RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 RUNDC1Q96C34 613 aa10.48□□□□□ -0.73
CAPNS1-203ENST00000586963 PGAP2Q9UHJ9 254 aa10.48□□□□□ -0.73
CAPNS1-203ENST00000586963 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
CAPNS1-203ENST00000586963 MYBBP1AQ9BQG0 1328 aaKnown RBP10.48□□□□□ -0.73
CAPNS1-203ENST00000586963 CDHR2Q9BYE9 1310 aa10.48□□□□□ -0.73
CAPNS1-203ENST00000586963 LTBP1Q14766 1721 aa10.47□□□□□ -0.73
CAPNS1-203ENST00000586963 GMPSP49915 693 aaPredicted RBP10.47□□□□□ -0.73
CAPNS1-203ENST00000586963 LBX1P52954 281 aa10.47□□□□□ -0.73
CAPNS1-203ENST00000586963 FMR1Q06787 632 aaKnown RBP eCLIP10.47□□□□□ -0.73
CAPNS1-203ENST00000586963 KRT24Q2M2I5 525 aa10.47□□□□□ -0.73
CAPNS1-203ENST00000586963 ANKRD13DQ6ZTN6 518 aa10.47□□□□□ -0.73
CAPNS1-203ENST00000586963 ZC3H15Q8WU90 426 aaKnown RBP10.47□□□□□ -0.73
CAPNS1-203ENST00000586963 CAPNS2Q96L46 248 aa10.47□□□□□ -0.73
CAPNS1-203ENST00000586963 CHPF2Q9P2E5 772 aa10.47□□□□□ -0.73
CAPNS1-203ENST00000586963 DBF4Q9UBU7 674 aaPredicted RBP10.47□□□□□ -0.73
CAPNS1-203ENST00000586963 TLL2Q9Y6L7 1015 aa10.47□□□□□ -0.73
CAPNS1-203ENST00000586963 TRAF5O00463 557 aa10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 HSPA8P11142 646 aaKnown RBP10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 TRIM28Q13263 835 aaKnown RBP10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 WDR43Q15061 677 aaKnown RBP eCLIP10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 SF3B3Q15393 1217 aaKnown RBP10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 HDGFL1Q5TGJ6 251 aa10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 CCDC146Q8IYE0 955 aa10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 CFAP44Q96MT7 982 aa10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 GPR101Q96P66 508 aaPredicted RBP10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 ISCA1Q9BUE6 129 aa10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 HYPKQ9NX55 129 aa10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 LAS1LQ9Y4W2 734 aaKnown RBP10.46□□□□□ -0.73
CAPNS1-203ENST00000586963 RAD17O75943 681 aa10.45□□□□□ -0.74
CAPNS1-203ENST00000586963 MAP2K2P36507 400 aa10.45□□□□□ -0.74
CAPNS1-203ENST00000586963 DDX10Q13206 875 aaKnown RBP10.45□□□□□ -0.74
CAPNS1-203ENST00000586963 CYP4F22Q6NT55 531 aa10.45□□□□□ -0.74
CAPNS1-203ENST00000586963 DPF2Q92785 391 aa10.45□□□□□ -0.74
CAPNS1-203ENST00000586963 HHIPL1Q96JK4 782 aa10.45□□□□□ -0.74
CAPNS1-203ENST00000586963 BCL2L13Q9BXK5 485 aa10.45□□□□□ -0.74
CAPNS1-203ENST00000586963 CNOT7Q9UIV1 285 aaKnown RBP10.45□□□□□ -0.74
CAPNS1-203ENST00000586963 ADAMTS8Q9UP79 889 aa10.45□□□□□ -0.74
CAPNS1-203ENST00000586963 YDJCA8MPS7 323 aa10.44□□□□□ -0.74
CAPNS1-203ENST00000586963 H7C1D1 291 aa10.44□□□□□ -0.74
CAPNS1-203ENST00000586963 HIRAP54198 1017 aaPredicted RBP10.44□□□□□ -0.74
CAPNS1-203ENST00000586963 WASHC4Q2M389 1173 aa10.44□□□□□ -0.74
CAPNS1-203ENST00000586963 PAXIP1Q6ZW49 1069 aaPredicted RBP10.44□□□□□ -0.74
CAPNS1-203ENST00000586963 CDC37L1Q7L3B6 337 aa10.44□□□□□ -0.74
CAPNS1-203ENST00000586963 SAPCD2Q86UD0 394 aa10.44□□□□□ -0.74
CAPNS1-203ENST00000586963 FAM89AQ96GI7 184 aa10.44□□□□□ -0.74
CAPNS1-203ENST00000586963 BEGAINQ9BUH8 593 aa10.44□□□□□ -0.74
CAPNS1-203ENST00000586963 ATP5J2-PTCD1G3V325 749 aa10.43□□□□□ -0.74
CAPNS1-203ENST00000586963 CELF2O95319 508 aaKnown RBP10.43□□□□□ -0.74
CAPNS1-203ENST00000586963 ZNF853P0CG23 659 aa10.43□□□□□ -0.74
CAPNS1-203ENST00000586963 DUSP27Q5VZP5 1158 aa10.43□□□□□ -0.74
CAPNS1-203ENST00000586963 CELF1Q92879 486 aaKnown RBP10.43□□□□□ -0.74
CAPNS1-203ENST00000586963 GLIS2Q9BZE0 524 aaPredicted RBP10.43□□□□□ -0.74
CAPNS1-203ENST00000586963 NSFL1CQ9UNZ2 370 aaKnown RBP10.43□□□□□ -0.74
CAPNS1-203ENST00000586963 ANKRD36CQ5JPF3 1778 aa10.42□□□□□ -0.74
CAPNS1-203ENST00000586963 IRS4O14654 1257 aaPredicted RBP10.42□□□□□ -0.74
CAPNS1-203ENST00000586963 HSP90B1P14625 803 aaKnown RBP10.42□□□□□ -0.74
CAPNS1-203ENST00000586963 RPS12P25398 132 aaKnown RBP10.42□□□□□ -0.74
CAPNS1-203ENST00000586963 RPS8P62241 208 aaKnown RBP10.42□□□□□ -0.74
CAPNS1-203ENST00000586963 TRPM4Q8TD43 1214 aa10.42□□□□□ -0.74
CAPNS1-203ENST00000586963 EYA3Q99504 573 aa10.42□□□□□ -0.74
CAPNS1-203ENST00000586963 MBIPQ9NS73 344 aa10.42□□□□□ -0.74
CAPNS1-203ENST00000586963 POLLQ9UGP5 575 aa10.42□□□□□ -0.74
CAPNS1-203ENST00000586963 C6orf229H3BNL8 230 aa10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 PSMD14O00487 310 aa10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 CA12O43570 354 aa10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 AOC2O75106 756 aa10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 GPSM2P81274 684 aa10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 CALD1Q05682 793 aaKnown RBP10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 GRM1Q13255 1194 aa10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 MICALL2Q8IY33 904 aa10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 ZBTB38Q8NAP3 1195 aaPredicted RBP10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 CHMP4AQ9BY43 222 aa10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 IFT57Q9NWB7 429 aa10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 PODXL2Q9NZ53 605 aa10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
CAPNS1-203ENST00000586963 DUOX1Q9NRD9 1551 aa10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 RIMBP2O15034 1052 aa10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 BRPF1P55201 1214 aaPredicted RBP10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 GNAI1P63096 354 aa10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 GOLGA2Q08379 1002 aa10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 RTL5Q5HYW3 569 aaPredicted RBP10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 RIC3Q7Z5B4 369 aa10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 CCDC191Q8NCU4 936 aa10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 TBC1D16Q8TBP0 767 aa10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 ZNF428Q96B54 188 aa10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 ABHD8Q96I13 439 aa10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 PRKRIP1Q9H875 184 aaPredicted RBP10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 DBNDD1Q9H9R9 158 aa10.4□□□□□ -0.74
CAPNS1-203ENST00000586963 THSD7BQ9C0I4 1608 aa10.4□□□□□ -0.75
CAPNS1-203ENST00000586963 LAMB2P55268 1798 aa10.39□□□□□ -0.75
CAPNS1-203ENST00000586963 TRPM7Q96QT4 1865 aa10.39□□□□□ -0.75
CAPNS1-203ENST00000586963 SHTN1A0MZ66 631 aa10.39□□□□□ -0.75
CAPNS1-203ENST00000586963 ECE2O60344 883 aa10.39□□□□□ -0.75
CAPNS1-203ENST00000586963 VIL1P09327 827 aaKnown RBP10.39□□□□□ -0.75
CAPNS1-203ENST00000586963 SAMD7Q7Z3H4 446 aa10.39□□□□□ -0.75
CAPNS1-203ENST00000586963 USP48Q86UV5 1035 aa10.39□□□□□ -0.75
CAPNS1-203ENST00000586963 ZC3H12CQ9C0D7 883 aaKnown RBP10.39□□□□□ -0.75
CAPNS1-203ENST00000586963 PHAXQ9H814 394 aaKnown RBP10.39□□□□□ -0.75
CAPNS1-203ENST00000586963 ZNF408Q9H9D4 720 aa10.39□□□□□ -0.75
CAPNS1-203ENST00000586963 LRRC37AA6NMS7 1700 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms