RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 SP8Q8IXZ3 490 aa17.09■□□□□ 0.33
CDK5RAP3-234ENST00000584525 BCL2L13Q9BXK5 485 aa17.09■□□□□ 0.33
CDK5RAP3-234ENST00000584525 RTFDC1Q9BY42 306 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP3-234ENST00000584525 AOC2O75106 756 aa17.08■□□□□ 0.32
CDK5RAP3-234ENST00000584525 RAD17O75943 681 aa17.08■□□□□ 0.32
CDK5RAP3-234ENST00000584525 CIAPIN1Q6FI81 312 aa17.08■□□□□ 0.32
CDK5RAP3-234ENST00000584525 NLRP10Q86W26 655 aa17.08■□□□□ 0.32
CDK5RAP3-234ENST00000584525 XAGE3Q8WTP9 111 aa17.08■□□□□ 0.32
CDK5RAP3-234ENST00000584525 RUNDC1Q96C34 613 aa17.08■□□□□ 0.32
CDK5RAP3-234ENST00000584525 TRMT112Q9UI30 125 aaKnown RBP17.08■□□□□ 0.32
CDK5RAP3-234ENST00000584525 LAMB4A4D0S4 1761 aa17.07■□□□□ 0.32
CDK5RAP3-234ENST00000584525 LTBP1Q14766 1721 aa17.07■□□□□ 0.32
CDK5RAP3-234ENST00000584525 MAP2K2P36507 400 aa17.07■□□□□ 0.32
CDK5RAP3-234ENST00000584525 KIAA2012Q0VF49 1180 aa17.07■□□□□ 0.32
CDK5RAP3-234ENST00000584525 TNIP1Q15025 636 aa17.07■□□□□ 0.32
CDK5RAP3-234ENST00000584525 NEUROD2Q15784 382 aa17.07■□□□□ 0.32
CDK5RAP3-234ENST00000584525 GLIS2Q9BZE0 524 aaPredicted RBP17.07■□□□□ 0.32
CDK5RAP3-234ENST00000584525 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
CDK5RAP3-234ENST00000584525 BABAM1Q9NWV8 329 aa17.07■□□□□ 0.32
CDK5RAP3-234ENST00000584525 TSKSQ9UJT2 592 aa17.07■□□□□ 0.32
CDK5RAP3-234ENST00000584525 CCDC85CA6NKD9 419 aa17.06■□□□□ 0.32
CDK5RAP3-234ENST00000584525 GRAPQ13588 217 aa17.06■□□□□ 0.32
CDK5RAP3-234ENST00000584525 SAPCD2Q86UD0 394 aa17.06■□□□□ 0.32
CDK5RAP3-234ENST00000584525 GRAPLQ8TC17 118 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-234ENST00000584525 ADAMTS8Q9UP79 889 aa17.06■□□□□ 0.32
CDK5RAP3-234ENST00000584525 DLG5Q8TDM6 1919 aa17.06■□□□□ 0.32
CDK5RAP3-234ENST00000584525 SH3TC1Q8TE82 1336 aa17.05■□□□□ 0.32
CDK5RAP3-234ENST00000584525 TCIRG1Q13488 830 aa17.05■□□□□ 0.32
CDK5RAP3-234ENST00000584525 ZNF428Q96B54 188 aa17.05■□□□□ 0.32
CDK5RAP3-234ENST00000584525 KDM3BQ7LBC6 1761 aa17.05■□□□□ 0.32
CDK5RAP3-234ENST00000584525 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-234ENST00000584525 HIRAP54198 1017 aaPredicted RBP17.04■□□□□ 0.32
CDK5RAP3-234ENST00000584525 FAM161AQ3B820 660 aa17.04■□□□□ 0.32
CDK5RAP3-234ENST00000584525 ZC3H15Q8WU90 426 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-234ENST00000584525 PGAP2Q9UHJ9 254 aa17.04■□□□□ 0.32
CDK5RAP3-234ENST00000584525 CNOT7Q9UIV1 285 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-234ENST00000584525 CDHR2Q9BYE9 1310 aa17.03■□□□□ 0.32
CDK5RAP3-234ENST00000584525 H7C1D1 291 aa17.03■□□□□ 0.32
CDK5RAP3-234ENST00000584525 CDC37L1Q7L3B6 337 aa17.03■□□□□ 0.32
CDK5RAP3-234ENST00000584525 TRPM4Q8TD43 1214 aa17.03■□□□□ 0.32
CDK5RAP3-234ENST00000584525 LAS1LQ9Y4W2 734 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-234ENST00000584525 NUP98P52948 1817 aa17.03■□□□□ 0.32
CDK5RAP3-234ENST00000584525 YDJCA8MPS7 323 aa17.02■□□□□ 0.32
CDK5RAP3-234ENST00000584525 CA12O43570 354 aa17.02■□□□□ 0.32
CDK5RAP3-234ENST00000584525 TMC4Q7Z404 712 aa17.02■□□□□ 0.32
CDK5RAP3-234ENST00000584525 USP48Q86UV5 1035 aa17.02■□□□□ 0.32
CDK5RAP3-234ENST00000584525 HHIPL1Q96JK4 782 aa17.02■□□□□ 0.32
CDK5RAP3-234ENST00000584525 SHTN1A0MZ66 631 aa17.01■□□□□ 0.31
CDK5RAP3-234ENST00000584525 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
CDK5RAP3-234ENST00000584525 MICALL2Q8IY33 904 aa17.01■□□□□ 0.31
CDK5RAP3-234ENST00000584525 ZBTB12Q9Y330 459 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP3-234ENST00000584525 BRPF1P55201 1214 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-234ENST00000584525 WASHC4Q2M389 1173 aa17■□□□□ 0.31
CDK5RAP3-234ENST00000584525 CHPF2Q9P2E5 772 aa17■□□□□ 0.31
CDK5RAP3-234ENST00000584525 NSFL1CQ9UNZ2 370 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-234ENST00000584525 C6orf229H3BNL8 230 aa16.99■□□□□ 0.31
CDK5RAP3-234ENST00000584525 CHL1O00533 1208 aa16.99■□□□□ 0.31
CDK5RAP3-234ENST00000584525 RIMBP2O15034 1052 aa16.99■□□□□ 0.31
CDK5RAP3-234ENST00000584525 SAMD7Q7Z3H4 446 aa16.99■□□□□ 0.31
CDK5RAP3-234ENST00000584525 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
CDK5RAP3-234ENST00000584525 FAM89AQ96GI7 184 aa16.99■□□□□ 0.31
CDK5RAP3-234ENST00000584525 CFAP44Q96MT7 982 aa16.99■□□□□ 0.31
CDK5RAP3-234ENST00000584525 DBNDD1Q9H9R9 158 aa16.99■□□□□ 0.31
CDK5RAP3-234ENST00000584525 ATP5J2-PTCD1G3V325 749 aa16.98■□□□□ 0.31
CDK5RAP3-234ENST00000584525 PSMD14O00487 310 aa16.98■□□□□ 0.31
CDK5RAP3-234ENST00000584525 HUNKP57058 714 aa16.98■□□□□ 0.31
CDK5RAP3-234ENST00000584525 HDGFL1Q5TGJ6 251 aa16.98■□□□□ 0.31
CDK5RAP3-234ENST00000584525 ANKRD13DQ6ZTN6 518 aa16.98■□□□□ 0.31
CDK5RAP3-234ENST00000584525 FAM9BQ8IZU0 186 aa16.98■□□□□ 0.31
CDK5RAP3-234ENST00000584525 DPF2Q92785 391 aa16.98■□□□□ 0.31
CDK5RAP3-234ENST00000584525 CELF1Q92879 486 aaKnown RBP16.98■□□□□ 0.31
CDK5RAP3-234ENST00000584525 APAF1O14727 1248 aa16.97■□□□□ 0.31
CDK5RAP3-234ENST00000584525 MLLT1Q03111 559 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-234ENST00000584525 CALD1Q05682 793 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP3-234ENST00000584525 TBC1D10BQ4KMP7 808 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-234ENST00000584525 CCDC184Q52MB2 194 aa16.97■□□□□ 0.31
CDK5RAP3-234ENST00000584525 RBM26Q5T8P6 1007 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP3-234ENST00000584525 DLK2Q6UY11 383 aa16.97■□□□□ 0.31
CDK5RAP3-234ENST00000584525 MCOLN1Q9GZU1 580 aa16.97■□□□□ 0.31
CDK5RAP3-234ENST00000584525 GPSM2P81274 684 aa16.96■□□□□ 0.31
CDK5RAP3-234ENST00000584525 NOGQ13253 232 aa16.96■□□□□ 0.31
CDK5RAP3-234ENST00000584525 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-234ENST00000584525 DOK7Q18PE1 504 aa16.96■□□□□ 0.31
CDK5RAP3-234ENST00000584525 RTL5Q5HYW3 569 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-234ENST00000584525 KRT26Q7Z3Y9 468 aa16.96■□□□□ 0.31
CDK5RAP3-234ENST00000584525 EYA3Q99504 573 aa16.96■□□□□ 0.31
CDK5RAP3-234ENST00000584525 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.31
CDK5RAP3-234ENST00000584525 POLLQ9UGP5 575 aa16.96■□□□□ 0.31
CDK5RAP3-234ENST00000584525 THSD7BQ9C0I4 1608 aa16.96■□□□□ 0.3
CDK5RAP3-234ENST00000584525 DCPSQ96C86 337 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-234ENST00000584525 ZIC5Q96T25 663 aa16.95■□□□□ 0.3
CDK5RAP3-234ENST00000584525 DBF4Q9UBU7 674 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-234ENST00000584525 IRS4O14654 1257 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-234ENST00000584525 ECE2O60344 883 aa16.94■□□□□ 0.3
CDK5RAP3-234ENST00000584525 EGFRP00533 1210 aa16.94■□□□□ 0.3
CDK5RAP3-234ENST00000584525 RPS12P25398 132 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-234ENST00000584525 DGKZQ13574 1117 aa16.94■□□□□ 0.3
CDK5RAP3-234ENST00000584525 DIEXFQ68CQ4 756 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-234ENST00000584525 C2orf69Q8N8R5 385 aa16.94■□□□□ 0.3
CDK5RAP3-234ENST00000584525 KCNQ5Q9NR82 932 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms