RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 HCLS1P14317 486 aaPredicted RBP13.85□□□□□ -0.19
RFFL-209ENST00000581265 EPS15P42566 896 aa13.85□□□□□ -0.19
RFFL-209ENST00000581265 KRT24Q2M2I5 525 aa13.85□□□□□ -0.19
RFFL-209ENST00000581265 USP50Q70EL3 339 aaPredicted RBP13.85□□□□□ -0.19
RFFL-209ENST00000581265 CCDC146Q8IYE0 955 aa13.85□□□□□ -0.19
RFFL-209ENST00000581265 SUPT20HQ8NEM7 779 aa13.85□□□□□ -0.19
RFFL-209ENST00000581265 TRMT112Q9UI30 125 aaKnown RBP13.85□□□□□ -0.19
RFFL-209ENST00000581265 ABCC4O15439 1325 aa13.85□□□□□ -0.19
RFFL-209ENST00000581265 SH3TC1Q8TE82 1336 aa13.85□□□□□ -0.19
RFFL-209ENST00000581265 HOXB7P09629 217 aa13.84□□□□□ -0.19
RFFL-209ENST00000581265 MAP2K2P36507 400 aa13.84□□□□□ -0.19
RFFL-209ENST00000581265 AOC3Q16853 763 aa13.84□□□□□ -0.19
RFFL-209ENST00000581265 ZNRF3Q9ULT6 936 aa13.84□□□□□ -0.19
RFFL-209ENST00000581265 ADAMTS8Q9UP79 889 aa13.84□□□□□ -0.19
RFFL-209ENST00000581265 AOC2O75106 756 aa13.83□□□□□ -0.2
RFFL-209ENST00000581265 CXCL9Q07325 125 aa13.83□□□□□ -0.2
RFFL-209ENST00000581265 WDR43Q15061 677 aaKnown RBP eCLIP13.83□□□□□ -0.2
RFFL-209ENST00000581265 ANKRD13DQ6ZTN6 518 aa13.83□□□□□ -0.2
RFFL-209ENST00000581265 DDX46Q7L014 1031 aaKnown RBP13.83□□□□□ -0.2
RFFL-209ENST00000581265 MPNDQ8N594 471 aa13.83□□□□□ -0.2
RFFL-209ENST00000581265 PLBD2Q8NHP8 589 aa13.83□□□□□ -0.2
RFFL-209ENST00000581265 CHPF2Q9P2E5 772 aa13.83□□□□□ -0.2
RFFL-209ENST00000581265 LAS1LQ9Y4W2 734 aaKnown RBP13.83□□□□□ -0.2
RFFL-209ENST00000581265 KIAA2012Q0VF49 1180 aa13.82□□□□□ -0.2
RFFL-209ENST00000581265 GRAPQ13588 217 aa13.82□□□□□ -0.2
RFFL-209ENST00000581265 HDGFL1Q5TGJ6 251 aa13.82□□□□□ -0.2
RFFL-209ENST00000581265 DPP8Q6V1X1 898 aaPredicted RBP13.82□□□□□ -0.2
RFFL-209ENST00000581265 TMC4Q7Z404 712 aa13.82□□□□□ -0.2
RFFL-209ENST00000581265 GRAPLQ8TC17 118 aaPredicted RBP13.82□□□□□ -0.2
RFFL-209ENST00000581265 GPRC5DQ9NZD1 345 aa13.82□□□□□ -0.2
RFFL-209ENST00000581265 DBF4Q9UBU7 674 aaPredicted RBP13.82□□□□□ -0.2
RFFL-209ENST00000581265 FMR1Q06787 632 aaKnown RBP eCLIP13.81□□□□□ -0.2
RFFL-209ENST00000581265 ISCA1Q9BUE6 129 aa13.81□□□□□ -0.2
RFFL-209ENST00000581265 ADARB2Q9NS39 739 aaKnown RBP13.81□□□□□ -0.2
RFFL-209ENST00000581265 HYPKQ9NX55 129 aa13.81□□□□□ -0.2
RFFL-209ENST00000581265 TLL2Q9Y6L7 1015 aa13.81□□□□□ -0.2
RFFL-209ENST00000581265 LTBP1Q14766 1721 aa13.81□□□□□ -0.2
RFFL-209ENST00000581265 SOX10P56693 466 aa13.8□□□□□ -0.2
RFFL-209ENST00000581265 TRIM28Q13263 835 aaKnown RBP13.8□□□□□ -0.2
RFFL-209ENST00000581265 SF3B3Q15393 1217 aaKnown RBP13.8□□□□□ -0.2
RFFL-209ENST00000581265 PRPF38BQ5VTL8 546 aaKnown RBP13.8□□□□□ -0.2
RFFL-209ENST00000581265 PGAP2Q9UHJ9 254 aa13.8□□□□□ -0.2
RFFL-209ENST00000581265 TNIP1Q15025 636 aa13.79□□□□□ -0.2
RFFL-209ENST00000581265 DUSP27Q5VZP5 1158 aa13.79□□□□□ -0.2
RFFL-209ENST00000581265 CST9Q5W186 159 aa13.79□□□□□ -0.2
RFFL-209ENST00000581265 CIAPIN1Q6FI81 312 aa13.79□□□□□ -0.2
RFFL-209ENST00000581265 ANKRD36CQ5JPF3 1778 aa13.78□□□□□ -0.2
RFFL-209ENST00000581265 TRAF5O00463 557 aa13.78□□□□□ -0.2
RFFL-209ENST00000581265 ZNF853P0CG23 659 aa13.78□□□□□ -0.2
RFFL-209ENST00000581265 GMPSP49915 693 aaPredicted RBP13.78□□□□□ -0.2
RFFL-209ENST00000581265 BRPF1P55201 1214 aaPredicted RBP13.78□□□□□ -0.2
RFFL-209ENST00000581265 ZC3H15Q8WU90 426 aaKnown RBP13.78□□□□□ -0.2
RFFL-209ENST00000581265 FAM89AQ96GI7 184 aa13.78□□□□□ -0.2
RFFL-209ENST00000581265 PRKRIP1Q9H875 184 aaPredicted RBP13.78□□□□□ -0.2
RFFL-209ENST00000581265 MBIPQ9NS73 344 aa13.78□□□□□ -0.2
RFFL-209ENST00000581265 CDHR2Q9BYE9 1310 aa13.78□□□□□ -0.2
RFFL-209ENST00000581265 ATP5J2-PTCD1G3V325 749 aa13.77□□□□□ -0.21
RFFL-209ENST00000581265 RAD17O75943 681 aa13.77□□□□□ -0.21
RFFL-209ENST00000581265 THSD7BQ9C0I4 1608 aa13.77□□□□□ -0.21
RFFL-209ENST00000581265 YDJCA8MPS7 323 aa13.76□□□□□ -0.21
RFFL-209ENST00000581265 CELF2O95319 508 aaKnown RBP13.76□□□□□ -0.21
RFFL-209ENST00000581265 HIRAP54198 1017 aaPredicted RBP13.76□□□□□ -0.21
RFFL-209ENST00000581265 WASHC4Q2M389 1173 aa13.76□□□□□ -0.21
RFFL-209ENST00000581265 CELF1Q92879 486 aaKnown RBP13.76□□□□□ -0.21
RFFL-209ENST00000581265 ZNF428Q96B54 188 aa13.76□□□□□ -0.21
RFFL-209ENST00000581265 BCL2L13Q9BXK5 485 aa13.76□□□□□ -0.21
RFFL-209ENST00000581265 CNOT7Q9UIV1 285 aaKnown RBP13.76□□□□□ -0.21
RFFL-209ENST00000581265 NSFL1CQ9UNZ2 370 aaKnown RBP13.76□□□□□ -0.21
RFFL-209ENST00000581265 LAMB2P55268 1798 aa13.76□□□□□ -0.21
RFFL-209ENST00000581265 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
RFFL-209ENST00000581265 APAF1O14727 1248 aa13.75□□□□□ -0.21
RFFL-209ENST00000581265 RPS8P62241 208 aaKnown RBP13.75□□□□□ -0.21
RFFL-209ENST00000581265 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
RFFL-209ENST00000581265 DPF2Q92785 391 aa13.75□□□□□ -0.21
RFFL-209ENST00000581265 ZNF408Q9H9D4 720 aa13.75□□□□□ -0.21
RFFL-209ENST00000581265 IFT57Q9NWB7 429 aa13.75□□□□□ -0.21
RFFL-209ENST00000581265 GNAI1P63096 354 aa13.74□□□□□ -0.21
RFFL-209ENST00000581265 RTL5Q5HYW3 569 aaPredicted RBP13.74□□□□□ -0.21
RFFL-209ENST00000581265 RIC3Q7Z5B4 369 aa13.74□□□□□ -0.21
RFFL-209ENST00000581265 SAPCD2Q86UD0 394 aa13.74□□□□□ -0.21
RFFL-209ENST00000581265 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
RFFL-209ENST00000581265 POLLQ9UGP5 575 aa13.74□□□□□ -0.21
RFFL-209ENST00000581265 TAF1P21675 1872 aa13.74□□□□□ -0.21
RFFL-209ENST00000581265 H7C1D1 291 aa13.73□□□□□ -0.21
RFFL-209ENST00000581265 HSP90B1P14625 803 aaKnown RBP13.73□□□□□ -0.21
RFFL-209ENST00000581265 GPSM2P81274 684 aa13.73□□□□□ -0.21
RFFL-209ENST00000581265 CDC37L1Q7L3B6 337 aa13.73□□□□□ -0.21
RFFL-209ENST00000581265 HHIPL1Q96JK4 782 aa13.73□□□□□ -0.21
RFFL-209ENST00000581265 GLIS2Q9BZE0 524 aaPredicted RBP13.73□□□□□ -0.21
RFFL-209ENST00000581265 PHAXQ9H814 394 aaKnown RBP13.73□□□□□ -0.21
RFFL-209ENST00000581265 DUOX1Q9NRD9 1551 aa13.72□□□□□ -0.21
RFFL-209ENST00000581265 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
RFFL-209ENST00000581265 ELL2O00472 640 aaPredicted RBP13.72□□□□□ -0.21
RFFL-209ENST00000581265 GOLGA2Q08379 1002 aa13.72□□□□□ -0.21
RFFL-209ENST00000581265 NOGQ13253 232 aa13.72□□□□□ -0.21
RFFL-209ENST00000581265 MICALL2Q8IY33 904 aa13.72□□□□□ -0.21
RFFL-209ENST00000581265 CCDC191Q8NCU4 936 aa13.72□□□□□ -0.21
RFFL-209ENST00000581265 TRPM4Q8TD43 1214 aa13.72□□□□□ -0.21
RFFL-209ENST00000581265 CHMP4AQ9BY43 222 aa13.72□□□□□ -0.21
RFFL-209ENST00000581265 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms