RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 TMX4Q9H1E5 349 aaPredicted RBP11.66□□□□□ -0.54
UBBP4-201ENST00000583708 ZBTB40Q9NUA8 1239 aa11.66□□□□□ -0.54
UBBP4-201ENST00000583708 FOXO4P98177 505 aa11.65□□□□□ -0.54
UBBP4-201ENST00000583708 DCAF8L1A6NGE4 600 aa11.64□□□□□ -0.55
UBBP4-201ENST00000583708 DPEP1P16444 411 aa11.64□□□□□ -0.55
UBBP4-201ENST00000583708 RPS8P62241 208 aaKnown RBP11.64□□□□□ -0.55
UBBP4-201ENST00000583708 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
UBBP4-201ENST00000583708 CCDC57Q2TAC2 916 aa11.64□□□□□ -0.55
UBBP4-201ENST00000583708 DALRD3Q5D0E6 543 aaKnown RBP11.64□□□□□ -0.55
UBBP4-201ENST00000583708 LMBR1LQ6UX01 489 aa11.64□□□□□ -0.55
UBBP4-201ENST00000583708 SYNE4Q8N205 404 aa11.64□□□□□ -0.55
UBBP4-201ENST00000583708 MEIS3Q99687 375 aa11.64□□□□□ -0.55
UBBP4-201ENST00000583708 COG6Q9Y2V7 657 aa11.64□□□□□ -0.55
UBBP4-201ENST00000583708 ABCC12Q96J65 1359 aa11.64□□□□□ -0.55
UBBP4-201ENST00000583708 AFDNP55196 1824 aaKnown RBP11.63□□□□□ -0.55
UBBP4-201ENST00000583708 KIF13BQ9NQT8 1826 aa11.63□□□□□ -0.55
UBBP4-201ENST00000583708 ANKRD18BA2A2Z9 1011 aa11.63□□□□□ -0.55
UBBP4-201ENST00000583708 HMMRO75330 724 aa11.63□□□□□ -0.55
UBBP4-201ENST00000583708 KCNA3P22001 575 aa11.63□□□□□ -0.55
UBBP4-201ENST00000583708 GRAPQ13588 217 aa11.63□□□□□ -0.55
UBBP4-201ENST00000583708 ERICH6BQ5W0A0 696 aa11.63□□□□□ -0.55
UBBP4-201ENST00000583708 GRAPLQ8TC17 118 aaPredicted RBP11.63□□□□□ -0.55
UBBP4-201ENST00000583708 SUCLG2Q96I99 432 aa11.63□□□□□ -0.55
UBBP4-201ENST00000583708 N4BP2Q86UW6 1770 aaPredicted RBP11.63□□□□□ -0.55
UBBP4-201ENST00000583708 A0A0G2JLW4 131 aa11.62□□□□□ -0.55
UBBP4-201ENST00000583708 GRIN3BO60391 1043 aa11.62□□□□□ -0.55
UBBP4-201ENST00000583708 IGHMBP2P38935 993 aaKnown RBP11.62□□□□□ -0.55
UBBP4-201ENST00000583708 ATP8B2P98198 1209 aa11.62□□□□□ -0.55
UBBP4-201ENST00000583708 RTL5Q5HYW3 569 aaPredicted RBP11.62□□□□□ -0.55
UBBP4-201ENST00000583708 ANKRD18AQ8IVF6 992 aa11.62□□□□□ -0.55
UBBP4-201ENST00000583708 SP8Q8IXZ3 490 aa11.62□□□□□ -0.55
UBBP4-201ENST00000583708 ZNF622Q969S3 477 aaKnown RBP eCLIP11.62□□□□□ -0.553e-16■■□□□ 12.2
UBBP4-201ENST00000583708 KAZALD1Q96I82 304 aa11.62□□□□□ -0.55
UBBP4-201ENST00000583708 VPS33BQ9H267 617 aa11.62□□□□□ -0.55
UBBP4-201ENST00000583708 BICC1Q9H694 974 aaKnown RBP11.62□□□□□ -0.55
UBBP4-201ENST00000583708 BSDC1Q9NW68 430 aaPredicted RBP11.62□□□□□ -0.55
UBBP4-201ENST00000583708 TNNQ9UQP3 1299 aa11.62□□□□□ -0.55
UBBP4-201ENST00000583708 LRRFIP2Q9Y608 721 aaKnown RBP11.62□□□□□ -0.55
UBBP4-201ENST00000583708 ITGA6P23229 1130 aa11.61□□□□□ -0.55
UBBP4-201ENST00000583708 HSP90AB4PQ58FF6 505 aa11.61□□□□□ -0.55
UBBP4-201ENST00000583708 C20orf194Q5TEA3 1177 aa11.61□□□□□ -0.55
UBBP4-201ENST00000583708 RTKN2Q8IZC4 609 aa11.61□□□□□ -0.55
UBBP4-201ENST00000583708 ANKRD44Q8N8A2 993 aa11.61□□□□□ -0.55
UBBP4-201ENST00000583708 COPRSQ9NQ92 184 aa11.61□□□□□ -0.55
UBBP4-201ENST00000583708 ATP6V0A2Q9Y487 856 aa11.61□□□□□ -0.55
UBBP4-201ENST00000583708 NEFLP07196 543 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 CHRNA5P30532 468 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 TAF7LQ5H9L4 462 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 EPHA10Q5JZY3 1008 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 SSH3Q8TE77 659 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 C7orf43Q8WVR3 580 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 JARID2Q92833 1246 aaPredicted RBP11.6□□□□□ -0.55
UBBP4-201ENST00000583708 MPHOSPH8Q99549 860 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 ANKRD2Q9GZV1 360 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 GREM2Q9H772 168 aa11.6□□□□□ -0.55
UBBP4-201ENST00000583708 SRGAP3O43295 1099 aa11.59□□□□□ -0.55
UBBP4-201ENST00000583708 CIAO1O76071 339 aa11.59□□□□□ -0.55
UBBP4-201ENST00000583708 POLA2Q14181 598 aa11.59□□□□□ -0.55
UBBP4-201ENST00000583708 PRPF40BQ6NWY9 871 aaKnown RBP11.59□□□□□ -0.55
UBBP4-201ENST00000583708 LDHAL6AQ6ZMR3 332 aa11.59□□□□□ -0.55
UBBP4-201ENST00000583708 SUPT20HQ8NEM7 779 aa11.59□□□□□ -0.55
UBBP4-201ENST00000583708 CHMP3Q9Y3E7 222 aa11.59□□□□□ -0.55
UBBP4-201ENST00000583708 LAMB2P55268 1798 aa11.59□□□□□ -0.55
UBBP4-201ENST00000583708 PPEF1O14829 653 aaPredicted RBP11.58□□□□□ -0.56
UBBP4-201ENST00000583708 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
UBBP4-201ENST00000583708 CCDC93Q567U6 631 aa11.58□□□□□ -0.56
UBBP4-201ENST00000583708 CEP85Q6P2H3 762 aa11.58□□□□□ -0.56
UBBP4-201ENST00000583708 NLGN2Q8NFZ4 835 aa11.58□□□□□ -0.56
UBBP4-201ENST00000583708 CRBNQ96SW2 442 aa11.58□□□□□ -0.56
UBBP4-201ENST00000583708 PODXL2Q9NZ53 605 aa11.58□□□□□ -0.56
UBBP4-201ENST00000583708 NOP58Q9Y2X3 529 aaKnown RBP11.58□□□□□ -0.56
UBBP4-201ENST00000583708 MROH5Q6ZUA9 1318 aa11.58□□□□□ -0.56
UBBP4-201ENST00000583708 EYA2O00167 538 aa11.57□□□□□ -0.56
UBBP4-201ENST00000583708 IL15P40933 162 aaPredicted RBP11.57□□□□□ -0.56
UBBP4-201ENST00000583708 RFX5P48382 616 aaPredicted RBP11.57□□□□□ -0.56
UBBP4-201ENST00000583708 PTPN12Q05209 780 aaKnown RBP11.57□□□□□ -0.56
UBBP4-201ENST00000583708 ERC1Q8IUD2 1116 aa11.57□□□□□ -0.56
UBBP4-201ENST00000583708 CELF1Q92879 486 aaKnown RBP11.57□□□□□ -0.56
UBBP4-201ENST00000583708 PSMD1Q99460 953 aa11.57□□□□□ -0.56
UBBP4-201ENST00000583708 SEC31BQ9NQW1 1179 aa11.57□□□□□ -0.56
UBBP4-201ENST00000583708 CNNM1Q9NRU3 951 aa11.57□□□□□ -0.56
UBBP4-201ENST00000583708 LEMD3Q9Y2U8 911 aa11.57□□□□□ -0.56
UBBP4-201ENST00000583708 SRCAPQ6ZRS2 3230 aa11.57□□□□□ -0.56
UBBP4-201ENST00000583708 ANKRD31Q8N7Z5 1873 aa11.57□□□□□ -0.56
UBBP4-201ENST00000583708 LTBP3Q9NS15 1303 aa11.57□□□□□ -0.56
UBBP4-201ENST00000583708 RAB11FIP3O75154 756 aa11.56□□□□□ -0.56
UBBP4-201ENST00000583708 ATP2B4P23634 1241 aa11.56□□□□□ -0.56
UBBP4-201ENST00000583708 G3BP1Q13283 466 aaKnown RBP eCLIP11.56□□□□□ -0.56
UBBP4-201ENST00000583708 DDX60Q8IY21 1712 aaKnown RBP11.56□□□□□ -0.56
UBBP4-201ENST00000583708 MPNDQ8N594 471 aa11.56□□□□□ -0.56
UBBP4-201ENST00000583708 RTFDC1Q9BY42 306 aaPredicted RBP11.56□□□□□ -0.56
UBBP4-201ENST00000583708 BCS1LQ9Y276 419 aa11.56□□□□□ -0.56
UBBP4-201ENST00000583708 RIPOR2Q9Y4F9 1068 aa11.56□□□□□ -0.56
UBBP4-201ENST00000583708 XDHP47989 1333 aa11.56□□□□□ -0.56
UBBP4-201ENST00000583708 MYH3P11055 1940 aa11.55□□□□□ -0.56
UBBP4-201ENST00000583708 HDAC1Q13547 482 aaPredicted RBP11.55□□□□□ -0.56
UBBP4-201ENST00000583708 GPR162Q16538 588 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms