RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 CCDC152Q4G0S7 254 aa27.09■■□□□ 1.93
RETREG3-202ENST00000585726 OLFM4Q6UX06 510 aa27.09■■□□□ 1.93
RETREG3-202ENST00000585726 GOLGB1Q14789 3259 aaKnown RBP27.08■■□□□ 1.93
RETREG3-202ENST00000585726 PPEF1O14829 653 aaPredicted RBP27.08■■□□□ 1.93
RETREG3-202ENST00000585726 ARFGEF1Q9Y6D6 1849 aa27.07■■□□□ 1.92
RETREG3-202ENST00000585726 NBPF7P0C2Y1 421 aaPredicted RBP27.07■■□□□ 1.92
RETREG3-202ENST00000585726 SEC31BQ9NQW1 1179 aa27.07■■□□□ 1.92
RETREG3-202ENST00000585726 GRAPQ13588 217 aa27.06■■□□□ 1.92
RETREG3-202ENST00000585726 SLC51AQ86UW1 340 aa27.06■■□□□ 1.92
RETREG3-202ENST00000585726 TTLL11Q8NHH1 800 aa27.06■■□□□ 1.92
RETREG3-202ENST00000585726 GRAPLQ8TC17 118 aaPredicted RBP27.06■■□□□ 1.92
RETREG3-202ENST00000585726 RASSF7Q02833 373 aa27.05■■□□□ 1.92
RETREG3-202ENST00000585726 C7orf43Q8WVR3 580 aa27.05■■□□□ 1.92
RETREG3-202ENST00000585726 CELF1Q92879 486 aaKnown RBP27.05■■□□□ 1.92
RETREG3-202ENST00000585726 PLA2G12BQ9BX93 195 aa27.05■■□□□ 1.92
RETREG3-202ENST00000585726 SUCLG2Q96I99 432 aa27.04■■□□□ 1.92
RETREG3-202ENST00000585726 USP44Q9H0E7 712 aa27.04■■□□□ 1.92
RETREG3-202ENST00000585726 BBOX1O75936 387 aa27.03■■□□□ 1.92
RETREG3-202ENST00000585726 CCDC93Q567U6 631 aa27.03■■□□□ 1.92
RETREG3-202ENST00000585726 SOGA3Q5TF21 947 aa27.03■■□□□ 1.92
RETREG3-202ENST00000585726 GREM2Q9H772 168 aa27.03■■□□□ 1.92
RETREG3-202ENST00000585726 CHMP3Q9Y3E7 222 aa27.03■■□□□ 1.92
RETREG3-202ENST00000585726 UTYO14607 1347 aa27.02■■□□□ 1.92
RETREG3-202ENST00000585726 FOXO4P98177 505 aa27.02■■□□□ 1.92
RETREG3-202ENST00000585726 EPHA10Q5JZY3 1008 aa27.02■■□□□ 1.92
RETREG3-202ENST00000585726 INTS3Q68E01 1043 aaKnown RBP27.02■■□□□ 1.92
RETREG3-202ENST00000585726 FTSJ3Q8IY81 847 aaKnown RBP27.02■■□□□ 1.92
RETREG3-202ENST00000585726 TMX4Q9H1E5 349 aaPredicted RBP27.02■■□□□ 1.92
RETREG3-202ENST00000585726 TAF1P21675 1872 aa27■■□□□ 1.91
RETREG3-202ENST00000585726 NFKBIEO00221 500 aa27■■□□□ 1.91
RETREG3-202ENST00000585726 PLIN1O60240 522 aa27■■□□□ 1.91
RETREG3-202ENST00000585726 RPS8P62241 208 aaKnown RBP27■■□□□ 1.91
RETREG3-202ENST00000585726 FAM161AQ3B820 660 aa27■■□□□ 1.91
RETREG3-202ENST00000585726 LMBR1LQ6UX01 489 aa27■■□□□ 1.91
RETREG3-202ENST00000585726 DZIP1LQ8IYY4 767 aaKnown RBP27■■□□□ 1.91
RETREG3-202ENST00000585726 TMEM57Q8N5G2 664 aa27■■□□□ 1.91
RETREG3-202ENST00000585726 ATP6V0A2Q9Y487 856 aa27■■□□□ 1.91
RETREG3-202ENST00000585726 CSF1RP07333 972 aa26.99■■□□□ 1.91
RETREG3-202ENST00000585726 COL4A1P02462 1669 aa26.98■■□□□ 1.91
RETREG3-202ENST00000585726 ITGA6P23229 1130 aa26.98■■□□□ 1.91
RETREG3-202ENST00000585726 ANKRD18AQ8IVF6 992 aa26.98■■□□□ 1.91
RETREG3-202ENST00000585726 RTKN2Q8IZC4 609 aa26.98■■□□□ 1.91
RETREG3-202ENST00000585726 KAZALD1Q96I82 304 aa26.98■■□□□ 1.91
RETREG3-202ENST00000585726 CDC5LQ99459 802 aaKnown RBP26.98■■□□□ 1.91
RETREG3-202ENST00000585726 TAOK3Q9H2K8 898 aa26.98■■□□□ 1.91
RETREG3-202ENST00000585726 UBTFL1P0CB47 393 aaPredicted RBP26.97■■□□□ 1.91
RETREG3-202ENST00000585726 CC2D2BQ6DHV5 1058 aa26.97■■□□□ 1.91
RETREG3-202ENST00000585726 SP8Q8IXZ3 490 aa26.97■■□□□ 1.91
RETREG3-202ENST00000585726 MEIS3Q99687 375 aa26.97■■□□□ 1.91
RETREG3-202ENST00000585726 BICC1Q9H694 974 aaKnown RBP26.97■■□□□ 1.91
RETREG3-202ENST00000585726 UTRNP46939 3433 aa26.96■■□□□ 1.91
RETREG3-202ENST00000585726 RLBP1P12271 317 aa26.96■■□□□ 1.91
RETREG3-202ENST00000585726 C9orf131Q5VYM1 1079 aa26.96■■□□□ 1.91
RETREG3-202ENST00000585726 PANK1Q8TE04 598 aa26.96■■□□□ 1.91
RETREG3-202ENST00000585726 MYH3P11055 1940 aa26.96■■□□□ 1.91
RETREG3-202ENST00000585726 ANKRD18BA2A2Z9 1011 aa26.95■■□□□ 1.9
RETREG3-202ENST00000585726 YY1P25490 414 aa26.95■■□□□ 1.9
RETREG3-202ENST00000585726 TMC4Q7Z404 712 aa26.95■■□□□ 1.9
RETREG3-202ENST00000585726 RNF181Q9P0P0 153 aa26.95■■□□□ 1.9
RETREG3-202ENST00000585726 RTL9Q8NET4 1388 aa26.95■■□□□ 1.9
RETREG3-202ENST00000585726 PRELPP51888 382 aa26.94■■□□□ 1.9
RETREG3-202ENST00000585726 FKBP4Q02790 459 aaKnown RBP eCLIP26.94■■□□□ 1.9
RETREG3-202ENST00000585726 IFIT5Q13325 482 aaKnown RBP26.94■■□□□ 1.9
RETREG3-202ENST00000585726 ITPRIPQ8IWB1 547 aa26.94■■□□□ 1.9
RETREG3-202ENST00000585726 IGHMBP2P38935 993 aaKnown RBP26.93■■□□□ 1.9
RETREG3-202ENST00000585726 CCDC57Q2TAC2 916 aa26.93■■□□□ 1.9
RETREG3-202ENST00000585726 LMNB1P20700 586 aa26.92■■□□□ 1.9
RETREG3-202ENST00000585726 TAF7LQ5H9L4 462 aa26.92■■□□□ 1.9
RETREG3-202ENST00000585726 DPP8Q6V1X1 898 aaPredicted RBP26.92■■□□□ 1.9
RETREG3-202ENST00000585726 MPNDQ8N594 471 aa26.92■■□□□ 1.9
RETREG3-202ENST00000585726 ANKRD44Q8N8A2 993 aa26.92■■□□□ 1.9
RETREG3-202ENST00000585726 ZNF277Q9NRM2 450 aaPredicted RBP26.92■■□□□ 1.9
RETREG3-202ENST00000585726 LRRFIP2Q9Y608 721 aaKnown RBP26.92■■□□□ 1.9
RETREG3-202ENST00000585726 GNAI3P08754 354 aa26.91■■□□□ 1.9
RETREG3-202ENST00000585726 MS4A1P11836 297 aa26.91■■□□□ 1.9
RETREG3-202ENST00000585726 GRIPAP1Q4V328 841 aa26.91■■□□□ 1.9
RETREG3-202ENST00000585726 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.91■■□□□ 1.9
RETREG3-202ENST00000585726 MPHOSPH8Q99549 860 aa26.91■■□□□ 1.9
RETREG3-202ENST00000585726 NSFL1CQ9UNZ2 370 aaKnown RBP26.91■■□□□ 1.9
RETREG3-202ENST00000585726 FER1L6Q2WGJ9 1857 aa26.91■■□□□ 1.9
RETREG3-202ENST00000585726 LTBP3Q9NS15 1303 aa26.9■■□□□ 1.9
RETREG3-202ENST00000585726 CHD4Q14839 1912 aa26.9■■□□□ 1.9
RETREG3-202ENST00000585726 GPSM2P81274 684 aa26.9■■□□□ 1.9
RETREG3-202ENST00000585726 ZNF594Q96JF6 807 aaPredicted RBP26.9■■□□□ 1.9
RETREG3-202ENST00000585726 RABL6Q3YEC7 729 aaPredicted RBP26.89■■□□□ 1.9
RETREG3-202ENST00000585726 PSMD1Q99460 953 aa26.89■■□□□ 1.9
RETREG3-202ENST00000585726 BSDC1Q9NW68 430 aaPredicted RBP26.89■■□□□ 1.9
RETREG3-202ENST00000585726 HDAC5Q9UQL6 1122 aa26.89■■□□□ 1.9
RETREG3-202ENST00000585726 SNED1Q8TER0 1413 aa26.89■■□□□ 1.89
RETREG3-202ENST00000585726 ANKIB1Q9P2G1 1089 aa26.88■■□□□ 1.89
RETREG3-202ENST00000585726 IARSP41252 1262 aaKnown RBP26.86■■□□□ 1.89
RETREG3-202ENST00000585726 MINPP1Q9UNW1 487 aa26.86■■□□□ 1.89
RETREG3-202ENST00000585726 COG6Q9Y2V7 657 aa26.86■■□□□ 1.89
RETREG3-202ENST00000585726 SPEF2Q9C093 1822 aa26.86■■□□□ 1.89
RETREG3-202ENST00000585726 C6orf229H3BNL8 230 aa26.85■■□□□ 1.89
RETREG3-202ENST00000585726 GNAI2P04899 355 aa26.85■■□□□ 1.89
RETREG3-202ENST00000585726 C20orf194Q5TEA3 1177 aa26.85■■□□□ 1.89
RETREG3-202ENST00000585726 SUPT20HQ8NEM7 779 aa26.85■■□□□ 1.89
RETREG3-202ENST00000585726 LDHAL6AQ6ZMR3 332 aa26.84■■□□□ 1.89
RETREG3-202ENST00000585726 CNNM1Q9NRU3 951 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms