RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SF3B3Q15393 1217 aaKnown RBP16.03■□□□□ 0.16
SMARCE1-218ENST00000582955 CC2D2BQ6DHV5 1058 aa16.03■□□□□ 0.16
SMARCE1-218ENST00000582955 GRAPLQ8TC17 118 aaPredicted RBP16.03■□□□□ 0.16
SMARCE1-218ENST00000582955 SSH1Q8WYL5 1049 aa16.03■□□□□ 0.16
SMARCE1-218ENST00000582955 CCDC88AQ3V6T2 1871 aa16.03■□□□□ 0.16
SMARCE1-218ENST00000582955 CDHR2Q9BYE9 1310 aa16.02■□□□□ 0.16
SMARCE1-218ENST00000582955 BBOX1O75936 387 aa16.02■□□□□ 0.16
SMARCE1-218ENST00000582955 CT47B1P0C2W7 299 aaPredicted RBP16.02■□□□□ 0.16
SMARCE1-218ENST00000582955 GCKRQ14397 625 aa16.02■□□□□ 0.16
SMARCE1-218ENST00000582955 SLC4A10Q6U841 1118 aa16.02■□□□□ 0.16
SMARCE1-218ENST00000582955 UBE3BQ7Z3V4 1068 aa16.02■□□□□ 0.16
SMARCE1-218ENST00000582955 SLC51AQ86UW1 340 aa16.02■□□□□ 0.16
SMARCE1-218ENST00000582955 SMC4Q9NTJ3 1288 aa16.02■□□□□ 0.16
SMARCE1-218ENST00000582955 ATP6V0A2Q9Y487 856 aa16.02■□□□□ 0.16
SMARCE1-218ENST00000582955 ALDH1L2Q3SY69 923 aa16.01■□□□□ 0.15
SMARCE1-218ENST00000582955 CCDC152Q4G0S7 254 aa16.01■□□□□ 0.15
SMARCE1-218ENST00000582955 CCDC85AQ96PX6 553 aaPredicted RBP16.01■□□□□ 0.15
SMARCE1-218ENST00000582955 ZNF277Q9NRM2 450 aaPredicted RBP16.01■□□□□ 0.15
SMARCE1-218ENST00000582955 TIAM2Q8IVF5 1701 aa16.01■□□□□ 0.15
SMARCE1-218ENST00000582955 ZC3H4Q9UPT8 1303 aaKnown RBP16■□□□□ 0.15
SMARCE1-218ENST00000582955 GRIPAP1Q4V328 841 aa16■□□□□ 0.15
SMARCE1-218ENST00000582955 BEND3Q5T5X7 828 aa16■□□□□ 0.15
SMARCE1-218ENST00000582955 CELF1Q92879 486 aaKnown RBP16■□□□□ 0.15
SMARCE1-218ENST00000582955 TAF1P21675 1872 aa15.99■□□□□ 0.15
SMARCE1-218ENST00000582955 PTPRCP08575 1304 aa15.99■□□□□ 0.15
SMARCE1-218ENST00000582955 KDM2BQ8NHM5 1336 aa15.99■□□□□ 0.15
SMARCE1-218ENST00000582955 H7C1W4 665 aa15.99■□□□□ 0.15
SMARCE1-218ENST00000582955 CTSWP56202 376 aa15.99■□□□□ 0.15
SMARCE1-218ENST00000582955 SP8Q8IXZ3 490 aa15.99■□□□□ 0.15
SMARCE1-218ENST00000582955 PSMD1Q99460 953 aa15.99■□□□□ 0.15
SMARCE1-218ENST00000582955 SEC31BQ9NQW1 1179 aa15.99■□□□□ 0.15
SMARCE1-218ENST00000582955 SNED1Q8TER0 1413 aa15.99■□□□□ 0.15
SMARCE1-218ENST00000582955 IARSP41252 1262 aaKnown RBP15.98■□□□□ 0.15
SMARCE1-218ENST00000582955 TMC4Q7Z404 712 aa15.98■□□□□ 0.15
SMARCE1-218ENST00000582955 SRCIN1Q9C0H9 1055 aa15.98■□□□□ 0.15
SMARCE1-218ENST00000582955 DICER1Q9UPY3 1922 aaKnown RBP15.98■□□□□ 0.15
SMARCE1-218ENST00000582955 RPS8P62241 208 aaKnown RBP15.97■□□□□ 0.15
SMARCE1-218ENST00000582955 DPP8Q6V1X1 898 aaPredicted RBP15.97■□□□□ 0.15
SMARCE1-218ENST00000582955 MPNDQ8N594 471 aa15.97■□□□□ 0.15
SMARCE1-218ENST00000582955 ZBED9Q6R2W3 1325 aa15.96■□□□□ 0.15
SMARCE1-218ENST00000582955 ALDH1L1O75891 902 aa15.96■□□□□ 0.15
SMARCE1-218ENST00000582955 CASP7P55210 303 aa15.96■□□□□ 0.15
SMARCE1-218ENST00000582955 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.15
SMARCE1-218ENST00000582955 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.15
SMARCE1-218ENST00000582955 NMRK2Q9NPI5 230 aa15.96■□□□□ 0.15
SMARCE1-218ENST00000582955 C9orf78Q9NZ63 289 aaPredicted RBP15.96■□□□□ 0.15
SMARCE1-218ENST00000582955 MYH3P11055 1940 aa15.96■□□□□ 0.14
SMARCE1-218ENST00000582955 COL4A1P02462 1669 aa15.95■□□□□ 0.14
SMARCE1-218ENST00000582955 GLTPD2A6NH11 291 aa15.95■□□□□ 0.14
SMARCE1-218ENST00000582955 GRM8O00222 908 aa15.95■□□□□ 0.14
SMARCE1-218ENST00000582955 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
SMARCE1-218ENST00000582955 ANKRD18AQ8IVF6 992 aa15.95■□□□□ 0.14
SMARCE1-218ENST00000582955 LARGE2Q8N3Y3 721 aa15.95■□□□□ 0.14
SMARCE1-218ENST00000582955 SUPT20HQ8NEM7 779 aa15.95■□□□□ 0.14
SMARCE1-218ENST00000582955 CDC5LQ99459 802 aaKnown RBP15.95■□□□□ 0.14
SMARCE1-218ENST00000582955 GREM2Q9H772 168 aa15.95■□□□□ 0.14
SMARCE1-218ENST00000582955 PPIP5K2O43314 1243 aa15.94■□□□□ 0.14
SMARCE1-218ENST00000582955 JDP2Q8WYK2 163 aa15.94■□□□□ 0.14
SMARCE1-218ENST00000582955 PLA2G12BQ9BX93 195 aa15.94■□□□□ 0.14
SMARCE1-218ENST00000582955 NOB1Q9ULX3 412 aaKnown RBP15.94■□□□□ 0.14
SMARCE1-218ENST00000582955 NSFL1CQ9UNZ2 370 aaKnown RBP15.94■□□□□ 0.14
SMARCE1-218ENST00000582955 LRRC37AA6NMS7 1700 aa15.94■□□□□ 0.14
SMARCE1-218ENST00000582955 KIF3CO14782 793 aa15.93■□□□□ 0.14
SMARCE1-218ENST00000582955 AOC3Q16853 763 aa15.93■□□□□ 0.14
SMARCE1-218ENST00000582955 RRAGCQ9HB90 399 aa15.93■□□□□ 0.14
SMARCE1-218ENST00000582955 KIF16BQ96L93 1317 aa15.93■□□□□ 0.14
SMARCE1-218ENST00000582955 RTL9Q8NET4 1388 aa15.92■□□□□ 0.14
SMARCE1-218ENST00000582955 GPSM2P81274 684 aa15.92■□□□□ 0.14
SMARCE1-218ENST00000582955 FAM161AQ3B820 660 aa15.92■□□□□ 0.14
SMARCE1-218ENST00000582955 RTFDC1Q9BY42 306 aaPredicted RBP15.92■□□□□ 0.14
SMARCE1-218ENST00000582955 CHMP3Q9Y3E7 222 aa15.92■□□□□ 0.14
SMARCE1-218ENST00000582955 C6orf229H3BNL8 230 aa15.91■□□□□ 0.14
SMARCE1-218ENST00000582955 DDNO94850 711 aaPredicted RBP15.91■□□□□ 0.14
SMARCE1-218ENST00000582955 CSF1RP07333 972 aa15.91■□□□□ 0.14
SMARCE1-218ENST00000582955 ITGA6P23229 1130 aa15.91■□□□□ 0.14
SMARCE1-218ENST00000582955 BRPF1P55201 1214 aaPredicted RBP15.91■□□□□ 0.14
SMARCE1-218ENST00000582955 NIM1KQ8IY84 436 aa15.91■□□□□ 0.14
SMARCE1-218ENST00000582955 C16orf71Q8IYS4 520 aaPredicted RBP15.91■□□□□ 0.14
SMARCE1-218ENST00000582955 API5Q9BZZ5 524 aaKnown RBP15.91■□□□□ 0.14
SMARCE1-218ENST00000582955 ANKIB1Q9P2G1 1089 aa15.91■□□□□ 0.14
SMARCE1-218ENST00000582955 ZNF541Q9H0D2 1346 aa15.91■□□□□ 0.14
SMARCE1-218ENST00000582955 COL4A5P29400 1685 aa15.9■□□□□ 0.14
SMARCE1-218ENST00000582955 FZD9O00144 591 aa15.9■□□□□ 0.14
SMARCE1-218ENST00000582955 IGHMBP2P38935 993 aaKnown RBP15.9■□□□□ 0.14
SMARCE1-218ENST00000582955 EIF6P56537 245 aaKnown RBP15.9■□□□□ 0.14
SMARCE1-218ENST00000582955 C1QTNF8P60827 252 aa15.9■□□□□ 0.14
SMARCE1-218ENST00000582955 FOXO4P98177 505 aa15.9■□□□□ 0.14
SMARCE1-218ENST00000582955 VPS33BQ9H267 617 aa15.9■□□□□ 0.14
SMARCE1-218ENST00000582955 DUOX1Q9NRD9 1551 aa15.9■□□□□ 0.14
SMARCE1-218ENST00000582955 SPEF2Q9C093 1822 aa15.89■□□□□ 0.13
SMARCE1-218ENST00000582955 ANKRD18BA2A2Z9 1011 aa15.89■□□□□ 0.13
SMARCE1-218ENST00000582955 NBPF7P0C2Y1 421 aaPredicted RBP15.89■□□□□ 0.13
SMARCE1-218ENST00000582955 VEGFAP15692 232 aaPredicted RBP15.89■□□□□ 0.13
SMARCE1-218ENST00000582955 CCT4P50991 539 aaKnown RBP15.89■□□□□ 0.13
SMARCE1-218ENST00000582955 KIAA2012Q0VF49 1180 aa15.89■□□□□ 0.13
SMARCE1-218ENST00000582955 EPHA10Q5JZY3 1008 aa15.89■□□□□ 0.13
SMARCE1-218ENST00000582955 LMBR1LQ6UX01 489 aa15.89■□□□□ 0.13
SMARCE1-218ENST00000582955 FRAT1Q92837 279 aaPredicted RBP15.89■□□□□ 0.13
SMARCE1-218ENST00000582955 SUCLG2Q96I99 432 aa15.89■□□□□ 0.13
SMARCE1-218ENST00000582955 RIMBP2O15034 1052 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms