RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 MVPQ14764 893 aaKnown RBP11.37□□□□□ -0.59
CIRBP-218ENST00000588344 CC2D2BQ6DHV5 1058 aa11.37□□□□□ -0.59
CIRBP-218ENST00000588344 JARID2Q92833 1246 aaPredicted RBP11.37□□□□□ -0.59
CIRBP-218ENST00000588344 CDC5LQ99459 802 aaKnown RBP11.37□□□□□ -0.59
CIRBP-218ENST00000588344 RTL9Q8NET4 1388 aa11.37□□□□□ -0.59
CIRBP-218ENST00000588344 NRXN2Q9P2S2 1712 aa11.37□□□□□ -0.59
CIRBP-218ENST00000588344 NUP98P52948 1817 aa11.37□□□□□ -0.59
CIRBP-218ENST00000588344 FOXO4P98177 505 aa11.36□□□□□ -0.59
CIRBP-218ENST00000588344 IFIT5Q13325 482 aaKnown RBP11.36□□□□□ -0.59
CIRBP-218ENST00000588344 GRAPQ13588 217 aa11.36□□□□□ -0.59
CIRBP-218ENST00000588344 AAMPQ13685 434 aa11.36□□□□□ -0.59
CIRBP-218ENST00000588344 CCDC57Q2TAC2 916 aa11.36□□□□□ -0.59
CIRBP-218ENST00000588344 GRAPLQ8TC17 118 aaPredicted RBP11.36□□□□□ -0.59
CIRBP-218ENST00000588344 PANK1Q8TE04 598 aa11.36□□□□□ -0.59
CIRBP-218ENST00000588344 ANKRD18BA2A2Z9 1011 aa11.35□□□□□ -0.59
CIRBP-218ENST00000588344 RLBP1P12271 317 aa11.35□□□□□ -0.59
CIRBP-218ENST00000588344 RPS8P62241 208 aaKnown RBP11.35□□□□□ -0.59
CIRBP-218ENST00000588344 GPR162Q16538 588 aa11.35□□□□□ -0.59
CIRBP-218ENST00000588344 RABL6Q3YEC7 729 aaPredicted RBP11.35□□□□□ -0.59
CIRBP-218ENST00000588344 LMBR1LQ6UX01 489 aa11.35□□□□□ -0.59
CIRBP-218ENST00000588344 ANKRD18AQ8IVF6 992 aa11.35□□□□□ -0.59
CIRBP-218ENST00000588344 SUCLG2Q96I99 432 aa11.35□□□□□ -0.59
CIRBP-218ENST00000588344 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
CIRBP-218ENST00000588344 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
CIRBP-218ENST00000588344 IGHMBP2P38935 993 aaKnown RBP11.34□□□□□ -0.59
CIRBP-218ENST00000588344 PRPF40BQ6NWY9 871 aaKnown RBP11.34□□□□□ -0.59
CIRBP-218ENST00000588344 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
CIRBP-218ENST00000588344 SP8Q8IXZ3 490 aa11.34□□□□□ -0.59
CIRBP-218ENST00000588344 RTKN2Q8IZC4 609 aa11.34□□□□□ -0.59
CIRBP-218ENST00000588344 MEIS3Q99687 375 aa11.34□□□□□ -0.59
CIRBP-218ENST00000588344 BICC1Q9H694 974 aaKnown RBP11.34□□□□□ -0.59
CIRBP-218ENST00000588344 TNNQ9UQP3 1299 aa11.34□□□□□ -0.59
CIRBP-218ENST00000588344 COG6Q9Y2V7 657 aa11.34□□□□□ -0.59
CIRBP-218ENST00000588344 SUPT16HQ9Y5B9 1047 aaKnown RBP11.34□□□□□ -0.59
CIRBP-218ENST00000588344 PPEF1O14829 653 aaPredicted RBP11.33□□□□□ -0.6
CIRBP-218ENST00000588344 ITGA6P23229 1130 aa11.33□□□□□ -0.6
CIRBP-218ENST00000588344 TAF7LQ5H9L4 462 aa11.33□□□□□ -0.6
CIRBP-218ENST00000588344 C7orf43Q8WVR3 580 aa11.33□□□□□ -0.6
CIRBP-218ENST00000588344 KAZALD1Q96I82 304 aa11.33□□□□□ -0.6
CIRBP-218ENST00000588344 MPHOSPH8Q99549 860 aa11.33□□□□□ -0.6
CIRBP-218ENST00000588344 GREM2Q9H772 168 aa11.33□□□□□ -0.6
CIRBP-218ENST00000588344 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.6
CIRBP-218ENST00000588344 CHMP3Q9Y3E7 222 aa11.33□□□□□ -0.6
CIRBP-218ENST00000588344 ATP6V0A2Q9Y487 856 aa11.33□□□□□ -0.6
CIRBP-218ENST00000588344 MTX1Q13505 466 aa11.32□□□□□ -0.6
CIRBP-218ENST00000588344 CCDC93Q567U6 631 aa11.32□□□□□ -0.6
CIRBP-218ENST00000588344 EPHA10Q5JZY3 1008 aa11.32□□□□□ -0.6
CIRBP-218ENST00000588344 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
CIRBP-218ENST00000588344 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
CIRBP-218ENST00000588344 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
CIRBP-218ENST00000588344 LRRFIP2Q9Y608 721 aaKnown RBP11.32□□□□□ -0.6
CIRBP-218ENST00000588344 ANKRD36CQ5JPF3 1778 aa11.31□□□□□ -0.6
CIRBP-218ENST00000588344 C21orf2O43822 256 aa11.31□□□□□ -0.6
CIRBP-218ENST00000588344 FAM161AQ3B820 660 aa11.31□□□□□ -0.6
CIRBP-218ENST00000588344 C20orf194Q5TEA3 1177 aa11.31□□□□□ -0.6
CIRBP-218ENST00000588344 RPAP2Q8IXW5 612 aaPredicted RBP11.31□□□□□ -0.6
CIRBP-218ENST00000588344 ANKRD44Q8N8A2 993 aa11.31□□□□□ -0.6
CIRBP-218ENST00000588344 CELF1Q92879 486 aaKnown RBP11.31□□□□□ -0.6
CIRBP-218ENST00000588344 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
CIRBP-218ENST00000588344 VPS33BQ9H267 617 aa11.31□□□□□ -0.6
CIRBP-218ENST00000588344 SEC31BQ9NQW1 1179 aa11.31□□□□□ -0.6
CIRBP-218ENST00000588344 ATP8B2P98198 1209 aa11.3□□□□□ -0.6
CIRBP-218ENST00000588344 LDHAL6AQ6ZMR3 332 aa11.3□□□□□ -0.6
CIRBP-218ENST00000588344 SUPT20HQ8NEM7 779 aa11.3□□□□□ -0.6
CIRBP-218ENST00000588344 ANKRD2Q9GZV1 360 aa11.3□□□□□ -0.6
CIRBP-218ENST00000588344 AFDNP55196 1824 aaKnown RBP11.3□□□□□ -0.6
CIRBP-218ENST00000588344 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
CIRBP-218ENST00000588344 SRGAP3O43295 1099 aa11.29□□□□□ -0.6
CIRBP-218ENST00000588344 HMMRO75330 724 aa11.29□□□□□ -0.6
CIRBP-218ENST00000588344 ARHGAP27Q6ZUM4 889 aa11.29□□□□□ -0.6
CIRBP-218ENST00000588344 PSMD1Q99460 953 aa11.29□□□□□ -0.6
CIRBP-218ENST00000588344 CNNM1Q9NRU3 951 aa11.29□□□□□ -0.6
CIRBP-218ENST00000588344 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
CIRBP-218ENST00000588344 CIAO1O76071 339 aa11.28□□□□□ -0.6
CIRBP-218ENST00000588344 YBX3P16989 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
CIRBP-218ENST00000588344 FKBP4Q02790 459 aaKnown RBP eCLIP11.28□□□□□ -0.6
CIRBP-218ENST00000588344 DPP8Q6V1X1 898 aaPredicted RBP11.28□□□□□ -0.6
CIRBP-218ENST00000588344 MPNDQ8N594 471 aa11.28□□□□□ -0.6
CIRBP-218ENST00000588344 COPRSQ9NQ92 184 aa11.28□□□□□ -0.6
CIRBP-218ENST00000588344 MINPP1Q9UNW1 487 aa11.28□□□□□ -0.6
CIRBP-218ENST00000588344 MROH5Q6ZUA9 1318 aa11.28□□□□□ -0.6
CIRBP-218ENST00000588344 LTBP3Q9NS15 1303 aa11.28□□□□□ -0.6
CIRBP-218ENST00000588344 ATP2B4P23634 1241 aa11.27□□□□□ -0.61
CIRBP-218ENST00000588344 PTPN12Q05209 780 aaKnown RBP11.27□□□□□ -0.61
CIRBP-218ENST00000588344 HSP90AB4PQ58FF6 505 aa11.27□□□□□ -0.61
CIRBP-218ENST00000588344 SSH3Q8TE77 659 aa11.27□□□□□ -0.61
CIRBP-218ENST00000588344 EYA3Q99504 573 aa11.27□□□□□ -0.61
CIRBP-218ENST00000588344 RTFDC1Q9BY42 306 aaPredicted RBP11.27□□□□□ -0.61
CIRBP-218ENST00000588344 TAOK3Q9H2K8 898 aa11.27□□□□□ -0.61
CIRBP-218ENST00000588344 ANKIB1Q9P2G1 1089 aa11.27□□□□□ -0.61
CIRBP-218ENST00000588344 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
CIRBP-218ENST00000588344 NSFL1CQ9UNZ2 370 aaKnown RBP11.27□□□□□ -0.61
CIRBP-218ENST00000588344 LEMD3Q9Y2U8 911 aa11.27□□□□□ -0.61
CIRBP-218ENST00000588344 EYA2O00167 538 aa11.26□□□□□ -0.61
CIRBP-218ENST00000588344 IL15P40933 162 aaPredicted RBP11.26□□□□□ -0.61
CIRBP-218ENST00000588344 RFX5P48382 616 aaPredicted RBP11.26□□□□□ -0.61
CIRBP-218ENST00000588344 POLA2Q14181 598 aa11.26□□□□□ -0.61
CIRBP-218ENST00000588344 CEP85Q6P2H3 762 aa11.26□□□□□ -0.61
CIRBP-218ENST00000588344 CRBNQ96SW2 442 aa11.26□□□□□ -0.61
CIRBP-218ENST00000588344 GGA1Q9UJY5 639 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms