RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 PDE8AO60658 829 aa17.82■□□□□ 0.44
GGA3-215ENST00000582821 CWF19L2Q2TBE0 894 aaKnown RBP17.82■□□□□ 0.44
GGA3-215ENST00000582821 LINS1Q8NG48 757 aa17.82■□□□□ 0.44
GGA3-215ENST00000582821 TMX4Q9H1E5 349 aaPredicted RBP17.82■□□□□ 0.44
GGA3-215ENST00000582821 C1QTNF8P60827 252 aa17.81■□□□□ 0.44
GGA3-215ENST00000582821 GCKRQ14397 625 aa17.81■□□□□ 0.44
GGA3-215ENST00000582821 DPY19L2Q6NUT2 758 aa17.81■□□□□ 0.44
GGA3-215ENST00000582821 VPS33BQ9H267 617 aa17.81■□□□□ 0.44
GGA3-215ENST00000582821 ZNF277Q9NRM2 450 aaPredicted RBP17.81■□□□□ 0.44
GGA3-215ENST00000582821 TIAM2Q8IVF5 1701 aa17.81■□□□□ 0.44
GGA3-215ENST00000582821 CT47B1P0C2W7 299 aaPredicted RBP17.8■□□□□ 0.44
GGA3-215ENST00000582821 IARSP41252 1262 aaKnown RBP17.8■□□□□ 0.44
GGA3-215ENST00000582821 MRPL50Q8N5N7 158 aaKnown RBP17.8■□□□□ 0.44
GGA3-215ENST00000582821 RTFDC1Q9BY42 306 aaPredicted RBP17.8■□□□□ 0.44
GGA3-215ENST00000582821 NMRK2Q9NPI5 230 aa17.8■□□□□ 0.44
GGA3-215ENST00000582821 RPS8P62241 208 aaKnown RBP17.79■□□□□ 0.44
GGA3-215ENST00000582821 BEND3Q5T5X7 828 aa17.79■□□□□ 0.44
GGA3-215ENST00000582821 JARID2Q92833 1246 aaPredicted RBP17.79■□□□□ 0.44
GGA3-215ENST00000582821 PLA2G12BQ9BX93 195 aa17.79■□□□□ 0.44
GGA3-215ENST00000582821 MYH3P11055 1940 aa17.78■□□□□ 0.44
GGA3-215ENST00000582821 CASP7P55210 303 aa17.78■□□□□ 0.44
GGA3-215ENST00000582821 ALDH1L2Q3SY69 923 aa17.78■□□□□ 0.44
GGA3-215ENST00000582821 CCDC152Q4G0S7 254 aa17.78■□□□□ 0.44
GGA3-215ENST00000582821 CELF1Q92879 486 aaKnown RBP17.78■□□□□ 0.44
GGA3-215ENST00000582821 F6X3S4 739 aa17.77■□□□□ 0.44
GGA3-215ENST00000582821 FZD9O00144 591 aa17.77■□□□□ 0.44
GGA3-215ENST00000582821 SLC51AQ86UW1 340 aa17.77■□□□□ 0.44
GGA3-215ENST00000582821 MPNDQ8N594 471 aa17.77■□□□□ 0.44
GGA3-215ENST00000582821 SUPT20HQ8NEM7 779 aa17.77■□□□□ 0.44
GGA3-215ENST00000582821 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
GGA3-215ENST00000582821 RRAGCQ9HB90 399 aa17.77■□□□□ 0.44
GGA3-215ENST00000582821 TOMM70O94826 608 aa17.76■□□□□ 0.43
GGA3-215ENST00000582821 UBE3BQ7Z3V4 1068 aa17.76■□□□□ 0.43
GGA3-215ENST00000582821 TTLL11Q8NHH1 800 aa17.76■□□□□ 0.43
GGA3-215ENST00000582821 LRRC37AA6NMS7 1700 aa17.75■□□□□ 0.43
GGA3-215ENST00000582821 PTPRCP08575 1304 aa17.75■□□□□ 0.43
GGA3-215ENST00000582821 ALDH1L1O75891 902 aa17.75■□□□□ 0.43
GGA3-215ENST00000582821 VEGFAP15692 232 aaPredicted RBP17.75■□□□□ 0.43
GGA3-215ENST00000582821 CTSWP56202 376 aa17.75■□□□□ 0.43
GGA3-215ENST00000582821 DPP8Q6V1X1 898 aaPredicted RBP17.75■□□□□ 0.43
GGA3-215ENST00000582821 JDP2Q8WYK2 163 aa17.75■□□□□ 0.43
GGA3-215ENST00000582821 SEC31BQ9NQW1 1179 aa17.75■□□□□ 0.43
GGA3-215ENST00000582821 WDR90Q96KV7 1748 aa17.75■□□□□ 0.43
GGA3-215ENST00000582821 POTECB2RU33 542 aa17.74■□□□□ 0.43
GGA3-215ENST00000582821 BRPF1P55201 1214 aaPredicted RBP17.74■□□□□ 0.43
GGA3-215ENST00000582821 RTL9Q8NET4 1388 aa17.74■□□□□ 0.43
GGA3-215ENST00000582821 DDNO94850 711 aaPredicted RBP17.73■□□□□ 0.43
GGA3-215ENST00000582821 CSF1RP07333 972 aa17.73■□□□□ 0.43
GGA3-215ENST00000582821 LARGE2Q8N3Y3 721 aa17.73■□□□□ 0.43
GGA3-215ENST00000582821 L3MBTL3Q96JM7 780 aaPredicted RBP17.73■□□□□ 0.43
GGA3-215ENST00000582821 COL4A1P02462 1669 aa17.73■□□□□ 0.43
GGA3-215ENST00000582821 RBM46Q8TBY0 533 aaKnown RBP17.72■□□□□ 0.43
GGA3-215ENST00000582821 CDC5LQ99459 802 aaKnown RBP17.72■□□□□ 0.43
GGA3-215ENST00000582821 SRCIN1Q9C0H9 1055 aa17.72■□□□□ 0.43
GGA3-215ENST00000582821 PODXL2Q9NZ53 605 aa17.72■□□□□ 0.43
GGA3-215ENST00000582821 GRM8O00222 908 aa17.71■□□□□ 0.43
GGA3-215ENST00000582821 PPIP5K2O43314 1243 aa17.71■□□□□ 0.43
GGA3-215ENST00000582821 HNRNPUQ00839 825 aaKnown RBP eCLIP17.71■□□□□ 0.43
GGA3-215ENST00000582821 KIAA2012Q0VF49 1180 aa17.71■□□□□ 0.43
GGA3-215ENST00000582821 ANKRD18AQ8IVF6 992 aa17.71■□□□□ 0.43
GGA3-215ENST00000582821 CCDC85AQ96PX6 553 aaPredicted RBP17.71■□□□□ 0.43
GGA3-215ENST00000582821 GREM2Q9H772 168 aa17.71■□□□□ 0.43
GGA3-215ENST00000582821 NSFL1CQ9UNZ2 370 aaKnown RBP17.71■□□□□ 0.43
GGA3-215ENST00000582821 ZNF541Q9H0D2 1346 aa17.71■□□□□ 0.42
GGA3-215ENST00000582821 COL4A5P29400 1685 aa17.71■□□□□ 0.42
GGA3-215ENST00000582821 EIF6P56537 245 aaKnown RBP17.7■□□□□ 0.42
GGA3-215ENST00000582821 GPSM2P81274 684 aa17.7■□□□□ 0.42
GGA3-215ENST00000582821 AOC3Q16853 763 aa17.7■□□□□ 0.42
GGA3-215ENST00000582821 SLC4A10Q6U841 1118 aa17.7■□□□□ 0.42
GGA3-215ENST00000582821 NIM1KQ8IY84 436 aa17.7■□□□□ 0.42
GGA3-215ENST00000582821 C16orf71Q8IYS4 520 aaPredicted RBP17.7■□□□□ 0.42
GGA3-215ENST00000582821 GPC2Q8N158 579 aa17.7■□□□□ 0.42
GGA3-215ENST00000582821 SMC4Q9NTJ3 1288 aa17.7■□□□□ 0.42
GGA3-215ENST00000582821 BSDC1Q9NW68 430 aaPredicted RBP17.7■□□□□ 0.42
GGA3-215ENST00000582821 SCN4AP35499 1836 aa17.7■□□□□ 0.42
GGA3-215ENST00000582821 RARSP54136 660 aaKnown RBP17.69■□□□□ 0.42
GGA3-215ENST00000582821 FOXO4P98177 505 aa17.69■□□□□ 0.42
GGA3-215ENST00000582821 BCL2L13Q9BXK5 485 aa17.69■□□□□ 0.42
GGA3-215ENST00000582821 C9orf78Q9NZ63 289 aaPredicted RBP17.69■□□□□ 0.42
GGA3-215ENST00000582821 POLLQ9UGP5 575 aa17.69■□□□□ 0.42
GGA3-215ENST00000582821 DUOX1Q9NRD9 1551 aa17.69■□□□□ 0.42
GGA3-215ENST00000582821 LTBP1Q14766 1721 aa17.69■□□□□ 0.42
GGA3-215ENST00000582821 UTYO14607 1347 aa17.69■□□□□ 0.42
GGA3-215ENST00000582821 IQCA1LA6NCM1 817 aa17.68■□□□□ 0.42
GGA3-215ENST00000582821 TBC1D16Q8TBP0 767 aa17.68■□□□□ 0.42
GGA3-215ENST00000582821 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
GGA3-215ENST00000582821 ITGA6P23229 1130 aa17.67■□□□□ 0.42
GGA3-215ENST00000582821 FSTL1Q12841 308 aa17.67■□□□□ 0.42
GGA3-215ENST00000582821 WASHC4Q2M389 1173 aa17.67■□□□□ 0.42
GGA3-215ENST00000582821 EYA3Q99504 573 aa17.67■□□□□ 0.42
GGA3-215ENST00000582821 C6orf229H3BNL8 230 aa17.66■□□□□ 0.42
GGA3-215ENST00000582821 ANKIB1Q9P2G1 1089 aa17.66■□□□□ 0.42
GGA3-215ENST00000582821 MINPP1Q9UNW1 487 aa17.66■□□□□ 0.42
GGA3-215ENST00000582821 IGHMBP2P38935 993 aaKnown RBP17.65■□□□□ 0.42
GGA3-215ENST00000582821 CXCL9Q07325 125 aa17.65■□□□□ 0.42
GGA3-215ENST00000582821 FAM161AQ3B820 660 aa17.65■□□□□ 0.42
GGA3-215ENST00000582821 ARHGAP45Q92619 1136 aa17.65■□□□□ 0.42
GGA3-215ENST00000582821 GGA1Q9UJY5 639 aa17.65■□□□□ 0.42
GGA3-215ENST00000582821 NOB1Q9ULX3 412 aaKnown RBP17.65■□□□□ 0.42
GGA3-215ENST00000582821 XDHP47989 1333 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms