RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 DPP8Q6V1X1 898 aaPredicted RBP18.95■□□□□ 0.62
SDF2-202ENST00000585428 TRMT112Q9UI30 125 aaKnown RBP18.95■□□□□ 0.62
SDF2-202ENST00000585428 GRAPQ13588 217 aa18.94■□□□□ 0.62
SDF2-202ENST00000585428 DDX46Q7L014 1031 aaKnown RBP18.94■□□□□ 0.62
SDF2-202ENST00000585428 GRAPLQ8TC17 118 aaPredicted RBP18.94■□□□□ 0.62
SDF2-202ENST00000585428 SH3TC1Q8TE82 1336 aa18.94■□□□□ 0.62
SDF2-202ENST00000585428 HSPA8P11142 646 aaKnown RBP18.93■□□□□ 0.62
SDF2-202ENST00000585428 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
SDF2-202ENST00000585428 TLL2Q9Y6L7 1015 aa18.93■□□□□ 0.62
SDF2-202ENST00000585428 GMPSP49915 693 aaPredicted RBP18.92■□□□□ 0.62
SDF2-202ENST00000585428 HIRAP54198 1017 aaPredicted RBP18.92■□□□□ 0.62
SDF2-202ENST00000585428 TNIP1Q15025 636 aa18.92■□□□□ 0.62
SDF2-202ENST00000585428 CIAPIN1Q6FI81 312 aa18.92■□□□□ 0.62
SDF2-202ENST00000585428 ANKRD13DQ6ZTN6 518 aa18.92■□□□□ 0.62
SDF2-202ENST00000585428 CCDC146Q8IYE0 955 aa18.92■□□□□ 0.62
SDF2-202ENST00000585428 PLBD2Q8NHP8 589 aa18.92■□□□□ 0.62
SDF2-202ENST00000585428 RUNDC1Q96C34 613 aa18.92■□□□□ 0.62
SDF2-202ENST00000585428 CAPNS2Q96L46 248 aa18.92■□□□□ 0.62
SDF2-202ENST00000585428 GPR101Q96P66 508 aaPredicted RBP18.92■□□□□ 0.62
SDF2-202ENST00000585428 ECE1P42892 770 aa18.91■□□□□ 0.62
SDF2-202ENST00000585428 MAPK8IP2Q13387 824 aaPredicted RBP18.91■□□□□ 0.62
SDF2-202ENST00000585428 CYP4F22Q6NT55 531 aa18.91■□□□□ 0.62
SDF2-202ENST00000585428 TMC4Q7Z404 712 aa18.91■□□□□ 0.62
SDF2-202ENST00000585428 ZC3H15Q8WU90 426 aaKnown RBP18.91■□□□□ 0.62
SDF2-202ENST00000585428 ISCA1Q9BUE6 129 aa18.91■□□□□ 0.62
SDF2-202ENST00000585428 CHPF2Q9P2E5 772 aa18.91■□□□□ 0.62
SDF2-202ENST00000585428 YDJCA8MPS7 323 aa18.9■□□□□ 0.62
SDF2-202ENST00000585428 RAD17O75943 681 aa18.9■□□□□ 0.62
SDF2-202ENST00000585428 HOXB7P09629 217 aa18.9■□□□□ 0.62
SDF2-202ENST00000585428 SF3B3Q15393 1217 aaKnown RBP18.9■□□□□ 0.62
SDF2-202ENST00000585428 LAS1LQ9Y4W2 734 aaKnown RBP18.9■□□□□ 0.62
SDF2-202ENST00000585428 MAP2K2P36507 400 aa18.89■□□□□ 0.61
SDF2-202ENST00000585428 SAPCD2Q86UD0 394 aa18.89■□□□□ 0.61
SDF2-202ENST00000585428 FAM89AQ96GI7 184 aa18.89■□□□□ 0.61
SDF2-202ENST00000585428 DBF4Q9UBU7 674 aaPredicted RBP18.89■□□□□ 0.61
SDF2-202ENST00000585428 CNOT7Q9UIV1 285 aaKnown RBP18.89■□□□□ 0.61
SDF2-202ENST00000585428 ADAMTS8Q9UP79 889 aa18.89■□□□□ 0.61
SDF2-202ENST00000585428 MYBBP1AQ9BQG0 1328 aaKnown RBP18.89■□□□□ 0.61
SDF2-202ENST00000585428 CDHR2Q9BYE9 1310 aa18.89■□□□□ 0.61
SDF2-202ENST00000585428 DDX10Q13206 875 aaKnown RBP18.88■□□□□ 0.61
SDF2-202ENST00000585428 TRIM28Q13263 835 aaKnown RBP18.88■□□□□ 0.61
SDF2-202ENST00000585428 HDGFL1Q5TGJ6 251 aa18.88■□□□□ 0.61
SDF2-202ENST00000585428 ZNF428Q96B54 188 aa18.88■□□□□ 0.61
SDF2-202ENST00000585428 HHIPL1Q96JK4 782 aa18.88■□□□□ 0.61
SDF2-202ENST00000585428 CFAP44Q96MT7 982 aa18.88■□□□□ 0.61
SDF2-202ENST00000585428 CELF2O95319 508 aaKnown RBP18.87■□□□□ 0.61
SDF2-202ENST00000585428 BCL2L13Q9BXK5 485 aa18.87■□□□□ 0.61
SDF2-202ENST00000585428 GLIS2Q9BZE0 524 aaPredicted RBP18.87■□□□□ 0.61
SDF2-202ENST00000585428 ATP5J2-PTCD1G3V325 749 aa18.86■□□□□ 0.61
SDF2-202ENST00000585428 WASHC4Q2M389 1173 aa18.86■□□□□ 0.61
SDF2-202ENST00000585428 CDC37L1Q7L3B6 337 aa18.86■□□□□ 0.61
SDF2-202ENST00000585428 DPF2Q92785 391 aa18.86■□□□□ 0.61
SDF2-202ENST00000585428 CELF1Q92879 486 aaKnown RBP18.86■□□□□ 0.61
SDF2-202ENST00000585428 HYPKQ9NX55 129 aa18.86■□□□□ 0.61
SDF2-202ENST00000585428 SHTN1A0MZ66 631 aa18.85■□□□□ 0.61
SDF2-202ENST00000585428 AOC2O75106 756 aa18.85■□□□□ 0.61
SDF2-202ENST00000585428 NPM3O75607 178 aaKnown RBP18.85■□□□□ 0.61
SDF2-202ENST00000585428 DUSP27Q5VZP5 1158 aa18.85■□□□□ 0.61
SDF2-202ENST00000585428 PAXIP1Q6ZW49 1069 aaPredicted RBP18.85■□□□□ 0.61
SDF2-202ENST00000585428 TRPM4Q8TD43 1214 aa18.85■□□□□ 0.61
SDF2-202ENST00000585428 POLLQ9UGP5 575 aa18.85■□□□□ 0.61
SDF2-202ENST00000585428 NSFL1CQ9UNZ2 370 aaKnown RBP18.85■□□□□ 0.61
SDF2-202ENST00000585428 H7C1D1 291 aa18.84■□□□□ 0.61
SDF2-202ENST00000585428 ZNF853P0CG23 659 aa18.84■□□□□ 0.61
SDF2-202ENST00000585428 GRM1Q13255 1194 aa18.84■□□□□ 0.61
SDF2-202ENST00000585428 ABHD8Q96I13 439 aa18.84■□□□□ 0.61
SDF2-202ENST00000585428 BEGAINQ9BUH8 593 aa18.84■□□□□ 0.61
SDF2-202ENST00000585428 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
SDF2-202ENST00000585428 PSMD14O00487 310 aa18.83■□□□□ 0.6
SDF2-202ENST00000585428 RPS8P62241 208 aaKnown RBP18.83■□□□□ 0.6
SDF2-202ENST00000585428 GPSM2P81274 684 aa18.83■□□□□ 0.6
SDF2-202ENST00000585428 WDR43Q15061 677 aaKnown RBP eCLIP18.83■□□□□ 0.6
SDF2-202ENST00000585428 MICALL2Q8IY33 904 aa18.83■□□□□ 0.6
SDF2-202ENST00000585428 KCNQ5Q9NR82 932 aa18.83■□□□□ 0.6
SDF2-202ENST00000585428 MBIPQ9NS73 344 aa18.83■□□□□ 0.6
SDF2-202ENST00000585428 ANKRD36CQ5JPF3 1778 aa18.83■□□□□ 0.6
SDF2-202ENST00000585428 IRS4O14654 1257 aaPredicted RBP18.82■□□□□ 0.6
SDF2-202ENST00000585428 RTL5Q5HYW3 569 aaPredicted RBP18.81■□□□□ 0.6
SDF2-202ENST00000585428 SAMD7Q7Z3H4 446 aa18.81■□□□□ 0.6
SDF2-202ENST00000585428 USP48Q86UV5 1035 aa18.81■□□□□ 0.6
SDF2-202ENST00000585428 DBNDD1Q9H9R9 158 aa18.81■□□□□ 0.6
SDF2-202ENST00000585428 C6orf229H3BNL8 230 aa18.8■□□□□ 0.6
SDF2-202ENST00000585428 RIMBP2O15034 1052 aa18.8■□□□□ 0.6
SDF2-202ENST00000585428 DLK2Q6UY11 383 aa18.8■□□□□ 0.6
SDF2-202ENST00000585428 ZBTB38Q8NAP3 1195 aaPredicted RBP18.8■□□□□ 0.6
SDF2-202ENST00000585428 TBC1D16Q8TBP0 767 aa18.8■□□□□ 0.6
SDF2-202ENST00000585428 PODXL2Q9NZ53 605 aa18.8■□□□□ 0.6
SDF2-202ENST00000585428 DUOX1Q9NRD9 1551 aa18.8■□□□□ 0.6
SDF2-202ENST00000585428 LAMB2P55268 1798 aa18.79■□□□□ 0.6
SDF2-202ENST00000585428 CA12O43570 354 aa18.79■□□□□ 0.6
SDF2-202ENST00000585428 EGFRP00533 1210 aa18.79■□□□□ 0.6
SDF2-202ENST00000585428 RPS12P25398 132 aaKnown RBP18.79■□□□□ 0.6
SDF2-202ENST00000585428 BRPF1P55201 1214 aaPredicted RBP18.79■□□□□ 0.6
SDF2-202ENST00000585428 RIC3Q7Z5B4 369 aa18.79■□□□□ 0.6
SDF2-202ENST00000585428 EYA3Q99504 573 aa18.79■□□□□ 0.6
SDF2-202ENST00000585428 PHAXQ9H814 394 aaKnown RBP18.79■□□□□ 0.6
SDF2-202ENST00000585428 VIL1P09327 827 aaKnown RBP18.78■□□□□ 0.6
SDF2-202ENST00000585428 DOK7Q18PE1 504 aa18.78■□□□□ 0.6
SDF2-202ENST00000585428 ZNF408Q9H9D4 720 aa18.78■□□□□ 0.6
SDF2-202ENST00000585428 TSKSQ9UJT2 592 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms