RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 MPNDQ8N594 471 aa25.86■■□□□ 1.73
VAT1-203ENST00000587062 SPINK5Q9NQ38 1064 aaPredicted RBP25.86■■□□□ 1.73
VAT1-203ENST00000587062 EIF6P56537 245 aaKnown RBP25.85■■□□□ 1.73
VAT1-203ENST00000587062 CCDC152Q4G0S7 254 aa25.85■■□□□ 1.73
VAT1-203ENST00000587062 G2E3Q7L622 706 aa25.85■■□□□ 1.73
VAT1-203ENST00000587062 LARGE2Q8N3Y3 721 aa25.85■■□□□ 1.73
VAT1-203ENST00000587062 ZNF521Q96K83 1311 aa25.85■■□□□ 1.73
VAT1-203ENST00000587062 LAMB2P55268 1798 aa25.84■■□□□ 1.73
VAT1-203ENST00000587062 DNAAF4Q8WXU2 420 aa25.84■■□□□ 1.73
VAT1-203ENST00000587062 IQCA1LA6NCM1 817 aa25.83■■□□□ 1.73
VAT1-203ENST00000587062 FSTL1Q12841 308 aa25.83■■□□□ 1.73
VAT1-203ENST00000587062 DIEXFQ68CQ4 756 aaKnown RBP25.83■■□□□ 1.73
VAT1-203ENST00000587062 CDHR2Q9BYE9 1310 aa25.83■■□□□ 1.73
VAT1-203ENST00000587062 DDNO94850 711 aaPredicted RBP25.82■■□□□ 1.72
VAT1-203ENST00000587062 HSPA6P17066 643 aa25.82■■□□□ 1.72
VAT1-203ENST00000587062 NIM1KQ8IY84 436 aa25.82■■□□□ 1.72
VAT1-203ENST00000587062 DDX60Q8IY21 1712 aaKnown RBP25.82■■□□□ 1.72
VAT1-203ENST00000587062 NEURL1BA8MQ27 555 aa25.81■■□□□ 1.72
VAT1-203ENST00000587062 PPIP5K2O43314 1243 aa25.81■■□□□ 1.72
VAT1-203ENST00000587062 RPS8P62241 208 aaKnown RBP25.81■■□□□ 1.72
VAT1-203ENST00000587062 SMC1BQ8NDV3 1235 aa25.81■■□□□ 1.72
VAT1-203ENST00000587062 FZD9O00144 591 aa25.8■■□□□ 1.72
VAT1-203ENST00000587062 IGKV5-2P06315 115 aa25.8■■□□□ 1.72
VAT1-203ENST00000587062 LINS1Q8NG48 757 aa25.8■■□□□ 1.72
VAT1-203ENST00000587062 RTFDC1Q9BY42 306 aaPredicted RBP25.8■■□□□ 1.72
VAT1-203ENST00000587062 CWF19L2Q2TBE0 894 aaKnown RBP25.79■■□□□ 1.72
VAT1-203ENST00000587062 WDR90Q96KV7 1748 aa25.79■■□□□ 1.72
VAT1-203ENST00000587062 SNED1Q8TER0 1413 aa25.79■■□□□ 1.72
VAT1-203ENST00000587062 GPC2Q8N158 579 aa25.78■■□□□ 1.72
VAT1-203ENST00000587062 SLFN5Q08AF3 891 aa25.77■■□□□ 1.72
VAT1-203ENST00000587062 CELF1Q92879 486 aaKnown RBP25.77■■□□□ 1.72
VAT1-203ENST00000587062 CDC5LQ99459 802 aaKnown RBP25.77■■□□□ 1.72
VAT1-203ENST00000587062 NSFL1CQ9UNZ2 370 aaKnown RBP25.77■■□□□ 1.72
VAT1-203ENST00000587062 GCKRQ14397 625 aa25.76■■□□□ 1.71
VAT1-203ENST00000587062 ANKRD18AQ8IVF6 992 aa25.76■■□□□ 1.71
VAT1-203ENST00000587062 JARID2Q92833 1246 aaPredicted RBP25.76■■□□□ 1.71
VAT1-203ENST00000587062 L3MBTL3Q96JM7 780 aaPredicted RBP25.76■■□□□ 1.71
VAT1-203ENST00000587062 H7C1W4 665 aa25.75■■□□□ 1.71
VAT1-203ENST00000587062 APLP1P51693 650 aa25.75■■□□□ 1.71
VAT1-203ENST00000587062 CTSWP56202 376 aa25.75■■□□□ 1.71
VAT1-203ENST00000587062 AOC3Q16853 763 aa25.75■■□□□ 1.71
VAT1-203ENST00000587062 UBE3BQ7Z3V4 1068 aa25.75■■□□□ 1.71
VAT1-203ENST00000587062 EYA3Q99504 573 aa25.75■■□□□ 1.71
VAT1-203ENST00000587062 HACL1Q9UJ83 578 aa25.74■■□□□ 1.71
VAT1-203ENST00000587062 ZNF541Q9H0D2 1346 aa25.73■■□□□ 1.71
VAT1-203ENST00000587062 LMOD1P29536 600 aaPredicted RBP25.73■■□□□ 1.71
VAT1-203ENST00000587062 KIAA2012Q0VF49 1180 aa25.73■■□□□ 1.71
VAT1-203ENST00000587062 ZNRF3Q9ULT6 936 aa25.73■■□□□ 1.71
VAT1-203ENST00000587062 GJA3Q9Y6H8 435 aa25.73■■□□□ 1.71
VAT1-203ENST00000587062 POTECB2RU33 542 aa25.72■■□□□ 1.71
VAT1-203ENST00000587062 C6orf229H3BNL8 230 aa25.72■■□□□ 1.71
VAT1-203ENST00000587062 WASHC4Q2M389 1173 aa25.72■■□□□ 1.71
VAT1-203ENST00000587062 SEC31BQ9NQW1 1179 aa25.72■■□□□ 1.71
VAT1-203ENST00000587062 ANKIB1Q9P2G1 1089 aa25.72■■□□□ 1.71
VAT1-203ENST00000587062 PNMA8AQ86V59 439 aaPredicted RBP25.71■■□□□ 1.71
VAT1-203ENST00000587062 TTLL11Q8NHH1 800 aa25.71■■□□□ 1.71
VAT1-203ENST00000587062 CCDC85AQ96PX6 553 aaPredicted RBP25.71■■□□□ 1.71
VAT1-203ENST00000587062 SCN4AP35499 1836 aa25.71■■□□□ 1.71
VAT1-203ENST00000587062 TAF1P21675 1872 aa25.7■■□□□ 1.71
VAT1-203ENST00000587062 F6X3S4 739 aa25.7■■□□□ 1.7
VAT1-203ENST00000587062 G3V3G9 751 aa25.7■■□□□ 1.7
VAT1-203ENST00000587062 CT47B1P0C2W7 299 aaPredicted RBP25.7■■□□□ 1.7
VAT1-203ENST00000587062 TNIP1Q15025 636 aa25.7■■□□□ 1.7
VAT1-203ENST00000587062 DCAF8Q5TAQ9 597 aa25.7■■□□□ 1.7
VAT1-203ENST00000587062 PLA2G12BQ9BX93 195 aa25.7■■□□□ 1.7
VAT1-203ENST00000587062 BEND3Q5T5X7 828 aa25.69■■□□□ 1.7
VAT1-203ENST00000587062 SLC4A10Q6U841 1118 aa25.69■■□□□ 1.7
VAT1-203ENST00000587062 ZC3H12CQ9C0D7 883 aaKnown RBP25.69■■□□□ 1.7
VAT1-203ENST00000587062 TAF1DQ9H5J8 278 aaPredicted RBP25.69■■□□□ 1.7
VAT1-203ENST00000587062 C9orf78Q9NZ63 289 aaPredicted RBP25.69■■□□□ 1.7
VAT1-203ENST00000587062 PTPRCP08575 1304 aa25.68■■□□□ 1.7
VAT1-203ENST00000587062 ALDH1L1O75891 902 aa25.68■■□□□ 1.7
VAT1-203ENST00000587062 IGHMBP2P38935 993 aaKnown RBP25.68■■□□□ 1.7
VAT1-203ENST00000587062 GPSM2P81274 684 aa25.68■■□□□ 1.7
VAT1-203ENST00000587062 ALDH1L2Q3SY69 923 aa25.68■■□□□ 1.7
VAT1-203ENST00000587062 SRCIN1Q9C0H9 1055 aa25.68■■□□□ 1.7
VAT1-203ENST00000587062 PODXL2Q9NZ53 605 aa25.68■■□□□ 1.7
VAT1-203ENST00000587062 MYH3P11055 1940 aa25.67■■□□□ 1.7
VAT1-203ENST00000587062 LRRC37AA6NMS7 1700 aa25.67■■□□□ 1.7
VAT1-203ENST00000587062 EPHX2P34913 555 aa25.67■■□□□ 1.7
VAT1-203ENST00000587062 CHADLQ6NUI6 762 aa25.67■■□□□ 1.7
VAT1-203ENST00000587062 LDHDQ86WU2 507 aa25.67■■□□□ 1.7
VAT1-203ENST00000587062 MIER1Q8N108 512 aa25.67■■□□□ 1.7
VAT1-203ENST00000587062 GGA1Q9UJY5 639 aa25.67■■□□□ 1.7
VAT1-203ENST00000587062 RTL9Q8NET4 1388 aa25.67■■□□□ 1.7
VAT1-203ENST00000587062 EAPPQ56P03 285 aaPredicted RBP25.66■■□□□ 1.7
VAT1-203ENST00000587062 CIAPIN1Q6FI81 312 aa25.66■■□□□ 1.7
VAT1-203ENST00000587062 MRPL50Q8N5N7 158 aaKnown RBP25.66■■□□□ 1.7
VAT1-203ENST00000587062 CDCA7LQ96GN5 454 aa25.66■■□□□ 1.7
VAT1-203ENST00000587062 BSDC1Q9NW68 430 aaPredicted RBP25.66■■□□□ 1.7
VAT1-203ENST00000587062 CLEC11AQ9Y240 323 aa25.66■■□□□ 1.7
VAT1-203ENST00000587062 SLC51AQ86UW1 340 aa25.65■■□□□ 1.7
VAT1-203ENST00000587062 TBC1D16Q8TBP0 767 aa25.65■■□□□ 1.7
VAT1-203ENST00000587062 MPHOSPH8Q99549 860 aa25.65■■□□□ 1.7
VAT1-203ENST00000587062 GREM2Q9H772 168 aa25.65■■□□□ 1.7
VAT1-203ENST00000587062 XDHP47989 1333 aa25.64■■□□□ 1.7
VAT1-203ENST00000587062 GRM8O00222 908 aa25.64■■□□□ 1.7
VAT1-203ENST00000587062 RIMBP2O15034 1052 aa25.64■■□□□ 1.7
VAT1-203ENST00000587062 TRMT2AQ8IZ69 625 aaKnown RBP25.64■■□□□ 1.7
VAT1-203ENST00000587062 POLLQ9UGP5 575 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms