RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 HTRA3P83110 453 aa28.79■■■□□ 2.2
CASC3-207ENST00000581849 DPP8Q6V1X1 898 aaPredicted RBP28.79■■■□□ 2.2
CASC3-207ENST00000581849 SLC51AQ86UW1 340 aa28.79■■■□□ 2.2
CASC3-207ENST00000581849 PNMA8AQ86V59 439 aaPredicted RBP28.79■■■□□ 2.2
CASC3-207ENST00000581849 MPNDQ8N594 471 aa28.79■■■□□ 2.2
CASC3-207ENST00000581849 JMYQ8N9B5 988 aa28.79■■■□□ 2.2
CASC3-207ENST00000581849 TSR2Q969E8 191 aaKnown RBP28.79■■■□□ 2.2
CASC3-207ENST00000581849 ADAMTSL1Q8N6G6 1762 aa28.79■■■□□ 2.2
CASC3-207ENST00000581849 IRS4O14654 1257 aaPredicted RBP28.78■■■□□ 2.2
CASC3-207ENST00000581849 POTEIP0CG38 1075 aa28.78■■■□□ 2.2
CASC3-207ENST00000581849 POTEJP0CG39 1038 aa28.78■■■□□ 2.2
CASC3-207ENST00000581849 EPHX2P34913 555 aa28.78■■■□□ 2.2
CASC3-207ENST00000581849 METTL22Q9BUU2 404 aaPredicted RBP28.77■■■□□ 2.2
CASC3-207ENST00000581849 STK31Q9BXU1 1019 aa28.77■■■□□ 2.2
CASC3-207ENST00000581849 TAF1P21675 1872 aa28.76■■■□□ 2.2
CASC3-207ENST00000581849 TWISTNBQ3B726 338 aaPredicted RBP28.76■■■□□ 2.19
CASC3-207ENST00000581849 WDR63Q8IWG1 891 aa28.76■■■□□ 2.19
CASC3-207ENST00000581849 MYD88Q99836 296 aa28.76■■■□□ 2.19
CASC3-207ENST00000581849 PCCAP05165 728 aaPredicted RBP28.75■■■□□ 2.19
CASC3-207ENST00000581849 KIAA2012Q0VF49 1180 aa28.75■■■□□ 2.19
CASC3-207ENST00000581849 AOC3Q16853 763 aa28.75■■■□□ 2.19
CASC3-207ENST00000581849 CWC25Q9NXE8 425 aaPredicted RBP28.74■■■□□ 2.19
CASC3-207ENST00000581849 ZNRF3Q9ULT6 936 aa28.74■■■□□ 2.19
CASC3-207ENST00000581849 LMOD1P29536 600 aaPredicted RBP28.73■■■□□ 2.19
CASC3-207ENST00000581849 KSR2Q6VAB6 950 aa28.73■■■□□ 2.19
CASC3-207ENST00000581849 ZNF428Q96B54 188 aa28.73■■■□□ 2.19
CASC3-207ENST00000581849 DUOX1Q9NRD9 1551 aa28.73■■■□□ 2.19
CASC3-207ENST00000581849 CREBZFQ9NS37 354 aa28.73■■■□□ 2.19
CASC3-207ENST00000581849 GJA3Q9Y6H8 435 aa28.73■■■□□ 2.19
CASC3-207ENST00000581849 PASKQ96RG2 1323 aa28.72■■■□□ 2.19
CASC3-207ENST00000581849 CACNA1FO60840 1977 aa28.72■■■□□ 2.19
CASC3-207ENST00000581849 EAPPQ56P03 285 aaPredicted RBP28.72■■■□□ 2.19
CASC3-207ENST00000581849 CELF1Q92879 486 aaKnown RBP28.72■■■□□ 2.19
CASC3-207ENST00000581849 SCNN1DP51172 638 aa28.71■■■□□ 2.19
CASC3-207ENST00000581849 RTL5Q5HYW3 569 aaPredicted RBP28.71■■■□□ 2.19
CASC3-207ENST00000581849 MAP3K2Q9Y2U5 619 aa28.71■■■□□ 2.19
CASC3-207ENST00000581849 LTBP1Q14766 1721 aa28.71■■■□□ 2.19
CASC3-207ENST00000581849 FANCIQ9NVI1 1328 aa28.7■■■□□ 2.19
CASC3-207ENST00000581849 CDHR2Q9BYE9 1310 aa28.69■■■□□ 2.18
CASC3-207ENST00000581849 PI4KAP2A4QPH2 592 aa28.69■■■□□ 2.18
CASC3-207ENST00000581849 PDE8AO60658 829 aa28.69■■■□□ 2.18
CASC3-207ENST00000581849 PI4KAP1Q8N8J0 262 aa28.69■■■□□ 2.18
CASC3-207ENST00000581849 ITGBL1O95965 494 aaPredicted RBP28.68■■■□□ 2.18
CASC3-207ENST00000581849 RPS8P62241 208 aaKnown RBP28.68■■■□□ 2.18
CASC3-207ENST00000581849 CXCL9Q07325 125 aa28.68■■■□□ 2.18
CASC3-207ENST00000581849 NEXNQ0ZGT2 675 aa28.68■■■□□ 2.18
CASC3-207ENST00000581849 CCDC152Q4G0S7 254 aa28.68■■■□□ 2.18
CASC3-207ENST00000581849 CLEC11AQ9Y240 323 aa28.68■■■□□ 2.18
CASC3-207ENST00000581849 SLC4A2P04920 1241 aa28.66■■■□□ 2.18
CASC3-207ENST00000581849 USP50Q70EL3 339 aaPredicted RBP28.66■■■□□ 2.18
CASC3-207ENST00000581849 COL4A1P02462 1669 aa28.65■■■□□ 2.18
CASC3-207ENST00000581849 IGKV5-2P06315 115 aa28.65■■■□□ 2.18
CASC3-207ENST00000581849 TNIP1Q15025 636 aa28.65■■■□□ 2.18
CASC3-207ENST00000581849 CIAPIN1Q6FI81 312 aa28.65■■■□□ 2.18
CASC3-207ENST00000581849 GPRC5DQ9NZD1 345 aa28.65■■■□□ 2.18
CASC3-207ENST00000581849 NSFL1CQ9UNZ2 370 aaKnown RBP28.65■■■□□ 2.18
CASC3-207ENST00000581849 EPS15P42566 896 aa28.64■■■□□ 2.18
CASC3-207ENST00000581849 WASHC4Q2M389 1173 aa28.63■■■□□ 2.17
CASC3-207ENST00000581849 CNTROBQ8N137 903 aa28.63■■■□□ 2.17
CASC3-207ENST00000581849 EYA3Q99504 573 aa28.63■■■□□ 2.17
CASC3-207ENST00000581849 PODXL2Q9NZ53 605 aa28.63■■■□□ 2.17
CASC3-207ENST00000581849 GPSM2P81274 684 aa28.62■■■□□ 2.17
CASC3-207ENST00000581849 G2E3Q7L622 706 aa28.62■■■□□ 2.17
CASC3-207ENST00000581849 ADARB2Q9NS39 739 aaKnown RBP28.62■■■□□ 2.17
CASC3-207ENST00000581849 MYH3P11055 1940 aa28.61■■■□□ 2.17
CASC3-207ENST00000581849 TMEM88BA6NKF7 163 aa28.61■■■□□ 2.17
CASC3-207ENST00000581849 NEURL1BA8MQ27 555 aa28.61■■■□□ 2.17
CASC3-207ENST00000581849 VAMP4O75379 141 aa28.61■■■□□ 2.17
CASC3-207ENST00000581849 FLIIQ13045 1269 aa28.61■■■□□ 2.17
CASC3-207ENST00000581849 MAP1SQ66K74 1059 aaPredicted RBP28.61■■■□□ 2.17
CASC3-207ENST00000581849 SEC31BQ9NQW1 1179 aa28.61■■■□□ 2.17
CASC3-207ENST00000581849 POLLQ9UGP5 575 aa28.61■■■□□ 2.17
CASC3-207ENST00000581849 FAM9BQ8IZU0 186 aa28.6■■■□□ 2.17
CASC3-207ENST00000581849 MYH16Q9H6N6 1097 aa28.6■■■□□ 2.17
CASC3-207ENST00000581849 SALL2Q9Y467 1007 aaPredicted RBP28.6■■■□□ 2.17
CASC3-207ENST00000581849 YDJCA8MPS7 323 aa28.59■■■□□ 2.17
CASC3-207ENST00000581849 C6orf229H3BNL8 230 aa28.59■■■□□ 2.17
CASC3-207ENST00000581849 GMPSP49915 693 aaPredicted RBP28.59■■■□□ 2.17
CASC3-207ENST00000581849 CTSWP56202 376 aa28.59■■■□□ 2.17
CASC3-207ENST00000581849 TBC1D16Q8TBP0 767 aa28.59■■■□□ 2.17
CASC3-207ENST00000581849 RTL9Q8NET4 1388 aa28.59■■■□□ 2.17
CASC3-207ENST00000581849 EXOSC9Q06265 439 aaKnown RBP28.58■■■□□ 2.17
CASC3-207ENST00000581849 CNTNAP1P78357 1384 aa28.58■■■□□ 2.17
CASC3-207ENST00000581849 RAD17O75943 681 aa28.57■■■□□ 2.16
CASC3-207ENST00000581849 FKBP5Q13451 457 aaPredicted RBP28.57■■■□□ 2.16
CASC3-207ENST00000581849 CWF19L2Q2TBE0 894 aaKnown RBP28.57■■■□□ 2.16
CASC3-207ENST00000581849 ANKRD18AQ8IVF6 992 aa28.57■■■□□ 2.16
CASC3-207ENST00000581849 JARID2Q92833 1246 aaPredicted RBP28.57■■■□□ 2.16
CASC3-207ENST00000581849 CDC5LQ99459 802 aaKnown RBP28.57■■■□□ 2.16
CASC3-207ENST00000581849 H7C1W4 665 aa28.56■■■□□ 2.16
CASC3-207ENST00000581849 DNAAF4Q8WXU2 420 aa28.56■■■□□ 2.16
CASC3-207ENST00000581849 BCL2L13Q9BXK5 485 aa28.56■■■□□ 2.16
CASC3-207ENST00000581849 LINS1Q8NG48 757 aa28.55■■■□□ 2.16
CASC3-207ENST00000581849 TTLL11Q8NHH1 800 aa28.55■■■□□ 2.16
CASC3-207ENST00000581849 DPF2Q92785 391 aa28.55■■■□□ 2.16
CASC3-207ENST00000581849 GCKRQ14397 625 aa28.54■■■□□ 2.16
CASC3-207ENST00000581849 PLA2G12BQ9BX93 195 aa28.54■■■□□ 2.16
CASC3-207ENST00000581849 ZC3H12CQ9C0D7 883 aaKnown RBP28.54■■■□□ 2.16
CASC3-207ENST00000581849 SPINK5Q9NQ38 1064 aaPredicted RBP28.54■■■□□ 2.16
CASC3-207ENST00000581849 ANKIB1Q9P2G1 1089 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms