RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 DEAF1O75398 565 aaPredicted RBP10.18□□□□□ -0.78
SMCHD1-207ENST00000581711 IDH3AP50213 366 aa10.18□□□□□ -0.78
SMCHD1-207ENST00000581711 MLLT1Q03111 559 aaPredicted RBP10.18□□□□□ -0.78
SMCHD1-207ENST00000581711 MCTP1Q6DN14 999 aa10.18□□□□□ -0.78
SMCHD1-207ENST00000581711 TTC9Q92623 222 aa10.18□□□□□ -0.78
SMCHD1-207ENST00000581711 GPLD1P80108 840 aa10.17□□□□□ -0.78
SMCHD1-207ENST00000581711 TARSP26639 723 aaKnown RBP10.16□□□□□ -0.78
SMCHD1-207ENST00000581711 HINFPQ9BQA5 517 aa10.16□□□□□ -0.78
SMCHD1-207ENST00000581711 KLK14Q9P0G3 267 aa10.16□□□□□ -0.78
SMCHD1-207ENST00000581711 DLL1O00548 723 aa10.15□□□□□ -0.78
SMCHD1-207ENST00000581711 RARAP10276 462 aa10.15□□□□□ -0.78
SMCHD1-207ENST00000581711 IFT43Q96FT9 208 aa10.15□□□□□ -0.78
SMCHD1-207ENST00000581711 SMG9Q9H0W8 520 aaKnown RBP10.15□□□□□ -0.78
SMCHD1-207ENST00000581711 PCMTD2Q9NV79 361 aa10.15□□□□□ -0.78
SMCHD1-207ENST00000581711 LGR5O75473 907 aa10.14□□□□□ -0.79
SMCHD1-207ENST00000581711 DZIP1LQ8IYY4 767 aaKnown RBP10.14□□□□□ -0.79
SMCHD1-207ENST00000581711 AKTIPQ9H8T0 292 aa10.14□□□□□ -0.79
SMCHD1-207ENST00000581711 SASH3O75995 380 aa10.13□□□□□ -0.79
SMCHD1-207ENST00000581711 UBTFP17480 764 aaKnown RBP10.13□□□□□ -0.79
SMCHD1-207ENST00000581711 FSTP19883 344 aa10.13□□□□□ -0.79
SMCHD1-207ENST00000581711 IGFBP4P22692 258 aa10.13□□□□□ -0.79
SMCHD1-207ENST00000581711 ARSDP51689 593 aa10.13□□□□□ -0.79
SMCHD1-207ENST00000581711 C11orf16Q9NQ32 467 aa10.13□□□□□ -0.79
SMCHD1-207ENST00000581711 DGKZQ13574 1117 aa10.12□□□□□ -0.79
SMCHD1-207ENST00000581711 HFE2Q6ZVN8 426 aa10.12□□□□□ -0.79
SMCHD1-207ENST00000581711 EIF2AK2P19525 551 aaKnown RBP10.11□□□□□ -0.79
SMCHD1-207ENST00000581711 NRLP54845 237 aa10.11□□□□□ -0.79
SMCHD1-207ENST00000581711 SLC51AQ86UW1 340 aa10.11□□□□□ -0.79
SMCHD1-207ENST00000581711 TFIP11Q9UBB9 837 aaKnown RBP10.11□□□□□ -0.79
SMCHD1-207ENST00000581711 MAFBQ9Y5Q3 323 aaPredicted RBP10.11□□□□□ -0.79
SMCHD1-207ENST00000581711 ALX3O95076 343 aa10.1□□□□□ -0.79
SMCHD1-207ENST00000581711 ARID4AP29374 1257 aaPredicted RBP10.1□□□□□ -0.79
SMCHD1-207ENST00000581711 SSTR4P31391 388 aa10.1□□□□□ -0.79
SMCHD1-207ENST00000581711 LARP1Q6PKG0 1096 aaKnown RBP10.1□□□□□ -0.79
SMCHD1-207ENST00000581711 MRPL18Q9H0U6 180 aaKnown RBP10.1□□□□□ -0.79
SMCHD1-207ENST00000581711 MICAL2O94851 1124 aa10.09□□□□□ -0.79
SMCHD1-207ENST00000581711 DPYDQ12882 1025 aa10.09□□□□□ -0.79
SMCHD1-207ENST00000581711 CRTC2Q53ET0 693 aaPredicted RBP10.09□□□□□ -0.79
SMCHD1-207ENST00000581711 TMEM130Q8N3G9 435 aa10.09□□□□□ -0.79
SMCHD1-207ENST00000581711 QTRT2Q9H974 415 aaKnown RBP10.09□□□□□ -0.79
SMCHD1-207ENST00000581711 COL17A1Q9UMD9 1497 aaPredicted RBP10.09□□□□□ -0.79
SMCHD1-207ENST00000581711 F8W735 103 aaPredicted RBP10.08□□□□□ -0.8
SMCHD1-207ENST00000581711 CD97P48960 835 aa10.08□□□□□ -0.8
SMCHD1-207ENST00000581711 PTK7Q13308 1070 aa10.08□□□□□ -0.8
SMCHD1-207ENST00000581711 TLR7Q9NYK1 1049 aaKnown RBP10.08□□□□□ -0.8
SMCHD1-207ENST00000581711 FLIIQ13045 1269 aa10.07□□□□□ -0.8
SMCHD1-207ENST00000581711 PLD4Q96BZ4 506 aa10.07□□□□□ -0.8
SMCHD1-207ENST00000581711 GLMNQ92990 594 aa10.06□□□□□ -0.8
SMCHD1-207ENST00000581711 RTCBQ9Y3I0 505 aaKnown RBP10.06□□□□□ -0.8
SMCHD1-207ENST00000581711 PAX4O43316 350 aa10.05□□□□□ -0.8
SMCHD1-207ENST00000581711 GDF6Q6KF10 455 aaPredicted RBP10.05□□□□□ -0.8
SMCHD1-207ENST00000581711 Q6ZS46 218 aa10.05□□□□□ -0.8
SMCHD1-207ENST00000581711 SRA1Q9HD15 236 aaKnown RBP10.05□□□□□ -0.8
SMCHD1-207ENST00000581711 USP20Q9Y2K6 914 aa10.05□□□□□ -0.8
SMCHD1-207ENST00000581711 J3QW42 95 aa10.04□□□□□ -0.8
SMCHD1-207ENST00000581711 OPLAHO14841 1288 aa10.04□□□□□ -0.8
SMCHD1-207ENST00000581711 EGFRP00533 1210 aa10.04□□□□□ -0.8
SMCHD1-207ENST00000581711 C11orf91Q3C1V1 193 aa10.04□□□□□ -0.8
SMCHD1-207ENST00000581711 IL22RA1Q8N6P7 574 aa10.04□□□□□ -0.8
SMCHD1-207ENST00000581711 LOC102724428A0A0B4J2F2 783 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 KRTAP4-8A0A0G2JLE6 195 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L15C9J2P7 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L10C9JJH3 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L13C9JLJ4 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L12C9JPN9 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L11C9JVI0 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L21D6R901 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L18D6R9N7 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L22D6RA61 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L17D6RBQ6 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L19D6RCP7 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L20D6RJB6 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 XYLBO75191 536 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 SIK1P57059 783 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 USP17L24Q0WX57 530 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 SETDB1Q15047 1291 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 ANKMY2Q8IV38 441 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 MYO19Q96H55 970 aa10.03□□□□□ -0.8
SMCHD1-207ENST00000581711 FOXO3O43524 673 aa10.02□□□□□ -0.81
SMCHD1-207ENST00000581711 PSAPP07602 524 aa10.02□□□□□ -0.81
SMCHD1-207ENST00000581711 GLB1P16278 677 aa10.02□□□□□ -0.81
SMCHD1-207ENST00000581711 KANK4Q5T7N3 995 aaPredicted RBP10.02□□□□□ -0.81
SMCHD1-207ENST00000581711 MAP4K3Q8IVH8 894 aa10.02□□□□□ -0.81
SMCHD1-207ENST00000581711 AGGF1Q8N302 714 aaeCLIP10.02□□□□□ -0.81
SMCHD1-207ENST00000581711 DCAF11Q8TEB1 546 aa10.02□□□□□ -0.81
SMCHD1-207ENST00000581711 NSUN5Q96P11 429 aaKnown RBP10.02□□□□□ -0.81
SMCHD1-207ENST00000581711 FAM196BA6NMK8 535 aa10.01□□□□□ -0.81
SMCHD1-207ENST00000581711 PTCD1O75127 700 aaKnown RBP10.01□□□□□ -0.81
SMCHD1-207ENST00000581711 GHRHP01286 108 aa10.01□□□□□ -0.81
SMCHD1-207ENST00000581711 WEE1P30291 646 aa10.01□□□□□ -0.81
SMCHD1-207ENST00000581711 RGL4Q8IZJ4 473 aa10.01□□□□□ -0.81
SMCHD1-207ENST00000581711 VTI1AQ96AJ9 217 aa10.01□□□□□ -0.81
SMCHD1-207ENST00000581711 RAXQ9Y2V3 346 aa10.01□□□□□ -0.81
SMCHD1-207ENST00000581711 GSC2O15499 205 aa10□□□□□ -0.81
SMCHD1-207ENST00000581711 MMP20O60882 483 aa10□□□□□ -0.81
SMCHD1-207ENST00000581711 MED26O95402 600 aa10□□□□□ -0.81
SMCHD1-207ENST00000581711 IRAK1P51617 712 aa10□□□□□ -0.81
SMCHD1-207ENST00000581711 CMTR1Q8N1G2 835 aaKnown RBP10□□□□□ -0.81
SMCHD1-207ENST00000581711 KIAA1324LA8MWY0 1029 aaPredicted RBP9.99□□□□□ -0.81
SMCHD1-207ENST00000581711 HOXD8P13378 290 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms