RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 LRRC37AA6NMS7 1700 aa20.7■□□□□ 0.9
ERCC1-206ENST00000588300 USP50Q70EL3 339 aaPredicted RBP20.69■□□□□ 0.9
ERCC1-206ENST00000588300 TMC4Q7Z404 712 aa20.69■□□□□ 0.9
ERCC1-206ENST00000588300 ISCA1Q9BUE6 129 aa20.69■□□□□ 0.9
ERCC1-206ENST00000588300 MBIPQ9NS73 344 aa20.69■□□□□ 0.9
ERCC1-206ENST00000588300 VEGFBP49765 207 aa20.68■□□□□ 0.9
ERCC1-206ENST00000588300 CALD1Q05682 793 aaKnown RBP20.67■□□□□ 0.9
ERCC1-206ENST00000588300 CXCL9Q07325 125 aa20.67■□□□□ 0.9
ERCC1-206ENST00000588300 KIAA2012Q0VF49 1180 aa20.67■□□□□ 0.9
ERCC1-206ENST00000588300 ZNF428Q96B54 188 aa20.67■□□□□ 0.9
ERCC1-206ENST00000588300 RASSF10A6NK89 507 aa20.66■□□□□ 0.9
ERCC1-206ENST00000588300 ATP5J2-PTCD1G3V325 749 aa20.66■□□□□ 0.9
ERCC1-206ENST00000588300 APAF1O14727 1248 aa20.66■□□□□ 0.9
ERCC1-206ENST00000588300 ZNF853P0CG23 659 aa20.66■□□□□ 0.9
ERCC1-206ENST00000588300 FAM89AQ96GI7 184 aa20.66■□□□□ 0.9
ERCC1-206ENST00000588300 ADARB2Q9NS39 739 aaKnown RBP20.66■□□□□ 0.9
ERCC1-206ENST00000588300 IFT57Q9NWB7 429 aa20.66■□□□□ 0.9
ERCC1-206ENST00000588300 GPRC5DQ9NZD1 345 aa20.66■□□□□ 0.9
ERCC1-206ENST00000588300 DUOX1Q9NRD9 1551 aa20.66■□□□□ 0.9
ERCC1-206ENST00000588300 TRPM7Q96QT4 1865 aa20.65■□□□□ 0.9
ERCC1-206ENST00000588300 GNAI1P63096 354 aa20.65■□□□□ 0.9
ERCC1-206ENST00000588300 DEFB115Q30KQ5 88 aa20.65■□□□□ 0.9
ERCC1-206ENST00000588300 CIAPIN1Q6FI81 312 aa20.65■□□□□ 0.9
ERCC1-206ENST00000588300 ABT1Q9ULW3 272 aaKnown RBP20.65■□□□□ 0.9
ERCC1-206ENST00000588300 CDHR2Q9BYE9 1310 aa20.64■□□□□ 0.89
ERCC1-206ENST00000588300 SF3B3Q15393 1217 aaKnown RBP20.64■□□□□ 0.89
ERCC1-206ENST00000588300 AIDAQ96BJ3 306 aa20.64■□□□□ 0.89
ERCC1-206ENST00000588300 FOXN1O15353 648 aa20.63■□□□□ 0.89
ERCC1-206ENST00000588300 CAPN15O75808 1086 aa20.63■□□□□ 0.89
ERCC1-206ENST00000588300 GMPSP49915 693 aaPredicted RBP20.63■□□□□ 0.89
ERCC1-206ENST00000588300 GOLGA2Q08379 1002 aa20.63■□□□□ 0.89
ERCC1-206ENST00000588300 TRIM28Q13263 835 aaKnown RBP20.63■□□□□ 0.89
ERCC1-206ENST00000588300 TNIP1Q15025 636 aa20.63■□□□□ 0.89
ERCC1-206ENST00000588300 RIC3Q7Z5B4 369 aa20.63■□□□□ 0.89
ERCC1-206ENST00000588300 RTL5Q5HYW3 569 aaPredicted RBP20.62■□□□□ 0.89
ERCC1-206ENST00000588300 CELF1Q92879 486 aaKnown RBP20.62■□□□□ 0.89
ERCC1-206ENST00000588300 BCL2L13Q9BXK5 485 aa20.62■□□□□ 0.89
ERCC1-206ENST00000588300 IRS4O14654 1257 aaPredicted RBP20.61■□□□□ 0.89
ERCC1-206ENST00000588300 RAD17O75943 681 aa20.61■□□□□ 0.89
ERCC1-206ENST00000588300 WDR33Q9C0J8 1336 aaKnown RBP20.6■□□□□ 0.89
ERCC1-206ENST00000588300 ELL2O00472 640 aaPredicted RBP20.6■□□□□ 0.89
ERCC1-206ENST00000588300 CTCFP49711 727 aaPredicted RBP20.6■□□□□ 0.89
ERCC1-206ENST00000588300 FMR1Q06787 632 aaKnown RBP eCLIP20.6■□□□□ 0.89
ERCC1-206ENST00000588300 PHAXQ9H814 394 aaKnown RBP20.6■□□□□ 0.89
ERCC1-206ENST00000588300 WBP1LQ9NX94 342 aa20.6■□□□□ 0.89
ERCC1-206ENST00000588300 NSFL1CQ9UNZ2 370 aaKnown RBP20.6■□□□□ 0.89
ERCC1-206ENST00000588300 COL4A1P02462 1669 aa20.59■□□□□ 0.89
ERCC1-206ENST00000588300 YDJCA8MPS7 323 aa20.59■□□□□ 0.89
ERCC1-206ENST00000588300 TRAF5O00463 557 aa20.59■□□□□ 0.89
ERCC1-206ENST00000588300 HSP90B1P14625 803 aaKnown RBP20.59■□□□□ 0.89
ERCC1-206ENST00000588300 WASHC4Q2M389 1173 aa20.59■□□□□ 0.89
ERCC1-206ENST00000588300 CHMP4AQ9BY43 222 aa20.59■□□□□ 0.89
ERCC1-206ENST00000588300 PRDM10Q9NQV6 1147 aa20.59■□□□□ 0.89
ERCC1-206ENST00000588300 THSD7BQ9C0I4 1608 aa20.58■□□□□ 0.89
ERCC1-206ENST00000588300 ZBTB38Q8NAP3 1195 aaPredicted RBP20.58■□□□□ 0.89
ERCC1-206ENST00000588300 MYD88Q99836 296 aa20.58■□□□□ 0.89
ERCC1-206ENST00000588300 C6orf229H3BNL8 230 aa20.57■□□□□ 0.88
ERCC1-206ENST00000588300 ECE1P42892 770 aa20.57■□□□□ 0.88
ERCC1-206ENST00000588300 MAP2K1Q02750 393 aaPredicted RBP20.57■□□□□ 0.88
ERCC1-206ENST00000588300 CST9Q5W186 159 aa20.57■□□□□ 0.88
ERCC1-206ENST00000588300 PAXIP1Q6ZW49 1069 aaPredicted RBP20.57■□□□□ 0.88
ERCC1-206ENST00000588300 C8orf58Q8NAV2 365 aa20.57■□□□□ 0.88
ERCC1-206ENST00000588300 RPS8P62241 208 aaKnown RBP20.56■□□□□ 0.88
ERCC1-206ENST00000588300 GPSM2P81274 684 aa20.56■□□□□ 0.88
ERCC1-206ENST00000588300 CCDC30Q5VVM6 783 aa20.56■□□□□ 0.88
ERCC1-206ENST00000588300 CCDC191Q8NCU4 936 aa20.56■□□□□ 0.88
ERCC1-206ENST00000588300 ZC3H15Q8WU90 426 aaKnown RBP20.56■□□□□ 0.88
ERCC1-206ENST00000588300 EYA3Q99504 573 aa20.56■□□□□ 0.88
ERCC1-206ENST00000588300 DBNDD1Q9H9R9 158 aa20.56■□□□□ 0.88
ERCC1-206ENST00000588300 PGAP2Q9UHJ9 254 aa20.56■□□□□ 0.88
ERCC1-206ENST00000588300 CNOT7Q9UIV1 285 aaKnown RBP20.56■□□□□ 0.88
ERCC1-206ENST00000588300 TLL2Q9Y6L7 1015 aa20.56■□□□□ 0.88
ERCC1-206ENST00000588300 H7C1D1 291 aa20.55■□□□□ 0.88
ERCC1-206ENST00000588300 RIMBP2O15034 1052 aa20.55■□□□□ 0.88
ERCC1-206ENST00000588300 DDX58O95786 925 aaKnown RBP20.55■□□□□ 0.88
ERCC1-206ENST00000588300 CAPNS2Q96L46 248 aa20.55■□□□□ 0.88
ERCC1-206ENST00000588300 POLLQ9UGP5 575 aa20.55■□□□□ 0.88
ERCC1-206ENST00000588300 PSMD14O00487 310 aa20.54■□□□□ 0.88
ERCC1-206ENST00000588300 PCCAP05165 728 aaPredicted RBP20.54■□□□□ 0.88
ERCC1-206ENST00000588300 HIRAP54198 1017 aaPredicted RBP20.54■□□□□ 0.88
ERCC1-206ENST00000588300 MICALL2Q8IY33 904 aa20.54■□□□□ 0.88
ERCC1-206ENST00000588300 TRPM4Q8TD43 1214 aa20.54■□□□□ 0.88
ERCC1-206ENST00000588300 DPF2Q92785 391 aa20.54■□□□□ 0.88
ERCC1-206ENST00000588300 GLIS2Q9BZE0 524 aaPredicted RBP20.54■□□□□ 0.88
ERCC1-206ENST00000588300 CWC25Q9NXE8 425 aaPredicted RBP20.54■□□□□ 0.88
ERCC1-206ENST00000588300 CELF2O95319 508 aaKnown RBP20.53■□□□□ 0.88
ERCC1-206ENST00000588300 LBX1P52954 281 aa20.53■□□□□ 0.88
ERCC1-206ENST00000588300 GRM1Q13255 1194 aa20.53■□□□□ 0.88
ERCC1-206ENST00000588300 CCDC152Q4G0S7 254 aa20.53■□□□□ 0.88
ERCC1-206ENST00000588300 CYP4F22Q6NT55 531 aa20.53■□□□□ 0.88
ERCC1-206ENST00000588300 TBC1D16Q8TBP0 767 aa20.53■□□□□ 0.88
ERCC1-206ENST00000588300 METTL22Q9BUU2 404 aaPredicted RBP20.53■□□□□ 0.88
ERCC1-206ENST00000588300 SEC31BQ9NQW1 1179 aa20.53■□□□□ 0.88
ERCC1-206ENST00000588300 ZBTB12Q9Y330 459 aaPredicted RBP20.53■□□□□ 0.88
ERCC1-206ENST00000588300 SHTN1A0MZ66 631 aa20.52■□□□□ 0.88
ERCC1-206ENST00000588300 ECE2O60344 883 aa20.52■□□□□ 0.88
ERCC1-206ENST00000588300 PDE8AO60658 829 aa20.52■□□□□ 0.88
ERCC1-206ENST00000588300 CDC37L1Q7L3B6 337 aa20.52■□□□□ 0.88
ERCC1-206ENST00000588300 PODXL2Q9NZ53 605 aa20.52■□□□□ 0.88
ERCC1-206ENST00000588300 RPS12P25398 132 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms