RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 TRMT2AQ8IZ69 625 aaKnown RBP34.57■■■■□ 3.12
SMARCD2-210ENST00000584400 SUPT20HQ8NEM7 779 aa34.57■■■■□ 3.12
SMARCD2-210ENST00000584400 SNED1Q8TER0 1413 aa34.56■■■■□ 3.12
SMARCD2-210ENST00000584400 KIF3CO14782 793 aa34.56■■■■□ 3.12
SMARCD2-210ENST00000584400 CT47B1P0C2W7 299 aaPredicted RBP34.56■■■■□ 3.12
SMARCD2-210ENST00000584400 GCKRQ14397 625 aa34.56■■■■□ 3.12
SMARCD2-210ENST00000584400 NMRK2Q9NPI5 230 aa34.56■■■■□ 3.12
SMARCD2-210ENST00000584400 DDX60Q8IY21 1712 aaKnown RBP34.55■■■■□ 3.12
SMARCD2-210ENST00000584400 JDP2Q8WYK2 163 aa34.55■■■■□ 3.12
SMARCD2-210ENST00000584400 VPS33BQ9H267 617 aa34.55■■■■□ 3.12
SMARCD2-210ENST00000584400 H7C1W4 665 aa34.54■■■■□ 3.12
SMARCD2-210ENST00000584400 C16orf71Q8IYS4 520 aaPredicted RBP34.54■■■■□ 3.12
SMARCD2-210ENST00000584400 JARID2Q92833 1246 aaPredicted RBP34.54■■■■□ 3.12
SMARCD2-210ENST00000584400 LAMB2P55268 1798 aa34.54■■■■□ 3.12
SMARCD2-210ENST00000584400 DPP8Q6V1X1 898 aaPredicted RBP34.53■■■■□ 3.12
SMARCD2-210ENST00000584400 MPNDQ8N594 471 aa34.53■■■■□ 3.12
SMARCD2-210ENST00000584400 RPS8P62241 208 aaKnown RBP34.52■■■■□ 3.12
SMARCD2-210ENST00000584400 ALDH1L2Q3SY69 923 aa34.52■■■■□ 3.12
SMARCD2-210ENST00000584400 UBE3BQ7Z3V4 1068 aa34.52■■■■□ 3.12
SMARCD2-210ENST00000584400 CELF1Q92879 486 aaKnown RBP34.52■■■■□ 3.12
SMARCD2-210ENST00000584400 RRAGCQ9HB90 399 aa34.52■■■■□ 3.12
SMARCD2-210ENST00000584400 F6X3S4 739 aa34.51■■■■□ 3.12
SMARCD2-210ENST00000584400 TIAM2Q8IVF5 1701 aa34.51■■■■□ 3.12
SMARCD2-210ENST00000584400 MRPL50Q8N5N7 158 aaKnown RBP34.51■■■■□ 3.12
SMARCD2-210ENST00000584400 TOMM70O94826 608 aa34.5■■■■□ 3.11
SMARCD2-210ENST00000584400 CTSWP56202 376 aa34.5■■■■□ 3.11
SMARCD2-210ENST00000584400 BEND3Q5T5X7 828 aa34.5■■■■□ 3.11
SMARCD2-210ENST00000584400 RTFDC1Q9BY42 306 aaPredicted RBP34.5■■■■□ 3.11
SMARCD2-210ENST00000584400 PTPRCP08575 1304 aa34.5■■■■□ 3.11
SMARCD2-210ENST00000584400 VEGFAP15692 232 aaPredicted RBP34.49■■■■□ 3.11
SMARCD2-210ENST00000584400 LARGE2Q8N3Y3 721 aa34.49■■■■□ 3.11
SMARCD2-210ENST00000584400 SSH1Q8WYL5 1049 aa34.48■■■■□ 3.11
SMARCD2-210ENST00000584400 CCDC88AQ3V6T2 1871 aa34.48■■■■□ 3.11
SMARCD2-210ENST00000584400 HNRNPUQ00839 825 aaKnown RBP eCLIP34.47■■■■□ 3.11
SMARCD2-210ENST00000584400 CDC5LQ99459 802 aaKnown RBP34.47■■■■□ 3.11
SMARCD2-210ENST00000584400 PLA2G12BQ9BX93 195 aa34.47■■■■□ 3.11
SMARCD2-210ENST00000584400 DICER1Q9UPY3 1922 aaKnown RBP34.47■■■■□ 3.11
SMARCD2-210ENST00000584400 PPIP5K2O43314 1243 aa34.46■■■■□ 3.11
SMARCD2-210ENST00000584400 SLC4A10Q6U841 1118 aa34.46■■■■□ 3.11
SMARCD2-210ENST00000584400 FZD9O00144 591 aa34.45■■■■□ 3.11
SMARCD2-210ENST00000584400 ALDH1L1O75891 902 aa34.45■■■■□ 3.11
SMARCD2-210ENST00000584400 TTLL11Q8NHH1 800 aa34.45■■■■□ 3.11
SMARCD2-210ENST00000584400 CCDC85AQ96PX6 553 aaPredicted RBP34.45■■■■□ 3.11
SMARCD2-210ENST00000584400 SRCIN1Q9C0H9 1055 aa34.45■■■■□ 3.11
SMARCD2-210ENST00000584400 SEC31BQ9NQW1 1179 aa34.45■■■■□ 3.11
SMARCD2-210ENST00000584400 EIF6P56537 245 aaKnown RBP34.44■■■■□ 3.1
SMARCD2-210ENST00000584400 ANKRD18AQ8IVF6 992 aa34.44■■■■□ 3.1
SMARCD2-210ENST00000584400 NIM1KQ8IY84 436 aa34.44■■■■□ 3.1
SMARCD2-210ENST00000584400 SMC4Q9NTJ3 1288 aa34.44■■■■□ 3.1
SMARCD2-210ENST00000584400 NSFL1CQ9UNZ2 370 aaKnown RBP34.44■■■■□ 3.1
SMARCD2-210ENST00000584400 DDNO94850 711 aaPredicted RBP34.43■■■■□ 3.1
SMARCD2-210ENST00000584400 RTL9Q8NET4 1388 aa34.42■■■■□ 3.1
SMARCD2-210ENST00000584400 CASP7P55210 303 aa34.42■■■■□ 3.1
SMARCD2-210ENST00000584400 SLC51AQ86UW1 340 aa34.42■■■■□ 3.1
SMARCD2-210ENST00000584400 RBM46Q8TBY0 533 aaKnown RBP34.41■■■■□ 3.1
SMARCD2-210ENST00000584400 C9orf78Q9NZ63 289 aaPredicted RBP34.41■■■■□ 3.1
SMARCD2-210ENST00000584400 IQCA1LA6NCM1 817 aa34.4■■■■□ 3.1
SMARCD2-210ENST00000584400 GRM8O00222 908 aa34.4■■■■□ 3.1
SMARCD2-210ENST00000584400 AOC3Q16853 763 aa34.4■■■■□ 3.1
SMARCD2-210ENST00000584400 BCL2L13Q9BXK5 485 aa34.4■■■■□ 3.1
SMARCD2-210ENST00000584400 KIAA2012Q0VF49 1180 aa34.39■■■■□ 3.1
SMARCD2-210ENST00000584400 GREM2Q9H772 168 aa34.39■■■■□ 3.1
SMARCD2-210ENST00000584400 GPC2Q8N158 579 aa34.38■■■■□ 3.09
SMARCD2-210ENST00000584400 L3MBTL3Q96JM7 780 aaPredicted RBP34.38■■■■□ 3.09
SMARCD2-210ENST00000584400 EYA3Q99504 573 aa34.38■■■■□ 3.09
SMARCD2-210ENST00000584400 ZNF541Q9H0D2 1346 aa34.37■■■■□ 3.09
SMARCD2-210ENST00000584400 WDR90Q96KV7 1748 aa34.36■■■■□ 3.09
SMARCD2-210ENST00000584400 C6orf229H3BNL8 230 aa34.36■■■■□ 3.09
SMARCD2-210ENST00000584400 CSF1RP07333 972 aa34.36■■■■□ 3.09
SMARCD2-210ENST00000584400 GPSM2P81274 684 aa34.36■■■■□ 3.09
SMARCD2-210ENST00000584400 WASHC4Q2M389 1173 aa34.36■■■■□ 3.09
SMARCD2-210ENST00000584400 PODXL2Q9NZ53 605 aa34.36■■■■□ 3.09
SMARCD2-210ENST00000584400 ANKIB1Q9P2G1 1089 aa34.36■■■■□ 3.09
SMARCD2-210ENST00000584400 IGHMBP2P38935 993 aaKnown RBP34.35■■■■□ 3.09
SMARCD2-210ENST00000584400 ZNRF3Q9ULT6 936 aa34.35■■■■□ 3.09
SMARCD2-210ENST00000584400 LRRC37AA6NMS7 1700 aa34.35■■■■□ 3.09
SMARCD2-210ENST00000584400 BRPF1P55201 1214 aaPredicted RBP34.34■■■■□ 3.09
SMARCD2-210ENST00000584400 FSTL1Q12841 308 aa34.34■■■■□ 3.09
SMARCD2-210ENST00000584400 BSDC1Q9NW68 430 aaPredicted RBP34.34■■■■□ 3.09
SMARCD2-210ENST00000584400 POTECB2RU33 542 aa34.33■■■■□ 3.09
SMARCD2-210ENST00000584400 ITGA6P23229 1130 aa34.33■■■■□ 3.09
SMARCD2-210ENST00000584400 SMC1BQ8NDV3 1235 aa34.32■■■■□ 3.08
SMARCD2-210ENST00000584400 GGA1Q9UJY5 639 aa34.32■■■■□ 3.08
SMARCD2-210ENST00000584400 TAF1P21675 1872 aa34.31■■■■□ 3.08
SMARCD2-210ENST00000584400 TBC1D16Q8TBP0 767 aa34.31■■■■□ 3.08
SMARCD2-210ENST00000584400 POLLQ9UGP5 575 aa34.31■■■■□ 3.08
SMARCD2-210ENST00000584400 GJA3Q9Y6H8 435 aa34.31■■■■□ 3.08
SMARCD2-210ENST00000584400 XDHP47989 1333 aa34.3■■■■□ 3.08
SMARCD2-210ENST00000584400 ANKRD18BA2A2Z9 1011 aa34.3■■■■□ 3.08
SMARCD2-210ENST00000584400 RARSP54136 660 aaKnown RBP34.3■■■■□ 3.08
SMARCD2-210ENST00000584400 FAM161AQ3B820 660 aa34.3■■■■□ 3.08
SMARCD2-210ENST00000584400 MPHOSPH8Q99549 860 aa34.3■■■■□ 3.08
SMARCD2-210ENST00000584400 API5Q9BZZ5 524 aaKnown RBP34.3■■■■□ 3.08
SMARCD2-210ENST00000584400 ZC3H12CQ9C0D7 883 aaKnown RBP34.3■■■■□ 3.08
SMARCD2-210ENST00000584400 HACL1Q9UJ83 578 aa34.3■■■■□ 3.08
SMARCD2-210ENST00000584400 FOXO4P98177 505 aa34.29■■■■□ 3.08
SMARCD2-210ENST00000584400 IFIT5Q13325 482 aaKnown RBP34.29■■■■□ 3.08
SMARCD2-210ENST00000584400 CHMP3Q9Y3E7 222 aa34.29■■■■□ 3.08
SMARCD2-210ENST00000584400 UFL1O94874 794 aa34.28■■■■□ 3.08
SMARCD2-210ENST00000584400 NOB1Q9ULX3 412 aaKnown RBP34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms