RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	TRPM4	Q8TD43	1214 aa		7.45	□□□□□ -1.22
MSI2-216	ENST00000582772	ZBTB12	Q9Y330	459 aa	Predicted RBP	7.45	□□□□□ -1.22
MSI2-216	ENST00000582772	PTCH2	Q9Y6C5	1203 aa		7.45	□□□□□ -1.22
MSI2-216	ENST00000582772	ZNF318	Q5VUA4	2279 aa		7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	CAP1	Q01518	475 aa		7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	ACAP1	Q15027	740 aa		7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	PRR5L	Q6MZQ0	368 aa		7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	DLK2	Q6UY11	383 aa		7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	MYLIP	Q8WY64	445 aa		7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	SEMA6B	Q9H3T3	888 aa		7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	DMD	P11532	3685 aa		7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	SOS1	Q07889	1333 aa	Predicted RBP	7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	FAM205A	Q6ZU69	1335 aa		7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	TPR	P12270	2363 aa	Known RBP	7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	NCAPD2	Q15021	1401 aa		7.44	□□□□□ -1.22
MSI2-216	ENST00000582772	ASH1L	Q9NR48	2969 aa	Known RBP	7.43	□□□□□ -1.22
MSI2-216	ENST00000582772	FARP2	O94887	1054 aa	Predicted RBP	7.43	□□□□□ -1.22
MSI2-216	ENST00000582772	GJB1	P08034	283 aa		7.43	□□□□□ -1.22
MSI2-216	ENST00000582772	MAGEA10	P43363	369 aa	Predicted RBP	7.43	□□□□□ -1.22
MSI2-216	ENST00000582772	EPHX3	Q9H6B9	360 aa		7.43	□□□□□ -1.22
MSI2-216	ENST00000582772	THEG	Q9P2T0	379 aa		7.43	□□□□□ -1.22
MSI2-216	ENST00000582772	RTL1	A6NKG5	1358 aa		7.43	□□□□□ -1.22
MSI2-216	ENST00000582772	COL3A1	P02461	1466 aa	Predicted RBP	7.43	□□□□□ -1.22
MSI2-216	ENST00000582772	TCF20	Q9UGU0	1960 aa	Known RBP	7.42	□□□□□ -1.22
MSI2-216	ENST00000582772	GMPS	P49915	693 aa	Predicted RBP	7.42	□□□□□ -1.22
MSI2-216	ENST00000582772	MRPS5	P82675	430 aa	Known RBP	7.42	□□□□□ -1.22
MSI2-216	ENST00000582772	NBPF6	Q5VWK0	638 aa		7.42	□□□□□ -1.22
MSI2-216	ENST00000582772	INTS5	Q6P9B9	1019 aa	Known RBP	7.42	□□□□□ -1.22
MSI2-216	ENST00000582772	NBPF4	Q96M43	638 aa		7.42	□□□□□ -1.22
MSI2-216	ENST00000582772	UBE2O	Q9C0C9	1292 aa	Known RBP	7.42	□□□□□ -1.22
MSI2-216	ENST00000582772	COL15A1	P39059	1388 aa		7.42	□□□□□ -1.22
MSI2-216	ENST00000582772	NPC1L1	Q9UHC9	1359 aa		7.42	□□□□□ -1.22
MSI2-216	ENST00000582772	ZNF292	O60281	2723 aa		7.42	□□□□□ -1.22
MSI2-216	ENST00000582772	TAF1	P21675	1872 aa		7.41	□□□□□ -1.22
MSI2-216	ENST00000582772	KLRG2	A4D1S0	409 aa	Predicted RBP	7.41	□□□□□ -1.22
MSI2-216	ENST00000582772	ADM5	C9JUS6	153 aa		7.41	□□□□□ -1.22
MSI2-216	ENST00000582772	LTV1	Q96GA3	475 aa	Predicted RBP	7.41	□□□□□ -1.22
MSI2-216	ENST00000582772	KDM2A	Q9Y2K7	1162 aa		7.41	□□□□□ -1.22
MSI2-216	ENST00000582772	FAM208B	Q5VWN6	2430 aa		7.41	□□□□□ -1.22
MSI2-216	ENST00000582772	ACACB	O00763	2458 aa		7.41	□□□□□ -1.22
MSI2-216	ENST00000582772	ASPM	Q8IZT6	3477 aa		7.4	□□□□□ -1.22
MSI2-216	ENST00000582772	PRR33	A8MZF0	331 aa		7.4	□□□□□ -1.22
MSI2-216	ENST00000582772	SMIM22	K7EJ46	135 aa		7.4	□□□□□ -1.22
MSI2-216	ENST00000582772	HOXC9	P31274	260 aa		7.4	□□□□□ -1.22
MSI2-216	ENST00000582772	INHBE	P58166	350 aa		7.4	□□□□□ -1.22
MSI2-216	ENST00000582772	SP3	Q02447	781 aa		7.4	□□□□□ -1.22
MSI2-216	ENST00000582772	ARHGEF6	Q15052	776 aa		7.4	□□□□□ -1.22
MSI2-216	ENST00000582772	GRIPAP1	Q4V328	841 aa		7.4	□□□□□ -1.22
MSI2-216	ENST00000582772	RBM42	Q9BTD8	480 aa	Known RBP	7.4	□□□□□ -1.22
MSI2-216	ENST00000582772	SLC4A1AP	Q9BWU0	796 aa	Known RBP	7.4	□□□□□ -1.22
MSI2-216	ENST00000582772	FLNB	O75369	2602 aa	Known RBP	7.39	□□□□□ -1.23
MSI2-216	ENST00000582772	KTN1	Q86UP2	1357 aa	Known RBP	7.39	□□□□□ -1.23
MSI2-216	ENST00000582772	NPR1	P16066	1061 aa		7.39	□□□□□ -1.23
MSI2-216	ENST00000582772	CC2D2B	Q6DHV5	1058 aa		7.39	□□□□□ -1.23
MSI2-216	ENST00000582772	OLFM4	Q6UX06	510 aa		7.39	□□□□□ -1.23
MSI2-216	ENST00000582772	IFNL1	Q8IU54	200 aa		7.39	□□□□□ -1.23
MSI2-216	ENST00000582772	SH3TC2	Q8TF17	1288 aa		7.39	□□□□□ -1.23
MSI2-216	ENST00000582772	TTYH1	Q9H313	450 aa	Predicted RBP	7.39	□□□□□ -1.23
MSI2-216	ENST00000582772	ZSWIM8	A7E2V4	1837 aa		7.38	□□□□□ -1.23
MSI2-216	ENST00000582772		A0A1W2PP64	1363 aa		7.38	□□□□□ -1.23
MSI2-216	ENST00000582772	SBNO2	Q9Y2G9	1366 aa		7.38	□□□□□ -1.23
MSI2-216	ENST00000582772	CXCL9	Q07325	125 aa		7.38	□□□□□ -1.23
MSI2-216	ENST00000582772	MTFR1	Q15390	333 aa		7.38	□□□□□ -1.23
MSI2-216	ENST00000582772	LARGE2	Q8N3Y3	721 aa		7.38	□□□□□ -1.23
MSI2-216	ENST00000582772	CDCA5	Q96FF9	252 aa		7.38	□□□□□ -1.23
MSI2-216	ENST00000582772	FBXL18	Q96ME1	805 aa		7.38	□□□□□ -1.23
MSI2-216	ENST00000582772	VPS33B	Q9H267	617 aa		7.38	□□□□□ -1.23
MSI2-216	ENST00000582772	NIM1K	Q8IY84	436 aa		7.37	□□□□□ -1.23
MSI2-216	ENST00000582772	DCPS	Q96C86	337 aa	Known RBP	7.37	□□□□□ -1.23
MSI2-216	ENST00000582772	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	7.37	□□□□□ -1.23	1e-8	■■■■□ 20
MSI2-216	ENST00000582772	TAOK2	Q9UL54	1235 aa		7.37	□□□□□ -1.23
MSI2-216	ENST00000582772	WASHC2A	Q641Q2	1341 aa		7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	MANSC4	A6NHS7	340 aa	Predicted RBP	7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	MYC	P01106	439 aa	Predicted RBP	7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	GNRH1	P01148	92 aa		7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	BMP1	P13497	986 aa		7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	PRMT2	P55345	433 aa		7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	CRHR2	Q13324	411 aa		7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	USHBP1	Q8N6Y0	703 aa		7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	CNBD1	Q8NA66	436 aa		7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	IL27	Q8NEV9	243 aa		7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	U2AF1L4	Q8WU68	220 aa	Known RBP	7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	NECAB3	Q96P71	396 aa	Predicted RBP	7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	CNOT7	Q9UIV1	285 aa	Known RBP	7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	USP24	Q9UPU5	2620 aa		7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	DNAH12	Q6ZR08	3092 aa		7.36	□□□□□ -1.23
MSI2-216	ENST00000582772	ERVV-2	B6SEH9	535 aa		7.35	□□□□□ -1.23
MSI2-216	ENST00000582772		H7C1D1	291 aa		7.35	□□□□□ -1.23
MSI2-216	ENST00000582772	IGF2BP3	O00425	579 aa	Known RBP eCLIP	7.35	□□□□□ -1.23
MSI2-216	ENST00000582772	ST5	P78524	1137 aa		7.35	□□□□□ -1.23
MSI2-216	ENST00000582772	SULF1	Q8IWU6	871 aa		7.35	□□□□□ -1.23
MSI2-216	ENST00000582772	DPF2	Q92785	391 aa		7.35	□□□□□ -1.23
MSI2-216	ENST00000582772	ZNRF3	Q9ULT6	936 aa		7.35	□□□□□ -1.23
MSI2-216	ENST00000582772	NAV2	Q8IVL1	2488 aa		7.35	□□□□□ -1.23
MSI2-216	ENST00000582772	RIC1	Q4ADV7	1423 aa		7.35	□□□□□ -1.23
MSI2-216	ENST00000582772	NCOR2	Q9Y618	2525 aa		7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	FAM86C2P	A6NEL3	165 aa		7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	PI4K2B	G5E9Z4	385 aa		7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	CCL5	P13501	91 aa		7.34	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms