RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 NUTM2BA6NNL0 878 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 NUTM2EB1AL46 878 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 NUTM2AQ8IVF1 878 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 TRIM44Q96DX7 344 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 ZNF287Q9HBT7 754 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
TRAPPC8-211ENST00000582539 ATP6V1AP38606 617 aa12.03□□□□□ -0.48
TRAPPC8-211ENST00000582539 TRPC5Q9UL62 973 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC8-211ENST00000582539 COL22A1Q8NFW1 1626 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC8-211ENST00000582539 SPATA31A1Q5TZJ5 1347 aa12.03□□□□□ -0.48
TRAPPC8-211ENST00000582539 ATP2B3Q16720 1220 aa12.03□□□□□ -0.48
TRAPPC8-211ENST00000582539 WASHC4Q2M389 1173 aa12.03□□□□□ -0.48
TRAPPC8-211ENST00000582539 PNMA6EA0A0J9YXQ4 647 aa12.02□□□□□ -0.48
TRAPPC8-211ENST00000582539 MCM4P33991 863 aa12.02□□□□□ -0.48
TRAPPC8-211ENST00000582539 ZNF396Q96N95 335 aaPredicted RBP12.02□□□□□ -0.48
TRAPPC8-211ENST00000582539 DSCC1Q9BVC3 393 aa12.02□□□□□ -0.48
TRAPPC8-211ENST00000582539 ADAMTS2O95450 1211 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 CNNM2Q9H8M5 875 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 LDHCP07864 332 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 XBP1P17861 261 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 LDHAL6AQ6ZMR3 332 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 ZBTB3Q9H5J0 574 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 SPATA31A5Q5VU36 1347 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 SPATA31A7Q8IWB4 1347 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 NBPF7P0C2Y1 421 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 HSPA4P34932 840 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 GSTO1P78417 241 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 KBTBD3Q8NAB2 608 aa12.02□□□□□ -0.49
TRAPPC8-211ENST00000582539 H3BQV1 296 aa12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 NRDCO43847 1150 aa12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 PCP11498 1178 aaKnown RBP12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 CWF19L2Q2TBE0 894 aaKnown RBP12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 TMTC2Q8N394 836 aa12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 ZNF512BQ96KM6 892 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 IRS4O14654 1257 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 TRIM29Q14134 588 aa12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 PUM3Q15397 648 aaKnown RBP12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 DNAJC2Q99543 621 aaKnown RBP12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 HAUS7Q99871 368 aa12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 ALDH8A1Q9H2A2 487 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 RNF113AO15541 343 aaKnown RBP12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 KCNQ3O43525 872 aa12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 MRE11P49959 708 aa12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 PPP2R5BQ15173 497 aa12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 LLPHQ9BRT6 129 aaKnown RBP12.01□□□□□ -0.49
TRAPPC8-211ENST00000582539 CCDC196A0A1B0GTZ2 297 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 TPTE2Q6XPS3 522 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 RTCBQ9Y3I0 505 aaKnown RBP12□□□□□ -0.49
TRAPPC8-211ENST00000582539 USP16Q9Y5T5 823 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 LPIN2Q92539 896 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 PAG1Q9NWQ8 432 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 FRAT2O75474 233 aaPredicted RBP12□□□□□ -0.49
TRAPPC8-211ENST00000582539 CWC27Q6UX04 472 aaKnown RBP12□□□□□ -0.49
TRAPPC8-211ENST00000582539 ANKRD18AQ8IVF6 992 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 DNAJC10Q8IXB1 793 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 SIL1Q9H173 461 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 COL18A1P39060 1754 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 CTSWP56202 376 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 TPM4P67936 248 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 IL17RAQ96F46 866 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 MTA3Q9BTC8 594 aa12□□□□□ -0.49
TRAPPC8-211ENST00000582539 HOOK1Q9UJC3 728 aaKnown RBP12□□□□□ -0.49
TRAPPC8-211ENST00000582539 GSPT1P15170 499 aaKnown RBP11.99□□□□□ -0.49
TRAPPC8-211ENST00000582539 CNTNAP4Q9C0A0 1308 aa11.99□□□□□ -0.49
TRAPPC8-211ENST00000582539 CPLX1O14810 134 aa11.99□□□□□ -0.49
TRAPPC8-211ENST00000582539 ST5P78524 1137 aa11.99□□□□□ -0.49
TRAPPC8-211ENST00000582539 NLRP3Q96P20 1036 aa11.99□□□□□ -0.49
TRAPPC8-211ENST00000582539 DDX49Q9Y6V7 483 aaKnown RBP11.99□□□□□ -0.49
TRAPPC8-211ENST00000582539 RTL9Q8NET4 1388 aa11.99□□□□□ -0.49
TRAPPC8-211ENST00000582539 AKAP17AQ02040 695 aaKnown RBP11.99□□□□□ -0.49
TRAPPC8-211ENST00000582539 JAKMIP1Q96N16 626 aaKnown RBP11.99□□□□□ -0.49
TRAPPC8-211ENST00000582539 CFAP45Q9UL16 551 aa11.99□□□□□ -0.49
TRAPPC8-211ENST00000582539 CAVIN2O95810 425 aa11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 SAFBQ15424 915 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 SETDB2Q96T68 719 aa11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 WDR19Q8NEZ3 1342 aa11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 TPM3P06753 285 aa11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 RAB3GAP1Q15042 981 aa11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 JMYQ8N9B5 988 aa11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 RBM27Q9P2N5 1060 aaKnown RBP11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 BCL9O00512 1426 aa11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 DEKP35659 375 aaKnown RBP11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 GNL2Q13823 731 aaKnown RBP11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 DDX17Q92841 729 aaKnown RBP11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 ZSCAN16Q9H4T2 348 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 PHLPP1O60346 1717 aa11.98□□□□□ -0.49
TRAPPC8-211ENST00000582539 LOC102724428A0A0B4J2F2 783 aa11.97□□□□□ -0.49
TRAPPC8-211ENST00000582539 ATP5J2-PTCD1G3V325 749 aa11.97□□□□□ -0.49
TRAPPC8-211ENST00000582539 SIK1P57059 783 aa11.97□□□□□ -0.49
TRAPPC8-211ENST00000582539 DDX46Q7L014 1031 aaKnown RBP11.97□□□□□ -0.49
TRAPPC8-211ENST00000582539 KRT23Q9C075 422 aa11.97□□□□□ -0.49
TRAPPC8-211ENST00000582539 USP21Q9UK80 565 aa11.97□□□□□ -0.49
TRAPPC8-211ENST00000582539 DENND2AQ9ULE3 1009 aa11.97□□□□□ -0.49
TRAPPC8-211ENST00000582539 PLCH1Q4KWH8 1693 aa11.97□□□□□ -0.49
TRAPPC8-211ENST00000582539 ANXA1P04083 346 aa11.97□□□□□ -0.49
TRAPPC8-211ENST00000582539 PIGBQ92521 554 aa11.97□□□□□ -0.49
TRAPPC8-211ENST00000582539 SCAND2PQ9GZW5 306 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms