RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 LRRFIP2Q9Y608 721 aaKnown RBP22.82■■□□□ 1.24
RETREG3-205ENST00000586870 ALDH1L1O75891 902 aa22.81■■□□□ 1.24
RETREG3-205ENST00000586870 PIM2Q9P1W9 311 aa22.81■■□□□ 1.24
RETREG3-205ENST00000586870 NTSR2O95665 410 aa22.8■■□□□ 1.24
RETREG3-205ENST00000586870 ZNF622Q969S3 477 aaKnown RBP eCLIP22.8■■□□□ 1.24
RETREG3-205ENST00000586870 TRIM28Q13263 835 aaKnown RBP22.79■■□□□ 1.24
RETREG3-205ENST00000586870 SH3TC1Q8TE82 1336 aa22.79■■□□□ 1.24
RETREG3-205ENST00000586870 EIF5BO60841 1220 aaKnown RBP22.79■■□□□ 1.24
RETREG3-205ENST00000586870 CCDC191Q8NCU4 936 aa22.79■■□□□ 1.24
RETREG3-205ENST00000586870 CWC25Q9NXE8 425 aaPredicted RBP22.79■■□□□ 1.24
RETREG3-205ENST00000586870 HDAC5Q9UQL6 1122 aa22.79■■□□□ 1.24
RETREG3-205ENST00000586870 IBTKQ9P2D0 1353 aaPredicted RBP22.78■■□□□ 1.24
RETREG3-205ENST00000586870 TTC22Q5TAA0 569 aa22.78■■□□□ 1.24
RETREG3-205ENST00000586870 BCS1LQ9Y276 419 aa22.78■■□□□ 1.24
RETREG3-205ENST00000586870 PNMA6EA0A0J9YXQ4 647 aa22.77■■□□□ 1.24
RETREG3-205ENST00000586870 MFAP1P55081 439 aaKnown RBP22.77■■□□□ 1.24
RETREG3-205ENST00000586870 RTL5Q5HYW3 569 aaPredicted RBP22.77■■□□□ 1.24
RETREG3-205ENST00000586870 C16orf71Q8IYS4 520 aaPredicted RBP22.77■■□□□ 1.24
RETREG3-205ENST00000586870 SSH3Q8TE77 659 aa22.77■■□□□ 1.24
RETREG3-205ENST00000586870 NLRP3Q96P20 1036 aa22.77■■□□□ 1.24
RETREG3-205ENST00000586870 C22orf23Q9BZE7 217 aa22.77■■□□□ 1.24
RETREG3-205ENST00000586870 DALRD3Q5D0E6 543 aaKnown RBP22.76■■□□□ 1.23
RETREG3-205ENST00000586870 FAM89AQ96GI7 184 aa22.76■■□□□ 1.23
RETREG3-205ENST00000586870 NUP98P52948 1817 aa22.75■■□□□ 1.23
RETREG3-205ENST00000586870 SMARCA5O60264 1052 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-205ENST00000586870 BECN1Q14457 450 aa22.75■■□□□ 1.23
RETREG3-205ENST00000586870 CDC45O75419 566 aa22.75■■□□□ 1.23
RETREG3-205ENST00000586870 HSP90B1P14625 803 aaKnown RBP22.75■■□□□ 1.23
RETREG3-205ENST00000586870 KCNA3P22001 575 aa22.75■■□□□ 1.23
RETREG3-205ENST00000586870 CWF19L2Q2TBE0 894 aaKnown RBP22.75■■□□□ 1.23
RETREG3-205ENST00000586870 MASTLQ96GX5 879 aa22.75■■□□□ 1.23
RETREG3-205ENST00000586870 OSBPL3Q9H4L5 887 aa22.75■■□□□ 1.23
RETREG3-205ENST00000586870 APBB1O00213 710 aa22.74■■□□□ 1.23
RETREG3-205ENST00000586870 GRIN3BO60391 1043 aa22.74■■□□□ 1.23
RETREG3-205ENST00000586870 HCLS1P14317 486 aaPredicted RBP22.74■■□□□ 1.23
RETREG3-205ENST00000586870 GSPT1P15170 499 aaKnown RBP22.74■■□□□ 1.23
RETREG3-205ENST00000586870 POLA2Q14181 598 aa22.74■■□□□ 1.23
RETREG3-205ENST00000586870 SLC10A5Q5PT55 438 aa22.74■■□□□ 1.23
RETREG3-205ENST00000586870 TTLL6Q8N841 843 aa22.74■■□□□ 1.23
RETREG3-205ENST00000586870 ZBTB38Q8NAP3 1195 aaPredicted RBP22.74■■□□□ 1.23
RETREG3-205ENST00000586870 LINS1Q8NG48 757 aa22.74■■□□□ 1.23
RETREG3-205ENST00000586870 RPGRQ92834 1020 aaKnown RBP22.74■■□□□ 1.23
RETREG3-205ENST00000586870 LRRCC1Q9C099 1032 aa22.74■■□□□ 1.23
RETREG3-205ENST00000586870 EXOC6BQ9Y2D4 811 aa22.74■■□□□ 1.23
RETREG3-205ENST00000586870 NEURL1BA8MQ27 555 aa22.73■■□□□ 1.23
RETREG3-205ENST00000586870 IGKV5-2P06315 115 aa22.73■■□□□ 1.23
RETREG3-205ENST00000586870 NBPF7P0C2Y1 421 aaPredicted RBP22.73■■□□□ 1.23
RETREG3-205ENST00000586870 SRGNP10124 158 aa22.73■■□□□ 1.23
RETREG3-205ENST00000586870 NPR1P16066 1061 aa22.73■■□□□ 1.23
RETREG3-205ENST00000586870 SYNE4Q8N205 404 aa22.73■■□□□ 1.23
RETREG3-205ENST00000586870 CNKSR1Q969H4 720 aa22.73■■□□□ 1.23
RETREG3-205ENST00000586870 ABCC12Q96J65 1359 aa22.73■■□□□ 1.23
RETREG3-205ENST00000586870 NRXN2Q9P2S2 1712 aa22.73■■□□□ 1.23
RETREG3-205ENST00000586870 RAB11FIP3O75154 756 aa22.72■■□□□ 1.23
RETREG3-205ENST00000586870 STYK1Q6J9G0 422 aa22.72■■□□□ 1.23
RETREG3-205ENST00000586870 AFDNP55196 1824 aaKnown RBP22.72■■□□□ 1.23
RETREG3-205ENST00000586870 IRS4O14654 1257 aaPredicted RBP22.71■■□□□ 1.23
RETREG3-205ENST00000586870 YBX3P16989 372 aaKnown RBP eCLIP22.71■■□□□ 1.23
RETREG3-205ENST00000586870 TBC1D9Q6ZT07 1266 aa22.71■■□□□ 1.23
RETREG3-205ENST00000586870 OTUD7AQ8TE49 926 aaPredicted RBP22.71■■□□□ 1.23
RETREG3-205ENST00000586870 PCCAP05165 728 aaPredicted RBP22.71■■□□□ 1.23
RETREG3-205ENST00000586870 JARID2Q92833 1246 aaPredicted RBP22.71■■□□□ 1.23
RETREG3-205ENST00000586870 C9orf78Q9NZ63 289 aaPredicted RBP22.71■■□□□ 1.23
RETREG3-205ENST00000586870 KLRG2A4D1S0 409 aaPredicted RBP22.7■■□□□ 1.22
RETREG3-205ENST00000586870 ALDH1B1P30837 517 aa22.7■■□□□ 1.22
RETREG3-205ENST00000586870 SLC4A3P48751 1232 aa22.7■■□□□ 1.22
RETREG3-205ENST00000586870 RBM25P49756 843 aaKnown RBP22.7■■□□□ 1.22
RETREG3-205ENST00000586870 RBM17Q96I25 401 aaKnown RBP22.7■■□□□ 1.22
RETREG3-205ENST00000586870 MTX1Q13505 466 aa22.69■■□□□ 1.22
RETREG3-205ENST00000586870 GCKRQ14397 625 aa22.69■■□□□ 1.22
RETREG3-205ENST00000586870 UTYO14607 1347 aa22.69■■□□□ 1.22
RETREG3-205ENST00000586870 PDE1AP54750 535 aa22.68■■□□□ 1.22
RETREG3-205ENST00000586870 SALL3Q9BXA9 1300 aa22.68■■□□□ 1.22
RETREG3-205ENST00000586870 HSP90AB4PQ58FF6 505 aa22.68■■□□□ 1.22
RETREG3-205ENST00000586870 ZNF219Q9P2Y4 722 aaPredicted RBP22.68■■□□□ 1.22
RETREG3-205ENST00000586870 ARFGEF2Q9Y6D5 1785 aa22.67■■□□□ 1.22
RETREG3-205ENST00000586870 KIF13BQ9NQT8 1826 aa22.67■■□□□ 1.22
RETREG3-205ENST00000586870 SRGAP3O43295 1099 aa22.67■■□□□ 1.22
RETREG3-205ENST00000586870 CRY2Q49AN0 593 aa22.67■■□□□ 1.22
RETREG3-205ENST00000586870 ARHGAP27Q6ZUM4 889 aa22.67■■□□□ 1.22
RETREG3-205ENST00000586870 UBE3BQ7Z3V4 1068 aa22.67■■□□□ 1.22
RETREG3-205ENST00000586870 C3orf67Q6ZVT6 689 aa22.66■■□□□ 1.22
RETREG3-205ENST00000586870 DDX46Q7L014 1031 aaKnown RBP22.66■■□□□ 1.22
RETREG3-205ENST00000586870 GRM8O00222 908 aa22.65■■□□□ 1.22
RETREG3-205ENST00000586870 PDE8AO60658 829 aa22.65■■□□□ 1.22
RETREG3-205ENST00000586870 SURF6O75683 361 aaKnown RBP22.65■■□□□ 1.22
RETREG3-205ENST00000586870 SDSP20132 328 aa22.65■■□□□ 1.22
RETREG3-205ENST00000586870 BCL11AQ9H165 835 aa22.65■■□□□ 1.22
RETREG3-205ENST00000586870 STAP2Q9UGK3 403 aa22.65■■□□□ 1.22
RETREG3-205ENST00000586870 RIC1Q4ADV7 1423 aa22.65■■□□□ 1.22
RETREG3-205ENST00000586870 H7C1W4 665 aa22.64■■□□□ 1.22
RETREG3-205ENST00000586870 PRPF40BQ6NWY9 871 aaKnown RBP22.64■■□□□ 1.22
RETREG3-205ENST00000586870 CASC1Q6TDU7 716 aa22.64■■□□□ 1.22
RETREG3-205ENST00000586870 TMX4Q9H1E5 349 aaPredicted RBP22.64■■□□□ 1.22
RETREG3-205ENST00000586870 ANKRD36CQ5JPF3 1778 aa22.64■■□□□ 1.21
RETREG3-205ENST00000586870 C21orf2O43822 256 aa22.64■■□□□ 1.21
RETREG3-205ENST00000586870 HOXA10P31260 410 aaPredicted RBP22.64■■□□□ 1.21
RETREG3-205ENST00000586870 KIF1BPQ96EK5 621 aa22.64■■□□□ 1.21
RETREG3-205ENST00000586870 AOX1Q06278 1338 aa22.64■■□□□ 1.21
RETREG3-205ENST00000586870 CDHR2Q9BYE9 1310 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms