RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 DDNO94850 711 aaPredicted RBP7.21□□□□□ -1.26
VAPA-207ENST00000583879 PRR5LQ6MZQ0 368 aa7.21□□□□□ -1.26
VAPA-207ENST00000583879 PACS2Q86VP3 889 aa7.21□□□□□ -1.26
VAPA-207ENST00000583879 CCDC24Q8N4L8 307 aa7.21□□□□□ -1.26
VAPA-207ENST00000583879 CNKSR1Q969H4 720 aa7.21□□□□□ -1.26
VAPA-207ENST00000583879 TBC1D2BQ9UPU7 963 aa7.21□□□□□ -1.26
VAPA-207ENST00000583879 ARFGEF1Q9Y6D6 1849 aa7.21□□□□□ -1.26
VAPA-207ENST00000583879 CLSPNQ9HAW4 1339 aa7.21□□□□□ -1.26
VAPA-207ENST00000583879 CARMIL3Q8ND23 1372 aa7.2□□□□□ -1.26
VAPA-207ENST00000583879 DIAPH1O60610 1272 aaKnown RBP7.2□□□□□ -1.26
VAPA-207ENST00000583879 SRGNP10124 158 aa7.2□□□□□ -1.26
VAPA-207ENST00000583879 IL6STP40189 918 aaPredicted RBP7.2□□□□□ -1.26
VAPA-207ENST00000583879 PPP4CP60510 307 aa7.2□□□□□ -1.26
VAPA-207ENST00000583879 CAMK2BQ13554 666 aa7.2□□□□□ -1.26
VAPA-207ENST00000583879 STYK1Q6J9G0 422 aa7.2□□□□□ -1.26
VAPA-207ENST00000583879 ZNF790Q6PG37 636 aa7.2□□□□□ -1.26
VAPA-207ENST00000583879 NPM2Q86SE8 214 aaKnown RBP7.2□□□□□ -1.26
VAPA-207ENST00000583879 IL17REQ8NFR9 667 aa7.2□□□□□ -1.26
VAPA-207ENST00000583879 ZNF496Q96IT1 587 aaPredicted RBP7.2□□□□□ -1.26
VAPA-207ENST00000583879 SETDB2Q96T68 719 aa7.2□□□□□ -1.26
VAPA-207ENST00000583879 TAOK3Q9H2K8 898 aa7.2□□□□□ -1.26
VAPA-207ENST00000583879 MKRN1Q9UHC7 482 aaKnown RBP7.2□□□□□ -1.26
VAPA-207ENST00000583879 LTBP3Q9NS15 1303 aa7.2□□□□□ -1.26
VAPA-207ENST00000583879 PCNTO95613 3336 aa7.2□□□□□ -1.26
VAPA-207ENST00000583879 ADAMTS7Q9UKP4 1686 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 TJP1Q07157 1748 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 IQCA1LA6NCM1 817 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 GNAT3A8MTJ3 354 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 NPHP1O15259 732 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 A1BGP04217 495 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 TEFQ10587 303 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 SOGA3Q5TF21 947 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 TRAF7Q6Q0C0 670 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 DDX12PQ92771 950 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 MASTLQ96GX5 879 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 PCGF6Q9BYE7 350 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 ZNF330Q9Y3S2 320 aaPredicted RBP7.19□□□□□ -1.26
VAPA-207ENST00000583879 HEG1Q9ULI3 1381 aa7.19□□□□□ -1.26
VAPA-207ENST00000583879 TNRC6CQ9HCJ0 1690 aaKnown RBP7.19□□□□□ -1.26
VAPA-207ENST00000583879 PER1O15534 1290 aaPredicted RBP7.18□□□□□ -1.26
VAPA-207ENST00000583879 CAMTA2O94983 1202 aa7.18□□□□□ -1.26
VAPA-207ENST00000583879 ST5P78524 1137 aa7.18□□□□□ -1.26
VAPA-207ENST00000583879 PRPF40BQ6NWY9 871 aaKnown RBP7.18□□□□□ -1.26
VAPA-207ENST00000583879 LDHDQ86WU2 507 aa7.18□□□□□ -1.26
VAPA-207ENST00000583879 CNBD1Q8NA66 436 aa7.18□□□□□ -1.26
VAPA-207ENST00000583879 C7orf43Q8WVR3 580 aa7.18□□□□□ -1.26
VAPA-207ENST00000583879 FMNL2Q96PY5 1086 aa7.18□□□□□ -1.26
VAPA-207ENST00000583879 TAF1DQ9H5J8 278 aaPredicted RBP7.18□□□□□ -1.26
VAPA-207ENST00000583879 PRDM10Q9NQV6 1147 aa7.18□□□□□ -1.26
VAPA-207ENST00000583879 PASKQ96RG2 1323 aa7.18□□□□□ -1.26
VAPA-207ENST00000583879 MRC1P22897 1456 aa7.17□□□□□ -1.26
VAPA-207ENST00000583879 SBF1O95248 1867 aa7.17□□□□□ -1.26
VAPA-207ENST00000583879 KLRG2A4D1S0 409 aaPredicted RBP7.17□□□□□ -1.26
VAPA-207ENST00000583879 TMEM88BA6NKF7 163 aa7.17□□□□□ -1.26
VAPA-207ENST00000583879 FOXN1O15353 648 aa7.17□□□□□ -1.26
VAPA-207ENST00000583879 MAP3K7O43318 606 aa7.17□□□□□ -1.26
VAPA-207ENST00000583879 KCNQ3O43525 872 aa7.17□□□□□ -1.26
VAPA-207ENST00000583879 CLEC4GQ6UXB4 293 aa7.17□□□□□ -1.26
VAPA-207ENST00000583879 DZIP3Q86Y13 1208 aaKnown RBP7.17□□□□□ -1.26
VAPA-207ENST00000583879 GAS2L2Q8NHY3 880 aa7.17□□□□□ -1.26
VAPA-207ENST00000583879 USP16Q9Y5T5 823 aa7.17□□□□□ -1.26
VAPA-207ENST00000583879 NRXN2Q9P2S2 1712 aa7.17□□□□□ -1.26
VAPA-207ENST00000583879 CNTNAP1P78357 1384 aa7.17□□□□□ -1.26
VAPA-207ENST00000583879 BTBD11A6QL63 1104 aa7.16□□□□□ -1.26
VAPA-207ENST00000583879 U2SURPO15042 1029 aaKnown RBP7.16□□□□□ -1.26
VAPA-207ENST00000583879 NPR1P16066 1061 aa7.16□□□□□ -1.26
VAPA-207ENST00000583879 CTCFP49711 727 aaPredicted RBP7.16□□□□□ -1.26
VAPA-207ENST00000583879 VEGFBP49765 207 aa7.16□□□□□ -1.26
VAPA-207ENST00000583879 PLCB2Q00722 1185 aa7.16□□□□□ -1.26
VAPA-207ENST00000583879 FKBP4Q02790 459 aaKnown RBP eCLIP7.16□□□□□ -1.26
VAPA-207ENST00000583879 NBR1Q14596 966 aa7.16□□□□□ -1.26
VAPA-207ENST00000583879 CCDC93Q567U6 631 aa7.16□□□□□ -1.26
VAPA-207ENST00000583879 CC2D1BQ5T0F9 858 aaKnown RBP7.16□□□□□ -1.26
VAPA-207ENST00000583879 TPTE2Q6XPS3 522 aa7.16□□□□□ -1.26
VAPA-207ENST00000583879 NBPF5PQ86XG9 351 aaPredicted RBP7.16□□□□□ -1.26
VAPA-207ENST00000583879 RTKN2Q8IZC4 609 aa7.16□□□□□ -1.26
VAPA-207ENST00000583879 TSKSQ9UJT2 592 aa7.16□□□□□ -1.26
VAPA-207ENST00000583879 SCN11AQ9UI33 1791 aa7.15□□□□□ -1.26
VAPA-207ENST00000583879 PRKCSHP14314 528 aaPredicted RBP7.15□□□□□ -1.26
VAPA-207ENST00000583879 ALDH1B1P30837 517 aa7.15□□□□□ -1.26
VAPA-207ENST00000583879 DEFB115Q30KQ5 88 aa7.15□□□□□ -1.26
VAPA-207ENST00000583879 EAPPQ56P03 285 aaPredicted RBP7.15□□□□□ -1.26
VAPA-207ENST00000583879 PNMA8AQ86V59 439 aaPredicted RBP7.15□□□□□ -1.26
VAPA-207ENST00000583879 CNTROBQ8N137 903 aa7.15□□□□□ -1.26
VAPA-207ENST00000583879 AIDAQ96BJ3 306 aa7.15□□□□□ -1.26
VAPA-207ENST00000583879 PHACTR3Q96KR7 559 aa7.15□□□□□ -1.26
VAPA-207ENST00000583879 PRKD2Q9BZL6 878 aa7.15□□□□□ -1.26
VAPA-207ENST00000583879 ZNF277Q9NRM2 450 aaPredicted RBP7.15□□□□□ -1.26
VAPA-207ENST00000583879 HACL1Q9UJ83 578 aa7.15□□□□□ -1.26
VAPA-207ENST00000583879 PRAMEF22A3QJZ6 481 aa7.14□□□□□ -1.27
VAPA-207ENST00000583879 RASSF10A6NK89 507 aa7.14□□□□□ -1.27
VAPA-207ENST00000583879 FZD9O00144 591 aa7.14□□□□□ -1.27
VAPA-207ENST00000583879 LCE2BO14633 110 aa7.14□□□□□ -1.27
VAPA-207ENST00000583879 SNRPA1P09661 255 aaKnown RBP7.14□□□□□ -1.27
VAPA-207ENST00000583879 EPHX2P34913 555 aa7.14□□□□□ -1.27
VAPA-207ENST00000583879 PIP4K2AP48426 406 aaPredicted RBP7.14□□□□□ -1.27
VAPA-207ENST00000583879 LBX1P52954 281 aa7.14□□□□□ -1.27
VAPA-207ENST00000583879 AFDNP55196 1824 aaKnown RBP7.14□□□□□ -1.27
VAPA-207ENST00000583879 KIF7Q2M1P5 1343 aa7.14□□□□□ -1.27
VAPA-207ENST00000583879 TSR1Q2NL82 804 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms