RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 GCKRQ14397 625 aa21.5■■□□□ 1.03
TSEN54-211ENST00000583818 SEC31BQ9NQW1 1179 aa21.5■■□□□ 1.03
TSEN54-211ENST00000583818 DICER1Q9UPY3 1922 aaKnown RBP21.49■■□□□ 1.03
TSEN54-211ENST00000583818 SLC4A10Q6U841 1118 aa21.49■■□□□ 1.03
TSEN54-211ENST00000583818 ATP6V0A2Q9Y487 856 aa21.49■■□□□ 1.03
TSEN54-211ENST00000583818 PDE8AO60658 829 aa21.48■■□□□ 1.03
TSEN54-211ENST00000583818 BEND3Q5T5X7 828 aa21.48■■□□□ 1.03
TSEN54-211ENST00000583818 LINS1Q8NG48 757 aa21.48■■□□□ 1.03
TSEN54-211ENST00000583818 CDHR2Q9BYE9 1310 aa21.48■■□□□ 1.03
TSEN54-211ENST00000583818 H7C1W4 665 aa21.47■■□□□ 1.03
TSEN54-211ENST00000583818 BBOX1O75936 387 aa21.47■■□□□ 1.03
TSEN54-211ENST00000583818 COL4A5P29400 1685 aa21.47■■□□□ 1.03
TSEN54-211ENST00000583818 KIF3CO14782 793 aa21.46■■□□□ 1.03
TSEN54-211ENST00000583818 IARSP41252 1262 aaKnown RBP21.46■■□□□ 1.03
TSEN54-211ENST00000583818 CC2D2BQ6DHV5 1058 aa21.46■■□□□ 1.03
TSEN54-211ENST00000583818 SMC4Q9NTJ3 1288 aa21.46■■□□□ 1.03
TSEN54-211ENST00000583818 CASP7P55210 303 aa21.45■■□□□ 1.02
TSEN54-211ENST00000583818 CTSWP56202 376 aa21.45■■□□□ 1.02
TSEN54-211ENST00000583818 SP8Q8IXZ3 490 aa21.45■■□□□ 1.02
TSEN54-211ENST00000583818 PSMD1Q99460 953 aa21.45■■□□□ 1.02
TSEN54-211ENST00000583818 CCDC152Q4G0S7 254 aa21.44■■□□□ 1.02
TSEN54-211ENST00000583818 TMX4Q9H1E5 349 aaPredicted RBP21.44■■□□□ 1.02
TSEN54-211ENST00000583818 RRAGCQ9HB90 399 aa21.44■■□□□ 1.02
TSEN54-211ENST00000583818 KDM2BQ8NHM5 1336 aa21.44■■□□□ 1.02
TSEN54-211ENST00000583818 MYH3P11055 1940 aa21.43■■□□□ 1.02
TSEN54-211ENST00000583818 GLTPD2A6NH11 291 aa21.43■■□□□ 1.02
TSEN54-211ENST00000583818 HSP90B1P14625 803 aaKnown RBP21.43■■□□□ 1.02
TSEN54-211ENST00000583818 DPP8Q6V1X1 898 aaPredicted RBP21.43■■□□□ 1.02
TSEN54-211ENST00000583818 MPNDQ8N594 471 aa21.43■■□□□ 1.02
TSEN54-211ENST00000583818 TTLL11Q8NHH1 800 aa21.43■■□□□ 1.02
TSEN54-211ENST00000583818 GREM2Q9H772 168 aa21.43■■□□□ 1.02
TSEN54-211ENST00000583818 ZNF541Q9H0D2 1346 aa21.43■■□□□ 1.02
TSEN54-211ENST00000583818 ZC3H4Q9UPT8 1303 aaKnown RBP21.43■■□□□ 1.02
TSEN54-211ENST00000583818 LRRC37AA6NMS7 1700 aa21.43■■□□□ 1.02
TSEN54-211ENST00000583818 RPS8P62241 208 aaKnown RBP21.42■■□□□ 1.02
TSEN54-211ENST00000583818 AOC3Q16853 763 aa21.42■■□□□ 1.02
TSEN54-211ENST00000583818 ALDH1L2Q3SY69 923 aa21.42■■□□□ 1.02
TSEN54-211ENST00000583818 SPEF2Q9C093 1822 aa21.41■■□□□ 1.02
TSEN54-211ENST00000583818 DUOX1Q9NRD9 1551 aa21.41■■□□□ 1.02
TSEN54-211ENST00000583818 DDNO94850 711 aaPredicted RBP21.41■■□□□ 1.02
TSEN54-211ENST00000583818 C1QTNF8P60827 252 aa21.41■■□□□ 1.02
TSEN54-211ENST00000583818 GPSM2P81274 684 aa21.41■■□□□ 1.02
TSEN54-211ENST00000583818 PTPRCP08575 1304 aa21.4■■□□□ 1.02
TSEN54-211ENST00000583818 PPIP5K2O43314 1243 aa21.4■■□□□ 1.02
TSEN54-211ENST00000583818 LARGE2Q8N3Y3 721 aa21.4■■□□□ 1.02
TSEN54-211ENST00000583818 GPR101Q96P66 508 aaPredicted RBP21.4■■□□□ 1.02
TSEN54-211ENST00000583818 SRCIN1Q9C0H9 1055 aa21.4■■□□□ 1.02
TSEN54-211ENST00000583818 NSFL1CQ9UNZ2 370 aaKnown RBP21.4■■□□□ 1.02
TSEN54-211ENST00000583818 RARSP54136 660 aaKnown RBP21.39■■□□□ 1.01
TSEN54-211ENST00000583818 FAM161AQ3B820 660 aa21.39■■□□□ 1.01
TSEN54-211ENST00000583818 EPHA10Q5JZY3 1008 aa21.39■■□□□ 1.01
TSEN54-211ENST00000583818 NOB1Q9ULX3 412 aaKnown RBP21.39■■□□□ 1.01
TSEN54-211ENST00000583818 GRM8O00222 908 aa21.38■■□□□ 1.01
TSEN54-211ENST00000583818 CT47B1P0C2W7 299 aaPredicted RBP21.38■■□□□ 1.01
TSEN54-211ENST00000583818 GRIPAP1Q4V328 841 aa21.38■■□□□ 1.01
TSEN54-211ENST00000583818 DPY19L2Q6NUT2 758 aa21.38■■□□□ 1.01
TSEN54-211ENST00000583818 TMC4Q7Z404 712 aa21.38■■□□□ 1.01
TSEN54-211ENST00000583818 ANKRD18AQ8IVF6 992 aa21.38■■□□□ 1.01
TSEN54-211ENST00000583818 PLA2G12BQ9BX93 195 aa21.38■■□□□ 1.01
TSEN54-211ENST00000583818 RTFDC1Q9BY42 306 aaPredicted RBP21.38■■□□□ 1.01
TSEN54-211ENST00000583818 C9orf78Q9NZ63 289 aaPredicted RBP21.38■■□□□ 1.01
TSEN54-211ENST00000583818 ALDH1L1O75891 902 aa21.37■■□□□ 1.01
TSEN54-211ENST00000583818 FOXO4P98177 505 aa21.37■■□□□ 1.01
TSEN54-211ENST00000583818 JDP2Q8WYK2 163 aa21.37■■□□□ 1.01
TSEN54-211ENST00000583818 POTECB2RU33 542 aa21.36■■□□□ 1.01
TSEN54-211ENST00000583818 FZD9O00144 591 aa21.36■■□□□ 1.01
TSEN54-211ENST00000583818 NBPF7P0C2Y1 421 aaPredicted RBP21.36■■□□□ 1.01
TSEN54-211ENST00000583818 POLLQ9UGP5 575 aa21.36■■□□□ 1.01
TSEN54-211ENST00000583818 CHMP3Q9Y3E7 222 aa21.36■■□□□ 1.01
TSEN54-211ENST00000583818 LTBP1Q14766 1721 aa21.35■■□□□ 1.01
TSEN54-211ENST00000583818 ZBED9Q6R2W3 1325 aa21.35■■□□□ 1.01
TSEN54-211ENST00000583818 C6orf229H3BNL8 230 aa21.35■■□□□ 1.01
TSEN54-211ENST00000583818 RIMBP2O15034 1052 aa21.35■■□□□ 1.01
TSEN54-211ENST00000583818 ITGA6P23229 1130 aa21.35■■□□□ 1.01
TSEN54-211ENST00000583818 NIM1KQ8IY84 436 aa21.35■■□□□ 1.01
TSEN54-211ENST00000583818 SUPT20HQ8NEM7 779 aa21.35■■□□□ 1.01
TSEN54-211ENST00000583818 SUCLG2Q96I99 432 aa21.35■■□□□ 1.01
TSEN54-211ENST00000583818 CDC5LQ99459 802 aaKnown RBP21.35■■□□□ 1.01
TSEN54-211ENST00000583818 WDR90Q96KV7 1748 aa21.35■■□□□ 1.01
TSEN54-211ENST00000583818 WTIPA6NIX2 430 aaPredicted RBP21.34■■□□□ 1.01
TSEN54-211ENST00000583818 BCAR3O75815 825 aa21.34■■□□□ 1.01
TSEN54-211ENST00000583818 CSF1RP07333 972 aa21.34■■□□□ 1.01
TSEN54-211ENST00000583818 ANKIB1Q9P2G1 1089 aa21.34■■□□□ 1.01
TSEN54-211ENST00000583818 GJA3Q9Y6H8 435 aa21.34■■□□□ 1.01
TSEN54-211ENST00000583818 RTL9Q8NET4 1388 aa21.34■■□□□ 1.01
TSEN54-211ENST00000583818 KIAA2012Q0VF49 1180 aa21.33■■□□□ 1.01
TSEN54-211ENST00000583818 LMBR1LQ6UX01 489 aa21.33■■□□□ 1.01
TSEN54-211ENST00000583818 C16orf71Q8IYS4 520 aaPredicted RBP21.33■■□□□ 1.01
TSEN54-211ENST00000583818 TBC1D16Q8TBP0 767 aa21.33■■□□□ 1.01
TSEN54-211ENST00000583818 TNNQ9UQP3 1299 aa21.33■■□□□ 1.01
TSEN54-211ENST00000583818 UFL1O94874 794 aa21.32■■□□□ 1
TSEN54-211ENST00000583818 VEGFAP15692 232 aaPredicted RBP21.32■■□□□ 1
TSEN54-211ENST00000583818 EIF6P56537 245 aaKnown RBP21.32■■□□□ 1
TSEN54-211ENST00000583818 KAZALD1Q96I82 304 aa21.32■■□□□ 1
TSEN54-211ENST00000583818 TOMM70O94826 608 aa21.31■■□□□ 1
TSEN54-211ENST00000583818 WASHC4Q2M389 1173 aa21.31■■□□□ 1
TSEN54-211ENST00000583818 ZNF594Q96JF6 807 aaPredicted RBP21.31■■□□□ 1
TSEN54-211ENST00000583818 DBNDD1Q9H9R9 158 aa21.31■■□□□ 1
TSEN54-211ENST00000583818 IGHMBP2P38935 993 aaKnown RBP21.3■■□□□ 1
TSEN54-211ENST00000583818 DOK7Q18PE1 504 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms