RNA–Protein interactions for RNA: ENST00000580506.2

RN7SL543P-201, Transcript of RNA, 7SL, cytoplasmic 543, pseudogene, humanhuman

BASIC

Gene RN7SL543P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL543P-201ENST00000580506 UBE3BQ7Z3V4 1068 aa13.78□□□□□ -0.2
RN7SL543P-201ENST00000580506 SP8Q8IXZ3 490 aa13.78□□□□□ -0.2
RN7SL543P-201ENST00000580506 TTLL11Q8NHH1 800 aa13.78□□□□□ -0.2
RN7SL543P-201ENST00000580506 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
RN7SL543P-201ENST00000580506 FER1L6Q2WGJ9 1857 aa13.78□□□□□ -0.2
RN7SL543P-201ENST00000580506 CT47B1P0C2W7 299 aaPredicted RBP13.77□□□□□ -0.21
RN7SL543P-201ENST00000580506 LAMB2P55268 1798 aa13.77□□□□□ -0.21
RN7SL543P-201ENST00000580506 PSMD1Q99460 953 aa13.77□□□□□ -0.21
RN7SL543P-201ENST00000580506 RARSP54136 660 aaKnown RBP13.76□□□□□ -0.21
RN7SL543P-201ENST00000580506 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
RN7SL543P-201ENST00000580506 RPS8P62241 208 aaKnown RBP13.76□□□□□ -0.21
RN7SL543P-201ENST00000580506 CCDC85AQ96PX6 553 aaPredicted RBP13.76□□□□□ -0.21
RN7SL543P-201ENST00000580506 PLA2G12BQ9BX93 195 aa13.76□□□□□ -0.21
RN7SL543P-201ENST00000580506 GPBP1L1Q9HC44 474 aaPredicted RBP13.76□□□□□ -0.21
RN7SL543P-201ENST00000580506 CACNA1FO60840 1977 aa13.76□□□□□ -0.21
RN7SL543P-201ENST00000580506 ZC3H4Q9UPT8 1303 aaKnown RBP13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 KIF3CO14782 793 aa13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 ALDH1L1O75891 902 aa13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 CSF1RP07333 972 aa13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 HSP90B1P14625 803 aaKnown RBP13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 CTSWP56202 376 aa13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 GRIPAP1Q4V328 841 aa13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 SLC4A10Q6U841 1118 aa13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 RTFDC1Q9BY42 306 aaPredicted RBP13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 NMRK2Q9NPI5 230 aa13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 SMC4Q9NTJ3 1288 aa13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 CACNA1SQ13698 1873 aa13.75□□□□□ -0.21
RN7SL543P-201ENST00000580506 TAF1P21675 1872 aa13.74□□□□□ -0.21
RN7SL543P-201ENST00000580506 PTPRCP08575 1304 aa13.74□□□□□ -0.21
RN7SL543P-201ENST00000580506 GLTPD2A6NH11 291 aa13.74□□□□□ -0.21
RN7SL543P-201ENST00000580506 IARSP41252 1262 aaKnown RBP13.74□□□□□ -0.21
RN7SL543P-201ENST00000580506 FOXO4P98177 505 aa13.74□□□□□ -0.21
RN7SL543P-201ENST00000580506 CCDC152Q4G0S7 254 aa13.74□□□□□ -0.21
RN7SL543P-201ENST00000580506 EPHA10Q5JZY3 1008 aa13.74□□□□□ -0.21
RN7SL543P-201ENST00000580506 SRCIN1Q9C0H9 1055 aa13.74□□□□□ -0.21
RN7SL543P-201ENST00000580506 GREM2Q9H772 168 aa13.74□□□□□ -0.21
RN7SL543P-201ENST00000580506 NOB1Q9ULX3 412 aaKnown RBP13.74□□□□□ -0.21
RN7SL543P-201ENST00000580506 COL4A5P29400 1685 aa13.73□□□□□ -0.21
RN7SL543P-201ENST00000580506 ZBED9Q6R2W3 1325 aa13.73□□□□□ -0.21
RN7SL543P-201ENST00000580506 POTECB2RU33 542 aa13.73□□□□□ -0.21
RN7SL543P-201ENST00000580506 TMC4Q7Z404 712 aa13.73□□□□□ -0.21
RN7SL543P-201ENST00000580506 MPNDQ8N594 471 aa13.73□□□□□ -0.21
RN7SL543P-201ENST00000580506 KAZALD1Q96I82 304 aa13.73□□□□□ -0.21
RN7SL543P-201ENST00000580506 RTL9Q8NET4 1388 aa13.72□□□□□ -0.21
RN7SL543P-201ENST00000580506 FZD9O00144 591 aa13.72□□□□□ -0.21
RN7SL543P-201ENST00000580506 GRM8O00222 908 aa13.72□□□□□ -0.21
RN7SL543P-201ENST00000580506 BCAR3O75815 825 aa13.72□□□□□ -0.21
RN7SL543P-201ENST00000580506 NBPF7P0C2Y1 421 aaPredicted RBP13.72□□□□□ -0.21
RN7SL543P-201ENST00000580506 GPSM2P81274 684 aa13.72□□□□□ -0.21
RN7SL543P-201ENST00000580506 DPP8Q6V1X1 898 aaPredicted RBP13.72□□□□□ -0.21
RN7SL543P-201ENST00000580506 RRAGCQ9HB90 399 aa13.72□□□□□ -0.21
RN7SL543P-201ENST00000580506 UTYO14607 1347 aa13.71□□□□□ -0.21
RN7SL543P-201ENST00000580506 WTIPA6NIX2 430 aaPredicted RBP13.71□□□□□ -0.21
RN7SL543P-201ENST00000580506 USP44Q9H0E7 712 aa13.71□□□□□ -0.21
RN7SL543P-201ENST00000580506 POLLQ9UGP5 575 aa13.71□□□□□ -0.21
RN7SL543P-201ENST00000580506 ZNF541Q9H0D2 1346 aa13.7□□□□□ -0.22
RN7SL543P-201ENST00000580506 CCDC88AQ3V6T2 1871 aa13.7□□□□□ -0.22
RN7SL543P-201ENST00000580506 DDNO94850 711 aaPredicted RBP13.7□□□□□ -0.22
RN7SL543P-201ENST00000580506 FAM161AQ3B820 660 aa13.7□□□□□ -0.22
RN7SL543P-201ENST00000580506 TMX4Q9H1E5 349 aaPredicted RBP13.7□□□□□ -0.22
RN7SL543P-201ENST00000580506 C9orf78Q9NZ63 289 aaPredicted RBP13.7□□□□□ -0.22
RN7SL543P-201ENST00000580506 NSFL1CQ9UNZ2 370 aaKnown RBP13.7□□□□□ -0.22
RN7SL543P-201ENST00000580506 KDM2BQ8NHM5 1336 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 ITGA6P23229 1130 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 KIAA2012Q0VF49 1180 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 AOC3Q16853 763 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 LMBR1LQ6UX01 489 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 ANKRD18AQ8IVF6 992 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 LARGE2Q8N3Y3 721 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 SUPT20HQ8NEM7 779 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 TBC1D16Q8TBP0 767 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 ARHGAP45Q92619 1136 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 SUCLG2Q96I99 432 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 VPS33BQ9H267 617 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 BSDC1Q9NW68 430 aaPredicted RBP13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 PODXL2Q9NZ53 605 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 TNNQ9UQP3 1299 aa13.69□□□□□ -0.22
RN7SL543P-201ENST00000580506 DUOX1Q9NRD9 1551 aa13.68□□□□□ -0.22
RN7SL543P-201ENST00000580506 PPIP5K2O43314 1243 aa13.68□□□□□ -0.22
RN7SL543P-201ENST00000580506 C1QTNF8P60827 252 aa13.68□□□□□ -0.22
RN7SL543P-201ENST00000580506 DPY19L2Q6NUT2 758 aa13.68□□□□□ -0.22
RN7SL543P-201ENST00000580506 GPR101Q96P66 508 aaPredicted RBP13.68□□□□□ -0.22
RN7SL543P-201ENST00000580506 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
RN7SL543P-201ENST00000580506 MINPP1Q9UNW1 487 aa13.68□□□□□ -0.22
RN7SL543P-201ENST00000580506 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
RN7SL543P-201ENST00000580506 ANKRD44Q8N8A2 993 aa13.67□□□□□ -0.22
RN7SL543P-201ENST00000580506 JDP2Q8WYK2 163 aa13.67□□□□□ -0.22
RN7SL543P-201ENST00000580506 API5Q9BZZ5 524 aaKnown RBP13.67□□□□□ -0.22
RN7SL543P-201ENST00000580506 LRRC37AA6NMS7 1700 aa13.67□□□□□ -0.22
RN7SL543P-201ENST00000580506 YDJCA8MPS7 323 aa13.66□□□□□ -0.22
RN7SL543P-201ENST00000580506 C6orf229H3BNL8 230 aa13.66□□□□□ -0.22
RN7SL543P-201ENST00000580506 VEGFAP15692 232 aaPredicted RBP13.66□□□□□ -0.22
RN7SL543P-201ENST00000580506 CXCL9Q07325 125 aa13.66□□□□□ -0.22
RN7SL543P-201ENST00000580506 WASHC4Q2M389 1173 aa13.66□□□□□ -0.22
RN7SL543P-201ENST00000580506 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
RN7SL543P-201ENST00000580506 ZNRF3Q9ULT6 936 aa13.66□□□□□ -0.22
RN7SL543P-201ENST00000580506 TIAM2Q8IVF5 1701 aa13.66□□□□□ -0.22
RN7SL543P-201ENST00000580506 ANKRD18BA2A2Z9 1011 aa13.65□□□□□ -0.22
RN7SL543P-201ENST00000580506 RIMBP2O15034 1052 aa13.65□□□□□ -0.22
RN7SL543P-201ENST00000580506 TRIM27P14373 513 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms