RNA–Protein interactions for RNA: ENST00000582544.1

CACNB1-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 2

Gene CACNB1, Length 406 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-210ENST00000582544 XAGE3Q8WTP9 111 aa10.3□□□□□ -0.76
CACNB1-210ENST00000582544 RPGRQ92834 1020 aaKnown RBP10.3□□□□□ -0.76
CACNB1-210ENST00000582544 UTP14AQ9BVJ6 771 aaKnown RBP10.3□□□□□ -0.76
CACNB1-210ENST00000582544 VPS33BQ9H267 617 aa10.3□□□□□ -0.76
CACNB1-210ENST00000582544 SPEF2Q9C093 1822 aa10.3□□□□□ -0.76
CACNB1-210ENST00000582544 CASP8AP2Q9UKL3 1982 aa10.3□□□□□ -0.76
CACNB1-210ENST00000582544 FOXN1O15353 648 aa10.29□□□□□ -0.76
CACNB1-210ENST00000582544 ZNF853P0CG23 659 aa10.29□□□□□ -0.76
CACNB1-210ENST00000582544 EIF2S2P20042 333 aaKnown RBP10.29□□□□□ -0.76
CACNB1-210ENST00000582544 EPS15P42566 896 aa10.29□□□□□ -0.76
CACNB1-210ENST00000582544 LMOD3Q0VAK6 560 aa10.29□□□□□ -0.76
CACNB1-210ENST00000582544 CNTROBQ8N137 903 aa10.29□□□□□ -0.76
CACNB1-210ENST00000582544 ISCA1Q9BUE6 129 aa10.29□□□□□ -0.76
CACNB1-210ENST00000582544 FMR1Q06787 632 aaKnown RBP eCLIP10.28□□□□□ -0.76
CACNB1-210ENST00000582544 EAPPQ56P03 285 aaPredicted RBP10.28□□□□□ -0.76
CACNB1-210ENST00000582544 SP8Q8IXZ3 490 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 CCDC146Q8IYE0 955 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 TNS4Q8IZW8 715 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 MIER1Q8N108 512 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 LARGE2Q8N3Y3 721 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 JDP2Q8WYK2 163 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 RUNDC1Q96C34 613 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 NLRP3Q96P20 1036 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 WBP1LQ9NX94 342 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 CHPF2Q9P2E5 772 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 PGAP2Q9UHJ9 254 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 A0A1B0GUL6 1792 aa10.28□□□□□ -0.76
CACNB1-210ENST00000582544 YDJCA8MPS7 323 aa10.27□□□□□ -0.77
CACNB1-210ENST00000582544 HCLS1P14317 486 aaPredicted RBP10.27□□□□□ -0.77
CACNB1-210ENST00000582544 EIF6P56537 245 aaKnown RBP10.27□□□□□ -0.77
CACNB1-210ENST00000582544 CXCL9Q07325 125 aa10.27□□□□□ -0.77
CACNB1-210ENST00000582544 KIAA2012Q0VF49 1180 aa10.27□□□□□ -0.77
CACNB1-210ENST00000582544 AOC3Q16853 763 aa10.27□□□□□ -0.77
CACNB1-210ENST00000582544 HSP90AB3PQ58FF7 597 aa10.27□□□□□ -0.77
CACNB1-210ENST00000582544 CST9Q5W186 159 aa10.27□□□□□ -0.77
CACNB1-210ENST00000582544 PRDM10Q9NQV6 1147 aa10.27□□□□□ -0.77
CACNB1-210ENST00000582544 GPRC5DQ9NZD1 345 aa10.27□□□□□ -0.77
CACNB1-210ENST00000582544 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
CACNB1-210ENST00000582544 SH3TC1Q8TE82 1336 aa10.27□□□□□ -0.77
CACNB1-210ENST00000582544 CDHR2Q9BYE9 1310 aa10.27□□□□□ -0.77
CACNB1-210ENST00000582544 PPIP5K2O43314 1243 aa10.26□□□□□ -0.77
CACNB1-210ENST00000582544 BBOX1O75936 387 aa10.26□□□□□ -0.77
CACNB1-210ENST00000582544 TRIM28Q13263 835 aaKnown RBP10.26□□□□□ -0.77
CACNB1-210ENST00000582544 GRAPQ13588 217 aa10.26□□□□□ -0.77
CACNB1-210ENST00000582544 SF3B3Q15393 1217 aaKnown RBP10.26□□□□□ -0.77
CACNB1-210ENST00000582544 USP50Q70EL3 339 aaPredicted RBP10.26□□□□□ -0.77
CACNB1-210ENST00000582544 PLBD2Q8NHP8 589 aa10.26□□□□□ -0.77
CACNB1-210ENST00000582544 GRAPLQ8TC17 118 aaPredicted RBP10.26□□□□□ -0.77
CACNB1-210ENST00000582544 CFAP44Q96MT7 982 aa10.26□□□□□ -0.77
CACNB1-210ENST00000582544 AKAP11Q9UKA4 1901 aa10.25□□□□□ -0.77
CACNB1-210ENST00000582544 HIRAP54198 1017 aaPredicted RBP10.25□□□□□ -0.77
CACNB1-210ENST00000582544 NIM1KQ8IY84 436 aa10.25□□□□□ -0.77
CACNB1-210ENST00000582544 NECTIN2Q92692 538 aa10.25□□□□□ -0.77
CACNB1-210ENST00000582544 PRKRIP1Q9H875 184 aaPredicted RBP10.25□□□□□ -0.77
CACNB1-210ENST00000582544 MBIPQ9NS73 344 aa10.25□□□□□ -0.77
CACNB1-210ENST00000582544 ZNRF3Q9ULT6 936 aa10.25□□□□□ -0.77
CACNB1-210ENST00000582544 GJA3Q9Y6H8 435 aa10.25□□□□□ -0.77
CACNB1-210ENST00000582544 ZNF609O15014 1411 aa10.24□□□□□ -0.77
CACNB1-210ENST00000582544 TRAF5O00463 557 aa10.24□□□□□ -0.77
CACNB1-210ENST00000582544 TCERG1O14776 1098 aaKnown RBP10.24□□□□□ -0.77
CACNB1-210ENST00000582544 HSPA8P11142 646 aaKnown RBP10.24□□□□□ -0.77
CACNB1-210ENST00000582544 GMPSP49915 693 aaPredicted RBP10.24□□□□□ -0.77
CACNB1-210ENST00000582544 AIMP1Q12904 312 aaKnown RBP10.24□□□□□ -0.77
CACNB1-210ENST00000582544 HDGFL1Q5TGJ6 251 aa10.24□□□□□ -0.77
CACNB1-210ENST00000582544 DUSP27Q5VZP5 1158 aa10.24□□□□□ -0.77
CACNB1-210ENST00000582544 ANKRD13DQ6ZTN6 518 aa10.24□□□□□ -0.77
CACNB1-210ENST00000582544 TMC4Q7Z404 712 aa10.24□□□□□ -0.77
CACNB1-210ENST00000582544 ADARB2Q9NS39 739 aaKnown RBP10.24□□□□□ -0.77
CACNB1-210ENST00000582544 DBF4Q9UBU7 674 aaPredicted RBP10.24□□□□□ -0.77
CACNB1-210ENST00000582544 TRMT112Q9UI30 125 aaKnown RBP10.24□□□□□ -0.77
CACNB1-210ENST00000582544 WDR33Q9C0J8 1336 aaKnown RBP10.24□□□□□ -0.77
CACNB1-210ENST00000582544 PDE4DIPQ5VU43 2346 aa10.24□□□□□ -0.77
CACNB1-210ENST00000582544 SHTN1A0MZ66 631 aa10.23□□□□□ -0.77
CACNB1-210ENST00000582544 LMOD1P29536 600 aaPredicted RBP10.23□□□□□ -0.77
CACNB1-210ENST00000582544 CTCFP49711 727 aaPredicted RBP10.23□□□□□ -0.77
CACNB1-210ENST00000582544 NEUROD2Q15784 382 aa10.23□□□□□ -0.77
CACNB1-210ENST00000582544 DEFB115Q30KQ5 88 aa10.23□□□□□ -0.77
CACNB1-210ENST00000582544 DPP8Q6V1X1 898 aaPredicted RBP10.23□□□□□ -0.77
CACNB1-210ENST00000582544 MPNDQ8N594 471 aa10.23□□□□□ -0.77
CACNB1-210ENST00000582544 SUPT20HQ8NEM7 779 aa10.23□□□□□ -0.77
CACNB1-210ENST00000582544 TRPM4Q8TD43 1214 aa10.23□□□□□ -0.77
CACNB1-210ENST00000582544 CELF1Q92879 486 aaKnown RBP10.23□□□□□ -0.77
CACNB1-210ENST00000582544 CLEC11AQ9Y240 323 aa10.23□□□□□ -0.77
CACNB1-210ENST00000582544 TLL2Q9Y6L7 1015 aa10.23□□□□□ -0.77
CACNB1-210ENST00000582544 LAMB1P07942 1786 aa10.23□□□□□ -0.77
CACNB1-210ENST00000582544 RTL9Q8NET4 1388 aa10.23□□□□□ -0.77
CACNB1-210ENST00000582544 ANP32CO43423 234 aa10.22□□□□□ -0.77
CACNB1-210ENST00000582544 CIAPIN1Q6FI81 312 aa10.22□□□□□ -0.77
CACNB1-210ENST00000582544 DDX46Q7L014 1031 aaKnown RBP10.22□□□□□ -0.77
CACNB1-210ENST00000582544 ZC3H15Q8WU90 426 aaKnown RBP10.22□□□□□ -0.77
CACNB1-210ENST00000582544 FAM89AQ96GI7 184 aa10.22□□□□□ -0.77
CACNB1-210ENST00000582544 HYPKQ9NX55 129 aa10.22□□□□□ -0.77
CACNB1-210ENST00000582544 POLLQ9UGP5 575 aa10.22□□□□□ -0.77
CACNB1-210ENST00000582544 ATP5J2-PTCD1G3V325 749 aa10.21□□□□□ -0.77
CACNB1-210ENST00000582544 SAPCD2Q86UD0 394 aa10.21□□□□□ -0.77
CACNB1-210ENST00000582544 HHIPL1Q96JK4 782 aa10.21□□□□□ -0.77
CACNB1-210ENST00000582544 CAPNS2Q96L46 248 aa10.21□□□□□ -0.77
CACNB1-210ENST00000582544 IFT57Q9NWB7 429 aa10.21□□□□□ -0.77
CACNB1-210ENST00000582544 ECM29Q5VYK3 1845 aa10.21□□□□□ -0.78
CACNB1-210ENST00000582544 APAF1O14727 1248 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms