RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 FZD9O00144 591 aa21.44■■□□□ 1.02
CSNK1D-225ENST00000584913 ZNF428Q96B54 188 aa21.44■■□□□ 1.02
CSNK1D-225ENST00000584913 L3MBTL3Q96JM7 780 aaPredicted RBP21.44■■□□□ 1.02
CSNK1D-225ENST00000584913 SENP3-EIF4A1A0A087X0R7 540 aa21.43■■□□□ 1.02
CSNK1D-225ENST00000584913 PDE8AO60658 829 aa21.43■■□□□ 1.02
CSNK1D-225ENST00000584913 IGKV5-2P06315 115 aa21.43■■□□□ 1.02
CSNK1D-225ENST00000584913 OLFM4Q6UX06 510 aa21.43■■□□□ 1.02
CSNK1D-225ENST00000584913 JDP2Q8WYK2 163 aa21.43■■□□□ 1.02
CSNK1D-225ENST00000584913 ZNF277Q9NRM2 450 aaPredicted RBP21.43■■□□□ 1.02
CSNK1D-225ENST00000584913 HSPA6P17066 643 aa21.42■■□□□ 1.02
CSNK1D-225ENST00000584913 SCN4AP35499 1836 aa21.42■■□□□ 1.02
CSNK1D-225ENST00000584913 RRAGCQ9HB90 399 aa21.42■■□□□ 1.02
CSNK1D-225ENST00000584913 RTL9Q8NET4 1388 aa21.41■■□□□ 1.02
CSNK1D-225ENST00000584913 NEURL1BA8MQ27 555 aa21.41■■□□□ 1.02
CSNK1D-225ENST00000584913 FKBP5Q13451 457 aaPredicted RBP21.41■■□□□ 1.02
CSNK1D-225ENST00000584913 CCDC152Q4G0S7 254 aa21.41■■□□□ 1.02
CSNK1D-225ENST00000584913 G2E3Q7L622 706 aa21.41■■□□□ 1.02
CSNK1D-225ENST00000584913 LINS1Q8NG48 757 aa21.41■■□□□ 1.02
CSNK1D-225ENST00000584913 DNAAF4Q8WXU2 420 aa21.41■■□□□ 1.02
CSNK1D-225ENST00000584913 IQCA1LA6NCM1 817 aa21.4■■□□□ 1.02
CSNK1D-225ENST00000584913 LTBP1Q14766 1721 aa21.39■■□□□ 1.01
CSNK1D-225ENST00000584913 DPP8Q6V1X1 898 aaPredicted RBP21.39■■□□□ 1.01
CSNK1D-225ENST00000584913 SMC1BQ8NDV3 1235 aa21.39■■□□□ 1.01
CSNK1D-225ENST00000584913 DUOX1Q9NRD9 1551 aa21.39■■□□□ 1.01
CSNK1D-225ENST00000584913 MYH3P11055 1940 aa21.38■■□□□ 1.01
CSNK1D-225ENST00000584913 POTECB2RU33 542 aa21.38■■□□□ 1.01
CSNK1D-225ENST00000584913 GPC2Q8N158 579 aa21.38■■□□□ 1.01
CSNK1D-225ENST00000584913 MPNDQ8N594 471 aa21.38■■□□□ 1.01
CSNK1D-225ENST00000584913 PLA2G12BQ9BX93 195 aa21.38■■□□□ 1.01
CSNK1D-225ENST00000584913 CT47B1P0C2W7 299 aaPredicted RBP21.37■■□□□ 1.01
CSNK1D-225ENST00000584913 SLFN5Q08AF3 891 aa21.37■■□□□ 1.01
CSNK1D-225ENST00000584913 GCKRQ14397 625 aa21.37■■□□□ 1.01
CSNK1D-225ENST00000584913 LARGE2Q8N3Y3 721 aa21.37■■□□□ 1.01
CSNK1D-225ENST00000584913 COL4A5P29400 1685 aa21.37■■□□□ 1.01
CSNK1D-225ENST00000584913 H7C1W4 665 aa21.36■■□□□ 1.01
CSNK1D-225ENST00000584913 TCERG1O14776 1098 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-225ENST00000584913 CTSWP56202 376 aa21.36■■□□□ 1.01
CSNK1D-225ENST00000584913 RPS8P62241 208 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-225ENST00000584913 KIAA2012Q0VF49 1180 aa21.36■■□□□ 1.01
CSNK1D-225ENST00000584913 CELF1Q92879 486 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-225ENST00000584913 ZNF541Q9H0D2 1346 aa21.35■■□□□ 1.01
CSNK1D-225ENST00000584913 DDNO94850 711 aaPredicted RBP21.35■■□□□ 1.01
CSNK1D-225ENST00000584913 EIF6P56537 245 aaKnown RBP21.35■■□□□ 1.01
CSNK1D-225ENST00000584913 RTL5Q5HYW3 569 aaPredicted RBP21.35■■□□□ 1.01
CSNK1D-225ENST00000584913 NIM1KQ8IY84 436 aa21.35■■□□□ 1.01
CSNK1D-225ENST00000584913 TRMT2AQ8IZ69 625 aaKnown RBP21.35■■□□□ 1.01
CSNK1D-225ENST00000584913 PODXL2Q9NZ53 605 aa21.35■■□□□ 1.01
CSNK1D-225ENST00000584913 PPIP5K2O43314 1243 aa21.34■■□□□ 1.01
CSNK1D-225ENST00000584913 APLP1P51693 650 aa21.34■■□□□ 1.01
CSNK1D-225ENST00000584913 CWF19L2Q2TBE0 894 aaKnown RBP21.34■■□□□ 1.01
CSNK1D-225ENST00000584913 CDC5LQ99459 802 aaKnown RBP21.34■■□□□ 1.01
CSNK1D-225ENST00000584913 TAF1P21675 1872 aa21.32■■□□□ 1
CSNK1D-225ENST00000584913 PTPRCP08575 1304 aa21.32■■□□□ 1
CSNK1D-225ENST00000584913 CASP7P55210 303 aa21.32■■□□□ 1
CSNK1D-225ENST00000584913 ALDH1L2Q3SY69 923 aa21.32■■□□□ 1
CSNK1D-225ENST00000584913 BEND3Q5T5X7 828 aa21.32■■□□□ 1
CSNK1D-225ENST00000584913 TTLL11Q8NHH1 800 aa21.32■■□□□ 1
CSNK1D-225ENST00000584913 EYA3Q99504 573 aa21.32■■□□□ 1
CSNK1D-225ENST00000584913 ZNRF3Q9ULT6 936 aa21.32■■□□□ 1
CSNK1D-225ENST00000584913 COL4A1P02462 1669 aa21.31■■□□□ 1
CSNK1D-225ENST00000584913 ADAMTSL1Q8N6G6 1762 aa21.31■■□□□ 1
CSNK1D-225ENST00000584913 AOC3Q16853 763 aa21.31■■□□□ 1
CSNK1D-225ENST00000584913 PNMA8AQ86V59 439 aaPredicted RBP21.31■■□□□ 1
CSNK1D-225ENST00000584913 HACL1Q9UJ83 578 aa21.31■■□□□ 1
CSNK1D-225ENST00000584913 ALDH1L1O75891 902 aa21.3■■□□□ 1
CSNK1D-225ENST00000584913 UBE3BQ7Z3V4 1068 aa21.3■■□□□ 1
CSNK1D-225ENST00000584913 ANKRD18AQ8IVF6 992 aa21.3■■□□□ 1
CSNK1D-225ENST00000584913 TAF1DQ9H5J8 278 aaPredicted RBP21.3■■□□□ 1
CSNK1D-225ENST00000584913 CSF1RP07333 972 aa21.29■■□□□ 1
CSNK1D-225ENST00000584913 SLC51AQ86UW1 340 aa21.29■■□□□ 1
CSNK1D-225ENST00000584913 LDHDQ86WU2 507 aa21.29■■□□□ 1
CSNK1D-225ENST00000584913 SEC31BQ9NQW1 1179 aa21.29■■□□□ 1
CSNK1D-225ENST00000584913 MRPL50Q8N5N7 158 aaKnown RBP21.28■■□□□ 1
CSNK1D-225ENST00000584913 BSDC1Q9NW68 430 aaPredicted RBP21.28■■□□□ 1
CSNK1D-225ENST00000584913 NSFL1CQ9UNZ2 370 aaKnown RBP21.28■■□□□ 1
CSNK1D-225ENST00000584913 XDHP47989 1333 aa21.28■■□□□ 1
CSNK1D-225ENST00000584913 WASHC4Q2M389 1173 aa21.27■■□□□ 1
CSNK1D-225ENST00000584913 CHADLQ6NUI6 762 aa21.27■■□□□ 1
CSNK1D-225ENST00000584913 LMOD1P29536 600 aaPredicted RBP21.26■□□□□ 0.99
CSNK1D-225ENST00000584913 EPHX2P34913 555 aa21.26■□□□□ 0.99
CSNK1D-225ENST00000584913 BRPF1P55201 1214 aaPredicted RBP21.26■□□□□ 0.99
CSNK1D-225ENST00000584913 GPSM2P81274 684 aa21.26■□□□□ 0.99
CSNK1D-225ENST00000584913 TNIP1Q15025 636 aa21.26■□□□□ 0.99
CSNK1D-225ENST00000584913 TBC1D16Q8TBP0 767 aa21.26■□□□□ 0.99
CSNK1D-225ENST00000584913 SRCIN1Q9C0H9 1055 aa21.26■□□□□ 0.99
CSNK1D-225ENST00000584913 ZNF609O15014 1411 aa21.26■□□□□ 0.99
CSNK1D-225ENST00000584913 F6X3S4 739 aa21.25■□□□□ 0.99
CSNK1D-225ENST00000584913 GRM8O00222 908 aa21.25■□□□□ 0.99
CSNK1D-225ENST00000584913 MIER1Q8N108 512 aa21.25■□□□□ 0.99
CSNK1D-225ENST00000584913 GREM2Q9H772 168 aa21.25■□□□□ 0.99
CSNK1D-225ENST00000584913 POLLQ9UGP5 575 aa21.25■□□□□ 0.99
CSNK1D-225ENST00000584913 GGA1Q9UJY5 639 aa21.25■□□□□ 0.99
CSNK1D-225ENST00000584913 SCNN1DP51172 638 aa21.24■□□□□ 0.99
CSNK1D-225ENST00000584913 CXCL9Q07325 125 aa21.24■□□□□ 0.99
CSNK1D-225ENST00000584913 CIAPIN1Q6FI81 312 aa21.24■□□□□ 0.99
CSNK1D-225ENST00000584913 JARID2Q92833 1246 aaPredicted RBP21.24■□□□□ 0.99
CSNK1D-225ENST00000584913 UTYO14607 1347 aa21.24■□□□□ 0.99
CSNK1D-225ENST00000584913 C6orf229H3BNL8 230 aa21.23■□□□□ 0.99
CSNK1D-225ENST00000584913 ATP2B4P23634 1241 aa21.23■□□□□ 0.99
CSNK1D-225ENST00000584913 IGHMBP2P38935 993 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms