RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 ATP5J2-PTCD1G3V325 749 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 RABEP1Q15276 862 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 TSHZ3Q63HK5 1081 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 NUTM2AQ8IVF1 878 aaPredicted RBP11.58□□□□□ -0.56
LINC01539-201ENST00000587904 KIF2CQ99661 725 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 ESYT1Q9BSJ8 1104 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 RBM42Q9BTD8 480 aaKnown RBP11.58□□□□□ -0.56
LINC01539-201ENST00000587904 ISCA1Q9BUE6 129 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 TSPYL1Q9H0U9 437 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 ECHDC1Q9NTX5 307 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 NOL7Q9UMY1 257 aaKnown RBP11.58□□□□□ -0.56
LINC01539-201ENST00000587904 PA2G4Q9UQ80 394 aaKnown RBP11.58□□□□□ -0.56
LINC01539-201ENST00000587904 RREB1Q92766 1687 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 ANKRD36CQ5JPF3 1778 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 SPATA31A6Q5VVP1 1343 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 CHMLP26374 656 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 HSP90AB3PQ58FF7 597 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 EPHA10Q5JZY3 1008 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 UNC5CLQ8IV45 518 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 ZBTB3Q9H5J0 574 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 CHMP5Q9NZZ3 219 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 CGNQ9P2M7 1197 aaKnown RBP11.58□□□□□ -0.56
LINC01539-201ENST00000587904 ZNF831Q5JPB2 1677 aa11.58□□□□□ -0.56
LINC01539-201ENST00000587904 MAP3K15Q6ZN16 1313 aa11.57□□□□□ -0.56
LINC01539-201ENST00000587904 CYP19A1P11511 503 aaPredicted RBP11.57□□□□□ -0.56
LINC01539-201ENST00000587904 RFX5P48382 616 aaPredicted RBP11.57□□□□□ -0.56
LINC01539-201ENST00000587904 TCIRG1Q13488 830 aa11.57□□□□□ -0.56
LINC01539-201ENST00000587904 SKOR2Q2VWA4 1001 aaPredicted RBP11.57□□□□□ -0.56
LINC01539-201ENST00000587904 RILPL2Q969X0 211 aa11.57□□□□□ -0.56
LINC01539-201ENST00000587904 SASH1O94885 1247 aa11.56□□□□□ -0.56
LINC01539-201ENST00000587904 PRIM1P49642 420 aaKnown RBP11.56□□□□□ -0.56
LINC01539-201ENST00000587904 VPS72Q15906 364 aa11.56□□□□□ -0.56
LINC01539-201ENST00000587904 AACSQ86V21 672 aa11.56□□□□□ -0.56
LINC01539-201ENST00000587904 MCCP23508 829 aa11.56□□□□□ -0.56
LINC01539-201ENST00000587904 IL6STP40189 918 aaPredicted RBP11.56□□□□□ -0.56
LINC01539-201ENST00000587904 PTPN12Q05209 780 aaKnown RBP11.56□□□□□ -0.56
LINC01539-201ENST00000587904 SYTL4Q96C24 671 aaPredicted RBP11.56□□□□□ -0.56
LINC01539-201ENST00000587904 BCL9LQ86UU0 1499 aa11.56□□□□□ -0.56
LINC01539-201ENST00000587904 PSEN1P49768 467 aa11.55□□□□□ -0.56
LINC01539-201ENST00000587904 FOXO4P98177 505 aa11.55□□□□□ -0.56
LINC01539-201ENST00000587904 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
LINC01539-201ENST00000587904 MARCH10Q8NA82 808 aaPredicted RBP11.55□□□□□ -0.56
LINC01539-201ENST00000587904 GEMIN8Q9NWZ8 242 aaKnown RBP11.55□□□□□ -0.56
LINC01539-201ENST00000587904 CCDC9Q9Y3X0 531 aaKnown RBP11.55□□□□□ -0.56
LINC01539-201ENST00000587904 CCDC66A2RUB6 948 aa11.55□□□□□ -0.56
LINC01539-201ENST00000587904 ERVV-1B6SEH8 477 aa11.55□□□□□ -0.56
LINC01539-201ENST00000587904 PCCAP05165 728 aaPredicted RBP11.55□□□□□ -0.56
LINC01539-201ENST00000587904 ANAPC15P60006 121 aa11.55□□□□□ -0.56
LINC01539-201ENST00000587904 LMBR1LQ6UX01 489 aa11.55□□□□□ -0.56
LINC01539-201ENST00000587904 SMARCC1Q92922 1105 aaPredicted RBP11.55□□□□□ -0.56
LINC01539-201ENST00000587904 SLC4A9Q96Q91 983 aa11.55□□□□□ -0.56
LINC01539-201ENST00000587904 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
LINC01539-201ENST00000587904 CDHR2Q9BYE9 1310 aa11.54□□□□□ -0.56
LINC01539-201ENST00000587904 HIP1O00291 1037 aa11.54□□□□□ -0.56
LINC01539-201ENST00000587904 CBX1P83916 185 aa11.54□□□□□ -0.56
LINC01539-201ENST00000587904 FNBP4Q8N3X1 1017 aaPredicted RBP11.54□□□□□ -0.56
LINC01539-201ENST00000587904 MYRIPQ8NFW9 859 aa11.54□□□□□ -0.56
LINC01539-201ENST00000587904 RUFY2Q8WXA3 655 aa11.54□□□□□ -0.56
LINC01539-201ENST00000587904 EAF2Q96CJ1 260 aaPredicted RBP11.54□□□□□ -0.56
LINC01539-201ENST00000587904 EVI5LQ96CN4 794 aa11.54□□□□□ -0.56
LINC01539-201ENST00000587904 IL17RAQ96F46 866 aa11.54□□□□□ -0.56
LINC01539-201ENST00000587904 PLA2G12BQ9BX93 195 aa11.54□□□□□ -0.56
LINC01539-201ENST00000587904 SIL1Q9H173 461 aa11.54□□□□□ -0.56
LINC01539-201ENST00000587904 K7ELQ4 463 aaPredicted RBP11.53□□□□□ -0.56
LINC01539-201ENST00000587904 GTF2F1P35269 517 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC01539-201ENST00000587904 GPR108Q9NPR9 543 aa11.53□□□□□ -0.56
LINC01539-201ENST00000587904 THSD7AQ9UPZ6 1657 aa11.53□□□□□ -0.56
LINC01539-201ENST00000587904 CIAO1O76071 339 aa11.53□□□□□ -0.56
LINC01539-201ENST00000587904 GABPB1Q06547 395 aaPredicted RBP11.53□□□□□ -0.56
LINC01539-201ENST00000587904 ZBTB38Q8NAP3 1195 aaPredicted RBP11.53□□□□□ -0.56
LINC01539-201ENST00000587904 NGLY1Q96IV0 654 aa11.53□□□□□ -0.56
LINC01539-201ENST00000587904 ARID3AQ99856 593 aa11.53□□□□□ -0.56
LINC01539-201ENST00000587904 ZBTB1Q9Y2K1 713 aa11.53□□□□□ -0.56
LINC01539-201ENST00000587904 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
LINC01539-201ENST00000587904 RFX7Q2KHR2 1363 aa11.53□□□□□ -0.56
LINC01539-201ENST00000587904 SGSM2O43147 1006 aa11.52□□□□□ -0.57
LINC01539-201ENST00000587904 ST18O60284 1047 aa11.52□□□□□ -0.57
LINC01539-201ENST00000587904 IL15P40933 162 aaPredicted RBP11.52□□□□□ -0.57
LINC01539-201ENST00000587904 NASPP49321 788 aaPredicted RBP11.52□□□□□ -0.57
LINC01539-201ENST00000587904 TNNI3KQ59H18 835 aa11.52□□□□□ -0.57
LINC01539-201ENST00000587904 PRIMPOLQ96LW4 560 aa11.52□□□□□ -0.57
LINC01539-201ENST00000587904 C8orf37Q96NL8 207 aa11.52□□□□□ -0.57
LINC01539-201ENST00000587904 ANO2Q9NQ90 1003 aa11.52□□□□□ -0.57
LINC01539-201ENST00000587904 FPGT-TNNI3KV9GXZ4 949 aa11.52□□□□□ -0.57
LINC01539-201ENST00000587904 PALLDQ8WX93 1383 aa11.52□□□□□ -0.57
LINC01539-201ENST00000587904 RAD50Q92878 1312 aa11.52□□□□□ -0.57
LINC01539-201ENST00000587904 COL5A3P25940 1745 aaPredicted RBP11.52□□□□□ -0.57
LINC01539-201ENST00000587904 PTMAP06454 111 aaKnown RBP11.51□□□□□ -0.57
LINC01539-201ENST00000587904 GAS2L3Q86XJ1 694 aa11.51□□□□□ -0.57
LINC01539-201ENST00000587904 TICAM2Q86XR7 235 aa11.51□□□□□ -0.57
LINC01539-201ENST00000587904 CNPY4Q8N129 248 aa11.51□□□□□ -0.57
LINC01539-201ENST00000587904 KLHDC4Q8TBB5 520 aa11.51□□□□□ -0.57
LINC01539-201ENST00000587904 JARID2Q92833 1246 aaPredicted RBP11.51□□□□□ -0.57
LINC01539-201ENST00000587904 DIAPH3Q9NSV4 1193 aa11.51□□□□□ -0.57
LINC01539-201ENST00000587904 CCDC87Q9NVE4 849 aa11.51□□□□□ -0.57
LINC01539-201ENST00000587904 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
LINC01539-201ENST00000587904 NUP98P52948 1817 aa11.51□□□□□ -0.57
LINC01539-201ENST00000587904 LOC102724428A0A0B4J2F2 783 aa11.51□□□□□ -0.57
LINC01539-201ENST00000587904 ZBTB22O15209 634 aa11.51□□□□□ -0.57
LINC01539-201ENST00000587904 SIK1P57059 783 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms