RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 PRKCSHP14314 528 aaPredicted RBP18.83■□□□□ 0.6
ERBB2-214ENST00000583038 CCDC40Q4G0X9 1142 aa18.83■□□□□ 0.6
ERBB2-214ENST00000583038 RBM8AQ9Y5S9 174 aaKnown RBP18.83■□□□□ 0.6
ERBB2-214ENST00000583038 ZFYVE9O95405 1425 aa18.82■□□□□ 0.6
ERBB2-214ENST00000583038 COPS6Q7L5N1 327 aa18.82■□□□□ 0.6
ERBB2-214ENST00000583038 SYKP43405 635 aa18.82■□□□□ 0.6
ERBB2-214ENST00000583038 TAOK3Q9H2K8 898 aa18.82■□□□□ 0.6
ERBB2-214ENST00000583038 EIF2AK4Q9P2K8 1649 aaKnown RBP18.82■□□□□ 0.6
ERBB2-214ENST00000583038 DCTPP1Q9H773 170 aa18.82■□□□□ 0.6
ERBB2-214ENST00000583038 ZNF518AQ6AHZ1 1483 aa18.82■□□□□ 0.6
ERBB2-214ENST00000583038 CCDC91Q7Z6B0 441 aa18.82■□□□□ 0.6
ERBB2-214ENST00000583038 PRIMPOLQ96LW4 560 aa18.82■□□□□ 0.6
ERBB2-214ENST00000583038 TEX14Q8IWB6 1497 aa18.82■□□□□ 0.6
ERBB2-214ENST00000583038 MSH6P52701 1360 aa18.81■□□□□ 0.6
ERBB2-214ENST00000583038 POLKQ9UBT6 870 aa18.81■□□□□ 0.6
ERBB2-214ENST00000583038 SMARCC1Q92922 1105 aaPredicted RBP18.81■□□□□ 0.6
ERBB2-214ENST00000583038 BIN1O00499 593 aa18.81■□□□□ 0.6
ERBB2-214ENST00000583038 CTAGE1Q96RT6 745 aa18.81■□□□□ 0.6
ERBB2-214ENST00000583038 EIF4A2Q14240 407 aaKnown RBP18.81■□□□□ 0.6
ERBB2-214ENST00000583038 PAXBP1Q9Y5B6 917 aa18.81■□□□□ 0.6
ERBB2-214ENST00000583038 C8orf58Q8NAV2 365 aa18.8■□□□□ 0.6
ERBB2-214ENST00000583038 CPLX3Q8WVH0 158 aa18.8■□□□□ 0.6
ERBB2-214ENST00000583038 ANXA1P04083 346 aa18.8■□□□□ 0.6
ERBB2-214ENST00000583038 C16orf45Q96MC5 204 aaPredicted RBP18.8■□□□□ 0.6
ERBB2-214ENST00000583038 LARP6Q9BRS8 491 aaKnown RBP18.8■□□□□ 0.6
ERBB2-214ENST00000583038 TUBB4AP04350 444 aa18.8■□□□□ 0.6
ERBB2-214ENST00000583038 SNW1Q13573 536 aaKnown RBP18.8■□□□□ 0.6
ERBB2-214ENST00000583038 FAM200AQ8TCP9 573 aa18.8■□□□□ 0.6
ERBB2-214ENST00000583038 MRPS27Q92552 414 aaKnown RBP18.8■□□□□ 0.6
ERBB2-214ENST00000583038 INCENPQ9NQS7 918 aa18.8■□□□□ 0.6
ERBB2-214ENST00000583038 CCDC171Q6TFL3 1326 aa18.8■□□□□ 0.6
ERBB2-214ENST00000583038 LMBR1LQ6UX01 489 aa18.79■□□□□ 0.6
ERBB2-214ENST00000583038 ERMNQ8TAM6 284 aa18.79■□□□□ 0.6
ERBB2-214ENST00000583038 DYDC1Q8WWB3 177 aa18.79■□□□□ 0.6
ERBB2-214ENST00000583038 CCDC172P0C7W6 258 aa18.79■□□□□ 0.6
ERBB2-214ENST00000583038 ZSCAN23Q3MJ62 389 aa18.79■□□□□ 0.6
ERBB2-214ENST00000583038 TSHZ3Q63HK5 1081 aa18.79■□□□□ 0.6
ERBB2-214ENST00000583038 RAD50Q92878 1312 aa18.79■□□□□ 0.6
ERBB2-214ENST00000583038 GTPBP4Q9BZE4 634 aaKnown RBP18.79■□□□□ 0.6
ERBB2-214ENST00000583038 RIMS2Q9UQ26 1411 aa18.79■□□□□ 0.6
ERBB2-214ENST00000583038 GCOM1H8Y6P7 765 aaPredicted RBP18.79■□□□□ 0.6
ERBB2-214ENST00000583038 MYZAPP0CAP1 466 aa18.79■□□□□ 0.6
ERBB2-214ENST00000583038 SMC5Q8IY18 1101 aa18.79■□□□□ 0.6
ERBB2-214ENST00000583038 GSTTP1A0A1W2PQM5 241 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 IFI16Q16666 785 aaKnown RBP18.78■□□□□ 0.6
ERBB2-214ENST00000583038 FEZ1Q99689 392 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 ALG1Q9BT22 464 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 PTPRKQ15262 1439 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 N4BP3O15049 544 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 IFFO1Q0D2I5 559 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 SCLT1Q96NL6 688 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 TRMT1Q9NXH9 659 aaKnown RBP18.78■□□□□ 0.6
ERBB2-214ENST00000583038 VAMP4O75379 141 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 HCLS1P14317 486 aaPredicted RBP18.78■□□□□ 0.6
ERBB2-214ENST00000583038 RTN1Q16799 776 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 NBPF6Q5VWK0 638 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 NBPF5PQ86XG9 351 aaPredicted RBP18.78■□□□□ 0.6
ERBB2-214ENST00000583038 NBPF4Q96M43 638 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 FAM107BQ9H098 131 aa18.78■□□□□ 0.6
ERBB2-214ENST00000583038 GNAT2P19087 354 aa18.77■□□□□ 0.6
ERBB2-214ENST00000583038 RFC4P35249 363 aa18.77■□□□□ 0.6
ERBB2-214ENST00000583038 HOOK3Q86VS8 718 aa18.77■□□□□ 0.6
ERBB2-214ENST00000583038 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.77■□□□□ 0.6
ERBB2-214ENST00000583038 NPATQ14207 1427 aa18.77■□□□□ 0.6
ERBB2-214ENST00000583038 MAPKBP1O60336 1514 aa18.77■□□□□ 0.6
ERBB2-214ENST00000583038 TCERG1LQ5VWI1 586 aa18.77■□□□□ 0.6
ERBB2-214ENST00000583038 TESK2Q96S53 571 aa18.77■□□□□ 0.6
ERBB2-214ENST00000583038 STX8Q9UNK0 236 aa18.77■□□□□ 0.6
ERBB2-214ENST00000583038 CHRNA2Q15822 529 aa18.77■□□□□ 0.59
ERBB2-214ENST00000583038 INTS4Q96HW7 963 aaKnown RBP18.77■□□□□ 0.59
ERBB2-214ENST00000583038 NLRP3Q96P20 1036 aa18.77■□□□□ 0.59
ERBB2-214ENST00000583038 ARHGEF12Q9NZN5 1544 aa18.77■□□□□ 0.59
ERBB2-214ENST00000583038 CALM1P0DP23 149 aa18.76■□□□□ 0.59
ERBB2-214ENST00000583038 CALM2P0DP24 149 aa18.76■□□□□ 0.59
ERBB2-214ENST00000583038 CALM3P0DP25 149 aa18.76■□□□□ 0.59
ERBB2-214ENST00000583038 CYP7A1P22680 504 aa18.76■□□□□ 0.59
ERBB2-214ENST00000583038 NUP153P49790 1475 aaKnown RBP18.76■□□□□ 0.59
ERBB2-214ENST00000583038 TRIM47Q96LD4 638 aa18.76■□□□□ 0.59
ERBB2-214ENST00000583038 ST5P78524 1137 aa18.76■□□□□ 0.59
ERBB2-214ENST00000583038 SMC1AQ14683 1233 aaKnown RBP18.76■□□□□ 0.59
ERBB2-214ENST00000583038 CCDC144CPQ8IYA2 1237 aa18.76■□□□□ 0.59
ERBB2-214ENST00000583038 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.76■□□□□ 0.59
ERBB2-214ENST00000583038 F13A1P00488 732 aa18.76■□□□□ 0.59
ERBB2-214ENST00000583038 MAP2K1Q02750 393 aaPredicted RBP18.76■□□□□ 0.59
ERBB2-214ENST00000583038 EXOC1Q9NV70 894 aa18.76■□□□□ 0.59
ERBB2-214ENST00000583038 TCOF1Q13428 1488 aaKnown RBP18.76■□□□□ 0.59
ERBB2-214ENST00000583038 IFIT1BQ5T764 474 aaKnown RBP18.75■□□□□ 0.59
ERBB2-214ENST00000583038 BABAM1Q9NWV8 329 aa18.75■□□□□ 0.59
ERBB2-214ENST00000583038 USP37Q86T82 979 aa18.75■□□□□ 0.59
ERBB2-214ENST00000583038 TBCAO75347 108 aaKnown RBP18.75■□□□□ 0.59
ERBB2-214ENST00000583038 CALML3P27482 149 aa18.75■□□□□ 0.59
ERBB2-214ENST00000583038 NECAB1Q8N987 351 aa18.75■□□□□ 0.59
ERBB2-214ENST00000583038 AKR1B10O60218 316 aa18.75■□□□□ 0.59
ERBB2-214ENST00000583038 SPECC1Q5M775 1068 aa18.75■□□□□ 0.59
ERBB2-214ENST00000583038 MICALCLQ6ZW33 695 aa18.75■□□□□ 0.59
ERBB2-214ENST00000583038 PANK2Q9BZ23 570 aa18.75■□□□□ 0.59
ERBB2-214ENST00000583038 ZBTB40Q9NUA8 1239 aa18.75■□□□□ 0.59
ERBB2-214ENST00000583038 ABCC10Q5T3U5 1492 aa18.74■□□□□ 0.59
ERBB2-214ENST00000583038 CEP85Q6P2H3 762 aa18.74■□□□□ 0.59
ERBB2-214ENST00000583038 DYNC1I1O14576 645 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms