RNA–Protein interactions for RNA: ENST00000587623.1

CTDP1-204, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-204ENST00000587623 UBE3BQ7Z3V4 1068 aa11.02□□□□□ -0.65
CTDP1-204ENST00000587623 SP8Q8IXZ3 490 aa11.02□□□□□ -0.65
CTDP1-204ENST00000587623 JARID2Q92833 1246 aaPredicted RBP11.02□□□□□ -0.65
CTDP1-204ENST00000587623 CDC5LQ99459 802 aaKnown RBP11.02□□□□□ -0.65
CTDP1-204ENST00000587623 PSMD1Q99460 953 aa11.02□□□□□ -0.65
CTDP1-204ENST00000587623 SRCIN1Q9C0H9 1055 aa11.02□□□□□ -0.65
CTDP1-204ENST00000587623 ZNF277Q9NRM2 450 aaPredicted RBP11.02□□□□□ -0.65
CTDP1-204ENST00000587623 C9orf78Q9NZ63 289 aaPredicted RBP11.02□□□□□ -0.65
CTDP1-204ENST00000587623 PTPRCP08575 1304 aa11.02□□□□□ -0.65
CTDP1-204ENST00000587623 CDHR2Q9BYE9 1310 aa11.02□□□□□ -0.65
CTDP1-204ENST00000587623 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
CTDP1-204ENST00000587623 IARSP41252 1262 aaKnown RBP11.01□□□□□ -0.65
CTDP1-204ENST00000587623 CTSWP56202 376 aa11.01□□□□□ -0.65
CTDP1-204ENST00000587623 RPS8P62241 208 aaKnown RBP11.01□□□□□ -0.65
CTDP1-204ENST00000587623 LARGE2Q8N3Y3 721 aa11.01□□□□□ -0.65
CTDP1-204ENST00000587623 MPNDQ8N594 471 aa11.01□□□□□ -0.65
CTDP1-204ENST00000587623 MRPL50Q8N5N7 158 aaKnown RBP11.01□□□□□ -0.65
CTDP1-204ENST00000587623 SSH1Q8WYL5 1049 aa11.01□□□□□ -0.65
CTDP1-204ENST00000587623 GLTPD2A6NH11 291 aa11□□□□□ -0.65
CTDP1-204ENST00000587623 G3V3G9 751 aa11□□□□□ -0.65
CTDP1-204ENST00000587623 ALDH1L1O75891 902 aa11□□□□□ -0.65
CTDP1-204ENST00000587623 EIF6P56537 245 aaKnown RBP11□□□□□ -0.65
CTDP1-204ENST00000587623 DCAF8Q5TAQ9 597 aa11□□□□□ -0.65
CTDP1-204ENST00000587623 OLFM4Q6UX06 510 aa11□□□□□ -0.65
CTDP1-204ENST00000587623 ANKRD18AQ8IVF6 992 aa11□□□□□ -0.65
CTDP1-204ENST00000587623 NIM1KQ8IY84 436 aa11□□□□□ -0.65
CTDP1-204ENST00000587623 TRMT2AQ8IZ69 625 aaKnown RBP11□□□□□ -0.65
CTDP1-204ENST00000587623 CCDC85AQ96PX6 553 aaPredicted RBP11□□□□□ -0.65
CTDP1-204ENST00000587623 BCL2L13Q9BXK5 485 aa11□□□□□ -0.65
CTDP1-204ENST00000587623 CHMP3Q9Y3E7 222 aa11□□□□□ -0.65
CTDP1-204ENST00000587623 H7C1W4 665 aa10.99□□□□□ -0.65
CTDP1-204ENST00000587623 IPO8O15397 1037 aaKnown RBP10.99□□□□□ -0.65
CTDP1-204ENST00000587623 PPIP5K2O43314 1243 aa10.99□□□□□ -0.65
CTDP1-204ENST00000587623 IGHMBP2P38935 993 aaKnown RBP10.99□□□□□ -0.65
CTDP1-204ENST00000587623 TAF7LQ5H9L4 462 aa10.99□□□□□ -0.65
CTDP1-204ENST00000587623 BEND3Q5T5X7 828 aa10.99□□□□□ -0.65
CTDP1-204ENST00000587623 EYA3Q99504 573 aa10.99□□□□□ -0.65
CTDP1-204ENST00000587623 API5Q9BZZ5 524 aaKnown RBP10.99□□□□□ -0.65
CTDP1-204ENST00000587623 VPS33BQ9H267 617 aa10.99□□□□□ -0.65
CTDP1-204ENST00000587623 ANKIB1Q9P2G1 1089 aa10.99□□□□□ -0.65
CTDP1-204ENST00000587623 NSFL1CQ9UNZ2 370 aaKnown RBP10.99□□□□□ -0.65
CTDP1-204ENST00000587623 SBF1O95248 1867 aa10.99□□□□□ -0.65
CTDP1-204ENST00000587623 FER1L6Q2WGJ9 1857 aa10.99□□□□□ -0.65
CTDP1-204ENST00000587623 CCDC88AQ3V6T2 1871 aa10.98□□□□□ -0.65
CTDP1-204ENST00000587623 C6orf229H3BNL8 230 aa10.98□□□□□ -0.65
CTDP1-204ENST00000587623 GRM8O00222 908 aa10.98□□□□□ -0.65
CTDP1-204ENST00000587623 VEGFAP15692 232 aaPredicted RBP10.98□□□□□ -0.65
CTDP1-204ENST00000587623 CELF1Q92879 486 aaKnown RBP10.98□□□□□ -0.65
CTDP1-204ENST00000587623 MPHOSPH8Q99549 860 aa10.98□□□□□ -0.65
CTDP1-204ENST00000587623 RRAGCQ9HB90 399 aa10.98□□□□□ -0.65
CTDP1-204ENST00000587623 HDAC5Q9UQL6 1122 aa10.98□□□□□ -0.65
CTDP1-204ENST00000587623 KIF16BQ96L93 1317 aa10.98□□□□□ -0.65
CTDP1-204ENST00000587623 ANKRD18BA2A2Z9 1011 aa10.97□□□□□ -0.65
CTDP1-204ENST00000587623 CCT4P50991 539 aaKnown RBP10.97□□□□□ -0.65
CTDP1-204ENST00000587623 TTLL11Q8NHH1 800 aa10.97□□□□□ -0.65
CTDP1-204ENST00000587623 PLA2G12BQ9BX93 195 aa10.97□□□□□ -0.65
CTDP1-204ENST00000587623 NMRK2Q9NPI5 230 aa10.97□□□□□ -0.65
CTDP1-204ENST00000587623 SEC31BQ9NQW1 1179 aa10.97□□□□□ -0.65
CTDP1-204ENST00000587623 ZBED9Q6R2W3 1325 aa10.97□□□□□ -0.65
CTDP1-204ENST00000587623 LAMB2P55268 1798 aa10.96□□□□□ -0.65
CTDP1-204ENST00000587623 IQCA1LA6NCM1 817 aa10.96□□□□□ -0.65
CTDP1-204ENST00000587623 PRELPP51888 382 aa10.96□□□□□ -0.65
CTDP1-204ENST00000587623 C1QTNF8P60827 252 aa10.96□□□□□ -0.65
CTDP1-204ENST00000587623 IFIT5Q13325 482 aaKnown RBP10.96□□□□□ -0.65
CTDP1-204ENST00000587623 WASHC4Q2M389 1173 aa10.96□□□□□ -0.65
CTDP1-204ENST00000587623 CCDC57Q2TAC2 916 aa10.96□□□□□ -0.65
CTDP1-204ENST00000587623 GREM2Q9H772 168 aa10.96□□□□□ -0.65
CTDP1-204ENST00000587623 GGA1Q9UJY5 639 aa10.96□□□□□ -0.65
CTDP1-204ENST00000587623 NOB1Q9ULX3 412 aaKnown RBP10.96□□□□□ -0.65
CTDP1-204ENST00000587623 DDX60Q8IY21 1712 aaKnown RBP10.95□□□□□ -0.66
CTDP1-204ENST00000587623 RTL9Q8NET4 1388 aa10.95□□□□□ -0.66
CTDP1-204ENST00000587623 TOMM70O94826 608 aa10.95□□□□□ -0.66
CTDP1-204ENST00000587623 UFL1O94874 794 aa10.95□□□□□ -0.66
CTDP1-204ENST00000587623 ITGA6P23229 1130 aa10.95□□□□□ -0.66
CTDP1-204ENST00000587623 LMOD1P29536 600 aaPredicted RBP10.95□□□□□ -0.66
CTDP1-204ENST00000587623 KCNJ4P48050 445 aa10.95□□□□□ -0.66
CTDP1-204ENST00000587623 RARSP54136 660 aaKnown RBP10.95□□□□□ -0.66
CTDP1-204ENST00000587623 AOC3Q16853 763 aa10.95□□□□□ -0.66
CTDP1-204ENST00000587623 RTFDC1Q9BY42 306 aaPredicted RBP10.95□□□□□ -0.66
CTDP1-204ENST00000587623 ZC3H12CQ9C0D7 883 aaKnown RBP10.95□□□□□ -0.66
CTDP1-204ENST00000587623 GJA3Q9Y6H8 435 aa10.95□□□□□ -0.66
CTDP1-204ENST00000587623 DICER1Q9UPY3 1922 aaKnown RBP10.95□□□□□ -0.66
CTDP1-204ENST00000587623 XDHP47989 1333 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 FZD9O00144 591 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 DDNO94850 711 aaPredicted RBP10.94□□□□□ -0.66
CTDP1-204ENST00000587623 ATP2B4P23634 1241 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 BRPF1P55201 1214 aaPredicted RBP10.94□□□□□ -0.66
CTDP1-204ENST00000587623 GPSM2P81274 684 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 KIAA2012Q0VF49 1180 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 TNIP1Q15025 636 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 FAM161AQ3B820 660 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 LMBR1LQ6UX01 489 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 GPC2Q8N158 579 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 FRAT1Q92837 279 aaPredicted RBP10.94□□□□□ -0.66
CTDP1-204ENST00000587623 ANKRD2Q9GZV1 360 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 BSDC1Q9NW68 430 aaPredicted RBP10.94□□□□□ -0.66
CTDP1-204ENST00000587623 ZNRF3Q9ULT6 936 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 MYH3P11055 1940 aa10.94□□□□□ -0.66
CTDP1-204ENST00000587623 TIAM2Q8IVF5 1701 aa10.93□□□□□ -0.66
CTDP1-204ENST00000587623 KIF3CO14782 793 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms