RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 TMEM94Q12767 1356 aa23.61■■□□□ 1.37
MBD1-216ENST00000587605 CADPS2Q86UW7 1296 aa23.61■■□□□ 1.37
MBD1-216ENST00000587605 FIBPO43427 364 aa23.61■■□□□ 1.37
MBD1-216ENST00000587605 TAF5LO75529 589 aa23.61■■□□□ 1.37
MBD1-216ENST00000587605 U3KPZ7 1027 aaPredicted RBP23.61■■□□□ 1.37
MBD1-216ENST00000587605 ELP1O95163 1332 aa23.6■■□□□ 1.37
MBD1-216ENST00000587605 LARP1BQ659C4 914 aaKnown RBP23.6■■□□□ 1.37
MBD1-216ENST00000587605 KLHDC4Q8TBB5 520 aa23.6■■□□□ 1.37
MBD1-216ENST00000587605 DBNLQ9UJU6 430 aaKnown RBP23.6■■□□□ 1.37
MBD1-216ENST00000587605 UBE3BQ7Z3V4 1068 aa23.59■■□□□ 1.37
MBD1-216ENST00000587605 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.59■■□□□ 1.37
MBD1-216ENST00000587605 VPS37CA5D8V6 355 aaPredicted RBP23.59■■□□□ 1.37
MBD1-216ENST00000587605 KRT85P78386 507 aa23.59■■□□□ 1.37
MBD1-216ENST00000587605 DNM1Q05193 864 aaKnown RBP23.59■■□□□ 1.37
MBD1-216ENST00000587605 TFCP2Q12800 502 aa23.59■■□□□ 1.37
MBD1-216ENST00000587605 HAUS7Q99871 368 aa23.59■■□□□ 1.37
MBD1-216ENST00000587605 A0A087WZG4 1122 aa23.58■■□□□ 1.37
MBD1-216ENST00000587605 CASP7P55210 303 aa23.58■■□□□ 1.37
MBD1-216ENST00000587605 GPR108Q9NPR9 543 aa23.58■■□□□ 1.37
MBD1-216ENST00000587605 NECAB1Q8N987 351 aa23.57■■□□□ 1.36
MBD1-216ENST00000587605 SPATA31A3Q5VYP0 1347 aa23.57■■□□□ 1.36
MBD1-216ENST00000587605 ZNF589Q86UQ0 364 aaPredicted RBP23.57■■□□□ 1.36
MBD1-216ENST00000587605 PTMAP06454 111 aaKnown RBP23.56■■□□□ 1.36
MBD1-216ENST00000587605 UBR2Q8IWV8 1755 aa23.56■■□□□ 1.36
MBD1-216ENST00000587605 TOB2Q14106 344 aaPredicted RBP23.55■■□□□ 1.36
MBD1-216ENST00000587605 MCMDC2Q4G0Z9 681 aa23.55■■□□□ 1.36
MBD1-216ENST00000587605 SH3TC1Q8TE82 1336 aa23.55■■□□□ 1.36
MBD1-216ENST00000587605 NUP188Q5SRE5 1749 aa23.55■■□□□ 1.36
MBD1-216ENST00000587605 H7C1W4 665 aa23.55■■□□□ 1.36
MBD1-216ENST00000587605 SCAND2PQ9GZW5 306 aaPredicted RBP23.55■■□□□ 1.36
MBD1-216ENST00000587605 PCDH11XQ9BZA7 1347 aa23.54■■□□□ 1.36
MBD1-216ENST00000587605 PCDH11YQ9BZA8 1340 aa23.54■■□□□ 1.36
MBD1-216ENST00000587605 PALLDQ8WX93 1383 aa23.54■■□□□ 1.36
MBD1-216ENST00000587605 STRCP1A6NGW2 1772 aa23.54■■□□□ 1.36
MBD1-216ENST00000587605 FUCA2Q9BTY2 467 aa23.54■■□□□ 1.36
MBD1-216ENST00000587605 ERVV-2B6SEH9 535 aa23.53■■□□□ 1.36
MBD1-216ENST00000587605 NEK1Q96PY6 1258 aa23.53■■□□□ 1.36
MBD1-216ENST00000587605 ZNF609O15014 1411 aa23.53■■□□□ 1.36
MBD1-216ENST00000587605 HMGB1P09429 215 aaKnown RBP23.53■■□□□ 1.36
MBD1-216ENST00000587605 KBTBD3Q8NAB2 608 aa23.53■■□□□ 1.36
MBD1-216ENST00000587605 CWC25Q9NXE8 425 aaPredicted RBP23.53■■□□□ 1.36
MBD1-216ENST00000587605 SPEF2Q9C093 1822 aa23.53■■□□□ 1.36
MBD1-216ENST00000587605 PAPPAQ13219 1627 aa23.52■■□□□ 1.36
MBD1-216ENST00000587605 CHRNA2Q15822 529 aa23.52■■□□□ 1.36
MBD1-216ENST00000587605 DDX54Q8TDD1 881 aaKnown RBP23.52■■□□□ 1.36
MBD1-216ENST00000587605 DBNDD2Q9BQY9 259 aa23.52■■□□□ 1.36
MBD1-216ENST00000587605 LMBR1LQ6UX01 489 aa23.51■■□□□ 1.35
MBD1-216ENST00000587605 HELLSQ9NRZ9 838 aa23.51■■□□□ 1.35
MBD1-216ENST00000587605 ATP5J2-PTCD1G3V325 749 aa23.51■■□□□ 1.35
MBD1-216ENST00000587605 RRP9O43818 475 aaKnown RBP23.51■■□□□ 1.35
MBD1-216ENST00000587605 PTCD1O75127 700 aaKnown RBP23.51■■□□□ 1.35
MBD1-216ENST00000587605 IL15P40933 162 aaPredicted RBP23.51■■□□□ 1.35
MBD1-216ENST00000587605 FOXO4P98177 505 aa23.51■■□□□ 1.35
MBD1-216ENST00000587605 GTF3C6Q969F1 213 aa23.51■■□□□ 1.35
MBD1-216ENST00000587605 ATG3Q9NT62 314 aa23.51■■□□□ 1.35
MBD1-216ENST00000587605 CCDC192P0DO97 292 aa23.5■■□□□ 1.35
MBD1-216ENST00000587605 CDC37L1Q7L3B6 337 aa23.5■■□□□ 1.35
MBD1-216ENST00000587605 CABLES1Q8TDN4 633 aa23.5■■□□□ 1.35
MBD1-216ENST00000587605 DNAJC2Q99543 621 aaKnown RBP23.5■■□□□ 1.35
MBD1-216ENST00000587605 TJP1Q07157 1748 aa23.5■■□□□ 1.35
MBD1-216ENST00000587605 HCLS1P14317 486 aaPredicted RBP23.49■■□□□ 1.35
MBD1-216ENST00000587605 KIAA2012Q0VF49 1180 aa23.49■■□□□ 1.35
MBD1-216ENST00000587605 CCDC191Q8NCU4 936 aa23.49■■□□□ 1.35
MBD1-216ENST00000587605 DDX17Q92841 729 aaKnown RBP23.49■■□□□ 1.35
MBD1-216ENST00000587605 EDC3Q96F86 508 aaKnown RBP23.49■■□□□ 1.35
MBD1-216ENST00000587605 KDM4AO75164 1064 aa23.49■■□□□ 1.35
MBD1-216ENST00000587605 ZCRB1Q8TBF4 217 aaKnown RBP23.49■■□□□ 1.35
MBD1-216ENST00000587605 CHMP4CQ96CF2 233 aa23.49■■□□□ 1.35
MBD1-216ENST00000587605 LLPHQ9BRT6 129 aaKnown RBP23.49■■□□□ 1.35
MBD1-216ENST00000587605 WDR17Q8IZU2 1322 aa23.49■■□□□ 1.35
MBD1-216ENST00000587605 CIAO1O76071 339 aa23.48■■□□□ 1.35
MBD1-216ENST00000587605 DSCC1Q9BVC3 393 aa23.48■■□□□ 1.35
MBD1-216ENST00000587605 KCPQ6ZWJ8 1503 aa23.47■■□□□ 1.35
MBD1-216ENST00000587605 PIP4K2AP48426 406 aaPredicted RBP23.47■■□□□ 1.35
MBD1-216ENST00000587605 NKX1-1Q15270 411 aaPredicted RBP23.47■■□□□ 1.35
MBD1-216ENST00000587605 TTC6Q86TZ1 520 aa23.47■■□□□ 1.35
MBD1-216ENST00000587605 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.47■■□□□ 1.35
MBD1-216ENST00000587605 JARID2Q92833 1246 aaPredicted RBP23.47■■□□□ 1.35
MBD1-216ENST00000587605 USP25Q9UHP3 1055 aa23.47■■□□□ 1.35
MBD1-216ENST00000587605 TAF6LQ9Y6J9 622 aa23.47■■□□□ 1.35
MBD1-216ENST00000587605 NBPF26B4DH59 902 aa23.47■■□□□ 1.35
MBD1-216ENST00000587605 ADCY5O95622 1261 aa23.47■■□□□ 1.35
MBD1-216ENST00000587605 TPM3P06753 285 aa23.47■■□□□ 1.35
MBD1-216ENST00000587605 NBPF14Q5TI25 921 aa23.47■■□□□ 1.35
MBD1-216ENST00000587605 NBPF10Q6P3W6 841 aaKnown RBP23.47■■□□□ 1.35
MBD1-216ENST00000587605 NBPF15Q8N660 670 aa23.47■■□□□ 1.35
MBD1-216ENST00000587605 DDX19AQ9NUU7 478 aaKnown RBP23.47■■□□□ 1.35
MBD1-216ENST00000587605 GIMAP6Q6P9H5 292 aa23.46■■□□□ 1.35
MBD1-216ENST00000587605 ATG9AQ7Z3C6 839 aa23.46■■□□□ 1.35
MBD1-216ENST00000587605 NUP62CLQ9H1M0 184 aa23.46■■□□□ 1.35
MBD1-216ENST00000587605 ZSCAN16Q9H4T2 348 aaPredicted RBP23.46■■□□□ 1.35
MBD1-216ENST00000587605 PAG1Q9NWQ8 432 aa23.46■■□□□ 1.35
MBD1-216ENST00000587605 KIF3AQ9Y496 699 aa23.46■■□□□ 1.35
MBD1-216ENST00000587605 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.46■■□□□ 1.35
MBD1-216ENST00000587605 MAP3K11Q16584 847 aa23.45■■□□□ 1.35
MBD1-216ENST00000587605 TCEANC2Q96MN5 208 aa23.45■■□□□ 1.35
MBD1-216ENST00000587605 GOLGA6L4A6NEF3 574 aa23.45■■□□□ 1.34
MBD1-216ENST00000587605 CYP21A2P08686 494 aa23.45■■□□□ 1.34
MBD1-216ENST00000587605 LRRFIP1Q32MZ4 808 aaKnown RBP23.45■■□□□ 1.34
MBD1-216ENST00000587605 Q6ZUG5 572 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms