RNA–Protein interactions for RNA: ENST00000583053.1

CCDC57-217, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC57, Length 188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-217ENST00000583053 PSMD1Q99460 953 aa17.42■□□□□ 0.38
CCDC57-217ENST00000583053 BCL2L13Q9BXK5 485 aa17.42■□□□□ 0.38
CCDC57-217ENST00000583053 PTPRCP08575 1304 aa17.42■□□□□ 0.38
CCDC57-217ENST00000583053 SNED1Q8TER0 1413 aa17.41■□□□□ 0.38
CCDC57-217ENST00000583053 SLC4A10Q6U841 1118 aa17.41■□□□□ 0.38
CCDC57-217ENST00000583053 UBE3BQ7Z3V4 1068 aa17.41■□□□□ 0.38
CCDC57-217ENST00000583053 SMC4Q9NTJ3 1288 aa17.41■□□□□ 0.38
CCDC57-217ENST00000583053 CTSWP56202 376 aa17.4■□□□□ 0.38
CCDC57-217ENST00000583053 CELF1Q92879 486 aaKnown RBP17.4■□□□□ 0.38
CCDC57-217ENST00000583053 ZNF277Q9NRM2 450 aaPredicted RBP17.4■□□□□ 0.38
CCDC57-217ENST00000583053 DDX60Q8IY21 1712 aaKnown RBP17.4■□□□□ 0.38
CCDC57-217ENST00000583053 IARSP41252 1262 aaKnown RBP17.39■□□□□ 0.37
CCDC57-217ENST00000583053 CASP7P55210 303 aa17.39■□□□□ 0.37
CCDC57-217ENST00000583053 RPS8P62241 208 aaKnown RBP17.39■□□□□ 0.37
CCDC57-217ENST00000583053 SLC51AQ86UW1 340 aa17.39■□□□□ 0.37
CCDC57-217ENST00000583053 SRCIN1Q9C0H9 1055 aa17.39■□□□□ 0.37
CCDC57-217ENST00000583053 KDM2BQ8NHM5 1336 aa17.39■□□□□ 0.37
CCDC57-217ENST00000583053 FER1L6Q2WGJ9 1857 aa17.39■□□□□ 0.37
CCDC57-217ENST00000583053 CACNA1FO60840 1977 aa17.39■□□□□ 0.37
CCDC57-217ENST00000583053 CACNA1SQ13698 1873 aa17.38■□□□□ 0.37
CCDC57-217ENST00000583053 GLTPD2A6NH11 291 aa17.38■□□□□ 0.37
CCDC57-217ENST00000583053 ALDH1L1O75891 902 aa17.38■□□□□ 0.37
CCDC57-217ENST00000583053 TTLL11Q8NHH1 800 aa17.38■□□□□ 0.37
CCDC57-217ENST00000583053 CCDC85AQ96PX6 553 aaPredicted RBP17.38■□□□□ 0.37
CCDC57-217ENST00000583053 PLA2G12BQ9BX93 195 aa17.38■□□□□ 0.37
CCDC57-217ENST00000583053 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
CCDC57-217ENST00000583053 ZBED9Q6R2W3 1325 aa17.38■□□□□ 0.37
CCDC57-217ENST00000583053 RARSP54136 660 aaKnown RBP17.37■□□□□ 0.37
CCDC57-217ENST00000583053 BRPF1P55201 1214 aaPredicted RBP17.37■□□□□ 0.37
CCDC57-217ENST00000583053 DPY19L2Q6NUT2 758 aa17.37■□□□□ 0.37
CCDC57-217ENST00000583053 DPP8Q6V1X1 898 aaPredicted RBP17.37■□□□□ 0.37
CCDC57-217ENST00000583053 MPNDQ8N594 471 aa17.37■□□□□ 0.37
CCDC57-217ENST00000583053 LAMB2P55268 1798 aa17.37■□□□□ 0.37
CCDC57-217ENST00000583053 SBF1O95248 1867 aa17.36■□□□□ 0.37
CCDC57-217ENST00000583053 GRM8O00222 908 aa17.36■□□□□ 0.37
CCDC57-217ENST00000583053 SUPT20HQ8NEM7 779 aa17.36■□□□□ 0.37
CCDC57-217ENST00000583053 RTFDC1Q9BY42 306 aaPredicted RBP17.36■□□□□ 0.37
CCDC57-217ENST00000583053 VPS33BQ9H267 617 aa17.36■□□□□ 0.37
CCDC57-217ENST00000583053 C9orf78Q9NZ63 289 aaPredicted RBP17.36■□□□□ 0.37
CCDC57-217ENST00000583053 CSF1RP07333 972 aa17.35■□□□□ 0.37
CCDC57-217ENST00000583053 ANKRD18AQ8IVF6 992 aa17.35■□□□□ 0.37
CCDC57-217ENST00000583053 JDP2Q8WYK2 163 aa17.35■□□□□ 0.37
CCDC57-217ENST00000583053 CDC5LQ99459 802 aaKnown RBP17.35■□□□□ 0.37
CCDC57-217ENST00000583053 GREM2Q9H772 168 aa17.35■□□□□ 0.37
CCDC57-217ENST00000583053 NOB1Q9ULX3 412 aaKnown RBP17.35■□□□□ 0.37
CCDC57-217ENST00000583053 KIF3CO14782 793 aa17.34■□□□□ 0.37
CCDC57-217ENST00000583053 RTL9Q8NET4 1388 aa17.34■□□□□ 0.37
CCDC57-217ENST00000583053 NMRK2Q9NPI5 230 aa17.34■□□□□ 0.37
CCDC57-217ENST00000583053 NSFL1CQ9UNZ2 370 aaKnown RBP17.34■□□□□ 0.37
CCDC57-217ENST00000583053 FZD9O00144 591 aa17.33■□□□□ 0.36
CCDC57-217ENST00000583053 FOXO4P98177 505 aa17.33■□□□□ 0.36
CCDC57-217ENST00000583053 LARGE2Q8N3Y3 721 aa17.33■□□□□ 0.36
CCDC57-217ENST00000583053 RRAGCQ9HB90 399 aa17.33■□□□□ 0.36
CCDC57-217ENST00000583053 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
CCDC57-217ENST00000583053 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
CCDC57-217ENST00000583053 ITGA6P23229 1130 aa17.32■□□□□ 0.36
CCDC57-217ENST00000583053 AOC3Q16853 763 aa17.32■□□□□ 0.36
CCDC57-217ENST00000583053 API5Q9BZZ5 524 aaKnown RBP17.32■□□□□ 0.36
CCDC57-217ENST00000583053 UTYO14607 1347 aa17.31■□□□□ 0.36
CCDC57-217ENST00000583053 DDNO94850 711 aaPredicted RBP17.31■□□□□ 0.36
CCDC57-217ENST00000583053 C1QTNF8P60827 252 aa17.31■□□□□ 0.36
CCDC57-217ENST00000583053 GPSM2P81274 684 aa17.31■□□□□ 0.36
CCDC57-217ENST00000583053 KIAA2012Q0VF49 1180 aa17.31■□□□□ 0.36
CCDC57-217ENST00000583053 ARHGAP45Q92619 1136 aa17.31■□□□□ 0.36
CCDC57-217ENST00000583053 BSDC1Q9NW68 430 aaPredicted RBP17.31■□□□□ 0.36
CCDC57-217ENST00000583053 PODXL2Q9NZ53 605 aa17.31■□□□□ 0.36
CCDC57-217ENST00000583053 COL4A1P02462 1669 aa17.31■□□□□ 0.36
CCDC57-217ENST00000583053 NBPF7P0C2Y1 421 aaPredicted RBP17.3■□□□□ 0.36
CCDC57-217ENST00000583053 VEGFAP15692 232 aaPredicted RBP17.3■□□□□ 0.36
CCDC57-217ENST00000583053 FAM161AQ3B820 660 aa17.3■□□□□ 0.36
CCDC57-217ENST00000583053 NIM1KQ8IY84 436 aa17.3■□□□□ 0.36
CCDC57-217ENST00000583053 TIAM2Q8IVF5 1701 aa17.3■□□□□ 0.36
CCDC57-217ENST00000583053 C6orf229H3BNL8 230 aa17.29■□□□□ 0.36
CCDC57-217ENST00000583053 BCAR3O75815 825 aa17.29■□□□□ 0.36
CCDC57-217ENST00000583053 IGHMBP2P38935 993 aaKnown RBP17.29■□□□□ 0.36
CCDC57-217ENST00000583053 CCT4P50991 539 aaKnown RBP17.29■□□□□ 0.36
CCDC57-217ENST00000583053 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
CCDC57-217ENST00000583053 EPHA10Q5JZY3 1008 aa17.29■□□□□ 0.36
CCDC57-217ENST00000583053 LMBR1LQ6UX01 489 aa17.29■□□□□ 0.36
CCDC57-217ENST00000583053 TBC1D16Q8TBP0 767 aa17.29■□□□□ 0.36
CCDC57-217ENST00000583053 ANKIB1Q9P2G1 1089 aa17.29■□□□□ 0.36
CCDC57-217ENST00000583053 POLLQ9UGP5 575 aa17.29■□□□□ 0.36
CCDC57-217ENST00000583053 ZNF541Q9H0D2 1346 aa17.28■□□□□ 0.36
CCDC57-217ENST00000583053 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
CCDC57-217ENST00000583053 IPO8O15397 1037 aaKnown RBP17.28■□□□□ 0.36
CCDC57-217ENST00000583053 TOMM70O94826 608 aa17.28■□□□□ 0.36
CCDC57-217ENST00000583053 IFIT5Q13325 482 aaKnown RBP17.28■□□□□ 0.36
CCDC57-217ENST00000583053 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
CCDC57-217ENST00000583053 C16orf71Q8IYS4 520 aaPredicted RBP17.28■□□□□ 0.36
CCDC57-217ENST00000583053 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
CCDC57-217ENST00000583053 EYA3Q99504 573 aa17.28■□□□□ 0.36
CCDC57-217ENST00000583053 MPHOSPH8Q99549 860 aa17.28■□□□□ 0.36
CCDC57-217ENST00000583053 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
CCDC57-217ENST00000583053 MINPP1Q9UNW1 487 aa17.28■□□□□ 0.36
CCDC57-217ENST00000583053 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
CCDC57-217ENST00000583053 LRRC37AA6NMS7 1700 aa17.27■□□□□ 0.36
CCDC57-217ENST00000583053 XDHP47989 1333 aa17.27■□□□□ 0.36
CCDC57-217ENST00000583053 TAF1P21675 1872 aa17.27■□□□□ 0.36
CCDC57-217ENST00000583053 POTECB2RU33 542 aa17.27■□□□□ 0.36
CCDC57-217ENST00000583053 CCDC57Q2TAC2 916 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms