RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 HSPA1BP0DMV9 641 aaKnown RBP26.42■■□□□ 1.82
TOP3A-219ENST00000584887 EPS15P42566 896 aa26.42■■□□□ 1.82
TOP3A-219ENST00000584887 CNTROBQ8N137 903 aa26.42■■□□□ 1.82
TOP3A-219ENST00000584887 C8orf58Q8NAV2 365 aa26.42■■□□□ 1.82
TOP3A-219ENST00000584887 RTFDC1Q9BY42 306 aaPredicted RBP26.42■■□□□ 1.82
TOP3A-219ENST00000584887 PHAXQ9H814 394 aaKnown RBP26.42■■□□□ 1.82
TOP3A-219ENST00000584887 SCNN1DP51172 638 aa26.41■■□□□ 1.82
TOP3A-219ENST00000584887 VPS33BQ9H267 617 aa26.41■■□□□ 1.82
TOP3A-219ENST00000584887 ZNRF3Q9ULT6 936 aa26.41■■□□□ 1.82
TOP3A-219ENST00000584887 DDX60Q8IY21 1712 aaKnown RBP26.41■■□□□ 1.82
TOP3A-219ENST00000584887 ADAMTSL1Q8N6G6 1762 aa26.41■■□□□ 1.82
TOP3A-219ENST00000584887 LTBP1Q14766 1721 aa26.4■■□□□ 1.82
TOP3A-219ENST00000584887 TMEM88BA6NKF7 163 aa26.4■■□□□ 1.82
TOP3A-219ENST00000584887 IRS4O14654 1257 aaPredicted RBP26.4■■□□□ 1.82
TOP3A-219ENST00000584887 TMC4Q7Z404 712 aa26.39■■□□□ 1.82
TOP3A-219ENST00000584887 MYD88Q99836 296 aa26.39■■□□□ 1.82
TOP3A-219ENST00000584887 CXCL9Q07325 125 aa26.38■■□□□ 1.81
TOP3A-219ENST00000584887 KIAA2012Q0VF49 1180 aa26.38■■□□□ 1.81
TOP3A-219ENST00000584887 COL13A1Q5TAT6 717 aaPredicted RBP26.38■■□□□ 1.81
TOP3A-219ENST00000584887 CELF1Q92879 486 aaKnown RBP26.38■■□□□ 1.81
TOP3A-219ENST00000584887 CNTNAP1P78357 1384 aa26.37■■□□□ 1.81
TOP3A-219ENST00000584887 TRIM28Q13263 835 aaKnown RBP26.37■■□□□ 1.81
TOP3A-219ENST00000584887 SF3B3Q15393 1217 aaKnown RBP26.37■■□□□ 1.81
TOP3A-219ENST00000584887 CCDC30Q5VVM6 783 aa26.37■■□□□ 1.81
TOP3A-219ENST00000584887 TSR2Q969E8 191 aaKnown RBP26.37■■□□□ 1.81
TOP3A-219ENST00000584887 RAD17O75943 681 aa26.36■■□□□ 1.81
TOP3A-219ENST00000584887 GMPSP49915 693 aaPredicted RBP26.35■■□□□ 1.81
TOP3A-219ENST00000584887 CIAPIN1Q6FI81 312 aa26.35■■□□□ 1.81
TOP3A-219ENST00000584887 TSPYL6Q8N831 410 aa26.35■■□□□ 1.81
TOP3A-219ENST00000584887 NSFL1CQ9UNZ2 370 aaKnown RBP26.35■■□□□ 1.81
TOP3A-219ENST00000584887 DDX58O95786 925 aaKnown RBP26.34■■□□□ 1.81
TOP3A-219ENST00000584887 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
TOP3A-219ENST00000584887 USP50Q70EL3 339 aaPredicted RBP26.34■■□□□ 1.81
TOP3A-219ENST00000584887 ZBTB38Q8NAP3 1195 aaPredicted RBP26.34■■□□□ 1.81
TOP3A-219ENST00000584887 BCL2L13Q9BXK5 485 aa26.34■■□□□ 1.81
TOP3A-219ENST00000584887 CHMP4AQ9BY43 222 aa26.34■■□□□ 1.81
TOP3A-219ENST00000584887 GPRC5DQ9NZD1 345 aa26.34■■□□□ 1.81
TOP3A-219ENST00000584887 JARID2Q92833 1246 aaPredicted RBP26.33■■□□□ 1.81
TOP3A-219ENST00000584887 MRS2Q9HD23 443 aa26.33■■□□□ 1.81
TOP3A-219ENST00000584887 DUOX1Q9NRD9 1551 aa26.33■■□□□ 1.8
TOP3A-219ENST00000584887 LRRC37AA6NMS7 1700 aa26.32■■□□□ 1.8
TOP3A-219ENST00000584887 C6orf229H3BNL8 230 aa26.32■■□□□ 1.8
TOP3A-219ENST00000584887 TNIP1Q15025 636 aa26.32■■□□□ 1.8
TOP3A-219ENST00000584887 ADARB2Q9NS39 739 aaKnown RBP26.32■■□□□ 1.8
TOP3A-219ENST00000584887 ABT1Q9ULW3 272 aaKnown RBP26.32■■□□□ 1.8
TOP3A-219ENST00000584887 RIMBP2O15034 1052 aa26.31■■□□□ 1.8
TOP3A-219ENST00000584887 HSP90B1P14625 803 aaKnown RBP26.31■■□□□ 1.8
TOP3A-219ENST00000584887 VEGFBP49765 207 aa26.31■■□□□ 1.8
TOP3A-219ENST00000584887 GPSM2P81274 684 aa26.31■■□□□ 1.8
TOP3A-219ENST00000584887 WASHC4Q2M389 1173 aa26.31■■□□□ 1.8
TOP3A-219ENST00000584887 CCDC191Q8NCU4 936 aa26.31■■□□□ 1.8
TOP3A-219ENST00000584887 CWC25Q9NXE8 425 aaPredicted RBP26.31■■□□□ 1.8
TOP3A-219ENST00000584887 COL4A1P02462 1669 aa26.31■■□□□ 1.8
TOP3A-219ENST00000584887 RPS8P62241 208 aaKnown RBP26.3■■□□□ 1.8
TOP3A-219ENST00000584887 FMR1Q06787 632 aaKnown RBP eCLIP26.3■■□□□ 1.8
TOP3A-219ENST00000584887 CCDC85AQ96PX6 553 aaPredicted RBP26.3■■□□□ 1.8
TOP3A-219ENST00000584887 METTL22Q9BUU2 404 aaPredicted RBP26.3■■□□□ 1.8
TOP3A-219ENST00000584887 STK31Q9BXU1 1019 aa26.3■■□□□ 1.8
TOP3A-219ENST00000584887 MAP3K2Q9Y2U5 619 aa26.3■■□□□ 1.8
TOP3A-219ENST00000584887 YDJCA8MPS7 323 aa26.29■■□□□ 1.8
TOP3A-219ENST00000584887 ANP32CO43423 234 aa26.29■■□□□ 1.8
TOP3A-219ENST00000584887 PCCAP05165 728 aaPredicted RBP26.29■■□□□ 1.8
TOP3A-219ENST00000584887 WWC1Q8IX03 1113 aa26.29■■□□□ 1.8
TOP3A-219ENST00000584887 TNS4Q8IZW8 715 aa26.29■■□□□ 1.8
TOP3A-219ENST00000584887 DBNDD1Q9H9R9 158 aa26.29■■□□□ 1.8
TOP3A-219ENST00000584887 SEC31BQ9NQW1 1179 aa26.29■■□□□ 1.8
TOP3A-219ENST00000584887 TRAF5O00463 557 aa26.28■■□□□ 1.8
TOP3A-219ENST00000584887 GPR101Q96P66 508 aaPredicted RBP26.28■■□□□ 1.8
TOP3A-219ENST00000584887 POLLQ9UGP5 575 aa26.28■■□□□ 1.8
TOP3A-219ENST00000584887 CCDC27Q2M243 656 aa26.27■■□□□ 1.8
TOP3A-219ENST00000584887 DEFB115Q30KQ5 88 aa26.27■■□□□ 1.8
TOP3A-219ENST00000584887 CCDC152Q4G0S7 254 aa26.27■■□□□ 1.8
TOP3A-219ENST00000584887 CDHR2Q9BYE9 1310 aa26.26■■□□□ 1.79
TOP3A-219ENST00000584887 PDE8AO60658 829 aa26.26■■□□□ 1.79
TOP3A-219ENST00000584887 TWISTNBQ3B726 338 aaPredicted RBP26.26■■□□□ 1.79
TOP3A-219ENST00000584887 PAXIP1Q6ZW49 1069 aaPredicted RBP26.26■■□□□ 1.79
TOP3A-219ENST00000584887 EYA3Q99504 573 aa26.26■■□□□ 1.79
TOP3A-219ENST00000584887 SALL2Q9Y467 1007 aaPredicted RBP26.26■■□□□ 1.79
TOP3A-219ENST00000584887 PI4KAP2A4QPH2 592 aa26.25■■□□□ 1.79
TOP3A-219ENST00000584887 ZNF316A6NFI3 1004 aaPredicted RBP26.25■■□□□ 1.79
TOP3A-219ENST00000584887 DOK7Q18PE1 504 aa26.25■■□□□ 1.79
TOP3A-219ENST00000584887 KSR2Q6VAB6 950 aa26.25■■□□□ 1.79
TOP3A-219ENST00000584887 PI4KAP1Q8N8J0 262 aa26.25■■□□□ 1.79
TOP3A-219ENST00000584887 ANKIB1Q9P2G1 1089 aa26.25■■□□□ 1.79
TOP3A-219ENST00000584887 SHTN1A0MZ66 631 aa26.24■■□□□ 1.79
TOP3A-219ENST00000584887 RASSF10A6NK89 507 aa26.24■■□□□ 1.79
TOP3A-219ENST00000584887 NEXNQ0ZGT2 675 aa26.24■■□□□ 1.79
TOP3A-219ENST00000584887 TBC1D16Q8TBP0 767 aa26.24■■□□□ 1.79
TOP3A-219ENST00000584887 TRPM4Q8TD43 1214 aa26.24■■□□□ 1.79
TOP3A-219ENST00000584887 AIDAQ96BJ3 306 aa26.24■■□□□ 1.79
TOP3A-219ENST00000584887 CNOT7Q9UIV1 285 aaKnown RBP26.24■■□□□ 1.79
TOP3A-219ENST00000584887 ZBTB12Q9Y330 459 aaPredicted RBP26.24■■□□□ 1.79
TOP3A-219ENST00000584887 PSMD14O00487 310 aa26.23■■□□□ 1.79
TOP3A-219ENST00000584887 ECE2O60344 883 aa26.23■■□□□ 1.79
TOP3A-219ENST00000584887 CAPN15O75808 1086 aa26.23■■□□□ 1.79
TOP3A-219ENST00000584887 UFL1O94874 794 aa26.23■■□□□ 1.79
TOP3A-219ENST00000584887 MICALL2Q8IY33 904 aa26.23■■□□□ 1.79
TOP3A-219ENST00000584887 G3V3G9 751 aa26.22■■□□□ 1.79
TOP3A-219ENST00000584887 H7C1D1 291 aa26.22■■□□□ 1.79
TOP3A-219ENST00000584887 FOXN1O15353 648 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms