35□□□□□ -0.27
TPM4-209ENST00000588483 BRPF1P55201 1214 aaPredicted RBP13.34□□□□□ -0.27
TPM4-209ENST00000588483 NIM1KQ8IY84 436 aa13.34□□□□□ -0.27
TPM4-209ENST00000588483 SMC1BQ8NDV3 1235 aa13.34□□□□□ -0.27
TPM4-209ENST00000588483 SSH1Q8WYL5 1049 aa13.34□□□□□ -0.27
TPM4-209ENST00000588483 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
TPM4-209ENST00000588483 ZNRF3Q9ULT6 936 aa13.34□□□□□ -0.27
TPM4-209ENST00000588483 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
TPM4-209ENST00000588483 GPSM2P81274 684 aa13.33□□□□□ -0.28
TPM4-209ENST00000588483 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
TPM4-209ENST00000588483 GREM2Q9H772 168 aa13.33□□□□□ -0.28
TPM4-209ENST00000588483 BSDC1Q9NW68 430 aaPredicted RBP13.33□□□□□ -0.28
TPM4-209ENST00000588483 POLLQ9UGP5 575 aa13.33□□□□□ -0.28
TPM4-209ENST00000588483 UTYO14607 1347 aa13.33□□□□□ -0.28
TPM4-209ENST00000588483 GRM8O00222 908 aa13.32□□□□□ -0.28
TPM4-209ENST00000588483 TBC1D16Q8TBP0 767 aa13.32□□□□□ -0.28
TPM4-209ENST00000588483 EYA3Q99504 573 aa13.32□□□□□ -0.28
TPM4-209ENST00000588483 SRCIN1Q9C0H9 1055 aa13.32□□□□□ -0.28
TPM4-209ENST00000588483 TAF1DQ9H5J8 278 aaPredicted RBP13.32□□□□□ -0.28
TPM4-209ENST00000588483 NSFL1CQ9UNZ2 370 aaKnown RBP13.32□□□□□ -0.28
TPM4-209ENST00000588483 SCNN1DP51172 638 aa13.31□□□□□ -0.28
TPM4-209ENST00000588483 APLP1P51693 650 aa13.31□□□□□ -0.28
TPM4-209ENST00000588483 FOXO4P98177 505 aa13.31□□□□□ -0.28
TPM4-209ENST00000588483 WASHC4Q2M389 1173 aa13.31□□□□□ -0.28
TPM4-209ENST00000588483 HACL1Q9UJ83 578 aa13.31□□□□□ -0.28
TPM4-209ENST00000588483 SPEF2Q9C093 1822 aa13.31□□□□□ -0.28
TPM4-209ENST00000588483 XDHP47989 1333 aa13.31□□□□□ -0.28
TPM4-209ENST00000588483 PSME4Q14997 1843 aa13.3□□□□□ -0.28
TPM4-209ENST00000588483 YDJCA8MPS7 323 aa13.3□□□□□ -0.28
TPM4-209ENST00000588483 ITGA6P23229 1130 aa13.3□□□□□ -0.28
TPM4-209ENST00000588483 CXCL9Q07325 125 aa13.3□□□□□ -0.28
TPM4-209ENST00000588483 FAM161AQ3B820 660 aa13.3□□□□□ -0.28
TPM4-209ENST00000588483 PNMA8AQ86V59 439 aaPredicted RBP13.3□□□□□ -0.28
TPM4-209ENST00000588483 CCDC85AQ96PX6 553 aaPredicted RBP13.3□□□□□ -0.28
TPM4-209ENST00000588483 ZNF609O15014 1411 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms