RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 TRIM37O94972 964 aa9.92□□□□□ -0.82
KPNB1-210ENST00000580573 PCCAP05165 728 aaPredicted RBP9.92□□□□□ -0.82
KPNB1-210ENST00000580573 EPHA10Q5JZY3 1008 aa9.92□□□□□ -0.82
KPNB1-210ENST00000580573 NLRP10Q86W26 655 aa9.92□□□□□ -0.82
KPNB1-210ENST00000580573 BICC1Q9H694 974 aaKnown RBP9.92□□□□□ -0.82
KPNB1-210ENST00000580573 AK9Q5TCS8 1911 aa9.92□□□□□ -0.82
KPNB1-210ENST00000580573 RFX5P48382 616 aaPredicted RBP9.91□□□□□ -0.82
KPNB1-210ENST00000580573 FOXO4P98177 505 aa9.91□□□□□ -0.82
KPNB1-210ENST00000580573 UBE3BQ7Z3V4 1068 aa9.91□□□□□ -0.82
KPNB1-210ENST00000580573 ZBTB38Q8NAP3 1195 aaPredicted RBP9.91□□□□□ -0.82
KPNB1-210ENST00000580573 NARFQ9UHQ1 456 aa9.91□□□□□ -0.82
KPNB1-210ENST00000580573 TBC1D2BQ9UPU7 963 aa9.91□□□□□ -0.82
KPNB1-210ENST00000580573 ARAP2Q8WZ64 1704 aa9.9□□□□□ -0.82
KPNB1-210ENST00000580573 SRGAP3O43295 1099 aa9.9□□□□□ -0.82
KPNB1-210ENST00000580573 PARP10Q53GL7 1025 aa9.9□□□□□ -0.82
KPNB1-210ENST00000580573 AMIGO3Q86WK7 504 aa9.9□□□□□ -0.82
KPNB1-210ENST00000580573 AK7Q96M32 723 aa9.9□□□□□ -0.82
KPNB1-210ENST00000580573 BCL2L12Q9HB09 334 aa9.9□□□□□ -0.82
KPNB1-210ENST00000580573 COPRSQ9NQ92 184 aa9.9□□□□□ -0.82
KPNB1-210ENST00000580573 RIC1Q4ADV7 1423 aa9.9□□□□□ -0.83
KPNB1-210ENST00000580573 SPEF2Q9C093 1822 aa9.89□□□□□ -0.83
KPNB1-210ENST00000580573 USP42Q9H9J4 1324 aaKnown RBP9.89□□□□□ -0.83
KPNB1-210ENST00000580573 RAB11FIP3O75154 756 aa9.89□□□□□ -0.83
KPNB1-210ENST00000580573 CSF1RP07333 972 aa9.89□□□□□ -0.83
KPNB1-210ENST00000580573 KCNQ4P56696 695 aa9.89□□□□□ -0.83
KPNB1-210ENST00000580573 TXNRD1Q16881 649 aa9.89□□□□□ -0.83
KPNB1-210ENST00000580573 ZNF652Q9Y2D9 606 aa9.89□□□□□ -0.83
KPNB1-210ENST00000580573 TNRC6CQ9HCJ0 1690 aaKnown RBP9.89□□□□□ -0.83
KPNB1-210ENST00000580573 RTL9Q8NET4 1388 aa9.88□□□□□ -0.83
KPNB1-210ENST00000580573 GNPATO15228 680 aa9.88□□□□□ -0.83
KPNB1-210ENST00000580573 NTSR2O95665 410 aa9.88□□□□□ -0.83
KPNB1-210ENST00000580573 SSFA2P28290 1259 aa9.88□□□□□ -0.83
KPNB1-210ENST00000580573 HSP90AB4PQ58FF6 505 aa9.88□□□□□ -0.83
KPNB1-210ENST00000580573 ANKRD45Q5TZF3 282 aa9.88□□□□□ -0.83
KPNB1-210ENST00000580573 NPM2Q86SE8 214 aaKnown RBP9.88□□□□□ -0.83
KPNB1-210ENST00000580573 MFRPQ9BY79 579 aa9.88□□□□□ -0.83
KPNB1-210ENST00000580573 LNPKQ9C0E8 428 aa9.88□□□□□ -0.83
KPNB1-210ENST00000580573 OSBPL3Q9H4L5 887 aa9.88□□□□□ -0.83
KPNB1-210ENST00000580573 EXOC6BQ9Y2D4 811 aa9.88□□□□□ -0.83
KPNB1-210ENST00000580573 RTCBQ9Y3I0 505 aaKnown RBP9.88□□□□□ -0.83
KPNB1-210ENST00000580573 ZNF330Q9Y3S2 320 aaPredicted RBP9.88□□□□□ -0.83
KPNB1-210ENST00000580573 RGS3P49796 1198 aa9.87□□□□□ -0.83
KPNB1-210ENST00000580573 PTPN12Q05209 780 aaKnown RBP9.87□□□□□ -0.83
KPNB1-210ENST00000580573 PLEKHM2Q8IWE5 1019 aa9.87□□□□□ -0.83
KPNB1-210ENST00000580573 KIF1BPQ96EK5 621 aa9.87□□□□□ -0.83
KPNB1-210ENST00000580573 LRRCC1Q9C099 1032 aa9.87□□□□□ -0.83
KPNB1-210ENST00000580573 ANKRD31Q8N7Z5 1873 aa9.87□□□□□ -0.83
KPNB1-210ENST00000580573 AOX1Q06278 1338 aa9.86□□□□□ -0.83
KPNB1-210ENST00000580573 SURF6O75683 361 aaKnown RBP9.86□□□□□ -0.83
KPNB1-210ENST00000580573 GPTP24298 496 aa9.86□□□□□ -0.83
KPNB1-210ENST00000580573 C8orf34Q49A92 452 aa9.86□□□□□ -0.83
KPNB1-210ENST00000580573 BMP2KLQ5H9B9 411 aa9.86□□□□□ -0.83
KPNB1-210ENST00000580573 SUSD4Q5VX71 490 aa9.86□□□□□ -0.83
KPNB1-210ENST00000580573 LMBR1LQ6UX01 489 aa9.86□□□□□ -0.83
KPNB1-210ENST00000580573 ERC1Q8IUD2 1116 aa9.86□□□□□ -0.83
KPNB1-210ENST00000580573 RHPN1Q8TCX5 695 aa9.86□□□□□ -0.83
KPNB1-210ENST00000580573 ARHGEF1Q92888 912 aaKnown RBP9.86□□□□□ -0.83
KPNB1-210ENST00000580573 BACH2Q9BYV9 841 aa9.86□□□□□ -0.83
KPNB1-210ENST00000580573 STAP2Q9UGK3 403 aa9.86□□□□□ -0.83
KPNB1-210ENST00000580573 COL4A1P02462 1669 aa9.86□□□□□ -0.83
KPNB1-210ENST00000580573 SH3TC1Q8TE82 1336 aa9.85□□□□□ -0.83
KPNB1-210ENST00000580573 TAF1P21675 1872 aa9.85□□□□□ -0.83
KPNB1-210ENST00000580573 CIAO1O76071 339 aa9.85□□□□□ -0.83
KPNB1-210ENST00000580573 SASH1O94885 1247 aa9.85□□□□□ -0.83
KPNB1-210ENST00000580573 CTSWP56202 376 aa9.85□□□□□ -0.83
KPNB1-210ENST00000580573 FAM161AQ3B820 660 aa9.85□□□□□ -0.83
KPNB1-210ENST00000580573 SLC10A5Q5PT55 438 aa9.85□□□□□ -0.83
KPNB1-210ENST00000580573 EFCAB3Q8N7B9 438 aa9.85□□□□□ -0.83
KPNB1-210ENST00000580573 TTLL11Q8NHH1 800 aa9.85□□□□□ -0.83
KPNB1-210ENST00000580573 JARID2Q92833 1246 aaPredicted RBP9.85□□□□□ -0.83
KPNB1-210ENST00000580573 FAM89AQ96GI7 184 aa9.85□□□□□ -0.83
KPNB1-210ENST00000580573 NIP7Q9Y221 180 aaKnown RBP eCLIP9.85□□□□□ -0.83
KPNB1-210ENST00000580573 LRRC37AA6NMS7 1700 aa9.85□□□□□ -0.83
KPNB1-210ENST00000580573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.84□□□□□ -0.83
KPNB1-210ENST00000580573 IRS4O14654 1257 aaPredicted RBP9.84□□□□□ -0.83
KPNB1-210ENST00000580573 PDE8AO60658 829 aa9.84□□□□□ -0.83
KPNB1-210ENST00000580573 APBA3O96018 575 aa9.84□□□□□ -0.83
KPNB1-210ENST00000580573 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
KPNB1-210ENST00000580573 USPL1Q5W0Q7 1092 aa9.84□□□□□ -0.83
KPNB1-210ENST00000580573 TBC1D9BQ66K14 1250 aa9.84□□□□□ -0.83
KPNB1-210ENST00000580573 ATG9AQ7Z3C6 839 aa9.84□□□□□ -0.83
KPNB1-210ENST00000580573 SYNE4Q8N205 404 aa9.84□□□□□ -0.83
KPNB1-210ENST00000580573 OTUD7AQ8TE49 926 aaPredicted RBP9.84□□□□□ -0.83
KPNB1-210ENST00000580573 MS4A3Q96HJ5 214 aa9.84□□□□□ -0.83
KPNB1-210ENST00000580573 CAMKK2Q96RR4 588 aa9.84□□□□□ -0.83
KPNB1-210ENST00000580573 UTP14AQ9BVJ6 771 aaKnown RBP9.84□□□□□ -0.83
KPNB1-210ENST00000580573 TRMT112Q9UI30 125 aaKnown RBP9.84□□□□□ -0.83
KPNB1-210ENST00000580573 PA2G4Q9UQ80 394 aaKnown RBP9.84□□□□□ -0.83
KPNB1-210ENST00000580573 CARMIL3Q8ND23 1372 aa9.84□□□□□ -0.83
KPNB1-210ENST00000580573 SMARCA5O60264 1052 aaPredicted RBP9.83□□□□□ -0.84
KPNB1-210ENST00000580573 HSP90B1P14625 803 aaKnown RBP9.83□□□□□ -0.84
KPNB1-210ENST00000580573 GSPT1P15170 499 aaKnown RBP9.83□□□□□ -0.84
KPNB1-210ENST00000580573 PDE1AP54750 535 aa9.83□□□□□ -0.84
KPNB1-210ENST00000580573 ZNF827Q17R98 1081 aa9.83□□□□□ -0.84
KPNB1-210ENST00000580573 TTC22Q5TAA0 569 aa9.83□□□□□ -0.84
KPNB1-210ENST00000580573 C16orf71Q8IYS4 520 aaPredicted RBP9.83□□□□□ -0.84
KPNB1-210ENST00000580573 GPR108Q9NPR9 543 aa9.83□□□□□ -0.84
KPNB1-210ENST00000580573 SRP68Q9UHB9 627 aaKnown RBP9.83□□□□□ -0.84
KPNB1-210ENST00000580573 ABCC12Q96J65 1359 aa9.83□□□□□ -0.84
KPNB1-210ENST00000580573 AKAP11Q9UKA4 1901 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms