RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 GJA3Q9Y6H8 435 aa31.94■■■□□ 2.7
CDC42EP4-205ENST00000580315 TCERG1O14776 1098 aaKnown RBP31.92■■■□□ 2.7
CDC42EP4-205ENST00000580315 PPEF1O14829 653 aaPredicted RBP31.92■■■□□ 2.7
CDC42EP4-205ENST00000580315 FOXN1O15353 648 aa31.92■■■□□ 2.7
CDC42EP4-205ENST00000580315 DDX58O95786 925 aaKnown RBP31.92■■■□□ 2.7
CDC42EP4-205ENST00000580315 LARGE2Q8N3Y3 721 aa31.92■■■□□ 2.7
CDC42EP4-205ENST00000580315 DIEXFQ68CQ4 756 aaKnown RBP31.91■■■□□ 2.7
CDC42EP4-205ENST00000580315 TRMT112Q9UI30 125 aaKnown RBP31.91■■■□□ 2.7
CDC42EP4-205ENST00000580315 NLRP3Q96P20 1036 aa31.9■■■□□ 2.7
CDC42EP4-205ENST00000580315 EXOSC9Q06265 439 aaKnown RBP31.89■■■□□ 2.7
CDC42EP4-205ENST00000580315 SLC10A5Q5PT55 438 aa31.89■■■□□ 2.7
CDC42EP4-205ENST00000580315 ISCA1Q9BUE6 129 aa31.89■■■□□ 2.7
CDC42EP4-205ENST00000580315 LMOD1P29536 600 aaPredicted RBP31.88■■■□□ 2.69
CDC42EP4-205ENST00000580315 SPINK5Q9NQ38 1064 aaPredicted RBP31.88■■■□□ 2.69
CDC42EP4-205ENST00000580315 ANKRD36CQ5JPF3 1778 aa31.87■■■□□ 2.69
CDC42EP4-205ENST00000580315 SH3TC1Q8TE82 1336 aa31.87■■■□□ 2.69
CDC42EP4-205ENST00000580315 SCNN1DP51172 638 aa31.87■■■□□ 2.69
CDC42EP4-205ENST00000580315 ZNF521Q96K83 1311 aa31.86■■■□□ 2.69
CDC42EP4-205ENST00000580315 RASSF10A6NK89 507 aa31.86■■■□□ 2.69
CDC42EP4-205ENST00000580315 ATP5J2-PTCD1G3V325 749 aa31.86■■■□□ 2.69
CDC42EP4-205ENST00000580315 EPS15P42566 896 aa31.86■■■□□ 2.69
CDC42EP4-205ENST00000580315 SLC4A2P04920 1241 aa31.85■■■□□ 2.69
CDC42EP4-205ENST00000580315 TRIM28Q13263 835 aaKnown RBP31.85■■■□□ 2.69
CDC42EP4-205ENST00000580315 DEFB115Q30KQ5 88 aa31.85■■■□□ 2.69
CDC42EP4-205ENST00000580315 NIM1KQ8IY84 436 aa31.85■■■□□ 2.69
CDC42EP4-205ENST00000580315 AIDAQ96BJ3 306 aa31.85■■■□□ 2.69
CDC42EP4-205ENST00000580315 PRDM10Q9NQV6 1147 aa31.85■■■□□ 2.69
CDC42EP4-205ENST00000580315 ATP6V0A2Q9Y487 856 aa31.85■■■□□ 2.69
CDC42EP4-205ENST00000580315 LTBP1Q14766 1721 aa31.84■■■□□ 2.69
CDC42EP4-205ENST00000580315 TMX4Q9H1E5 349 aaPredicted RBP31.84■■■□□ 2.69
CDC42EP4-205ENST00000580315 WBP1LQ9NX94 342 aa31.84■■■□□ 2.69
CDC42EP4-205ENST00000580315 PPIP5K2O43314 1243 aa31.83■■■□□ 2.69
CDC42EP4-205ENST00000580315 VAMP4O75379 141 aa31.83■■■□□ 2.69
CDC42EP4-205ENST00000580315 CTCFP49711 727 aaPredicted RBP31.83■■■□□ 2.69
CDC42EP4-205ENST00000580315 MYD88Q99836 296 aa31.83■■■□□ 2.69
CDC42EP4-205ENST00000580315 AOC3Q16853 763 aa31.82■■■□□ 2.68
CDC42EP4-205ENST00000580315 ABCC4O15439 1325 aa31.81■■■□□ 2.68
CDC42EP4-205ENST00000580315 HCLS1P14317 486 aaPredicted RBP31.81■■■□□ 2.68
CDC42EP4-205ENST00000580315 KSR2Q6VAB6 950 aa31.81■■■□□ 2.68
CDC42EP4-205ENST00000580315 METTL22Q9BUU2 404 aaPredicted RBP31.81■■■□□ 2.68
CDC42EP4-205ENST00000580315 VPS33BQ9H267 617 aa31.81■■■□□ 2.68
CDC42EP4-205ENST00000580315 ABT1Q9ULW3 272 aaKnown RBP31.81■■■□□ 2.68
CDC42EP4-205ENST00000580315 USP50Q70EL3 339 aaPredicted RBP31.8■■■□□ 2.68
CDC42EP4-205ENST00000580315 MAP3K2Q9Y2U5 619 aa31.8■■■□□ 2.68
CDC42EP4-205ENST00000580315 ZNF428Q96B54 188 aa31.79■■■□□ 2.68
CDC42EP4-205ENST00000580315 RTFDC1Q9BY42 306 aaPredicted RBP31.79■■■□□ 2.68
CDC42EP4-205ENST00000580315 PI4KAP2A4QPH2 592 aa31.78■■■□□ 2.68
CDC42EP4-205ENST00000580315 E9PSI1 815 aa31.78■■■□□ 2.68
CDC42EP4-205ENST00000580315 BBOX1O75936 387 aa31.78■■■□□ 2.68
CDC42EP4-205ENST00000580315 FMR1Q06787 632 aaKnown RBP eCLIP31.78■■■□□ 2.68
CDC42EP4-205ENST00000580315 PI4KAP1Q8N8J0 262 aa31.78■■■□□ 2.68
CDC42EP4-205ENST00000580315 CCDC191Q8NCU4 936 aa31.78■■■□□ 2.68
CDC42EP4-205ENST00000580315 FAM89AQ96GI7 184 aa31.78■■■□□ 2.68
CDC42EP4-205ENST00000580315 WDR33Q9C0J8 1336 aaKnown RBP31.77■■■□□ 2.68
CDC42EP4-205ENST00000580315 NEXNQ0ZGT2 675 aa31.77■■■□□ 2.68
CDC42EP4-205ENST00000580315 G2E3Q7L622 706 aa31.77■■■□□ 2.68
CDC42EP4-205ENST00000580315 SUPT20HQ8NEM7 779 aa31.77■■■□□ 2.68
CDC42EP4-205ENST00000580315 ZNRF3Q9ULT6 936 aa31.77■■■□□ 2.68
CDC42EP4-205ENST00000580315 HSP90B1P14625 803 aaKnown RBP31.76■■■□□ 2.67
CDC42EP4-205ENST00000580315 FLIIQ13045 1269 aa31.76■■■□□ 2.67
CDC42EP4-205ENST00000580315 SP8Q8IXZ3 490 aa31.76■■■□□ 2.67
CDC42EP4-205ENST00000580315 MIER1Q8N108 512 aa31.76■■■□□ 2.67
CDC42EP4-205ENST00000580315 CWC25Q9NXE8 425 aaPredicted RBP31.76■■■□□ 2.67
CDC42EP4-205ENST00000580315 GPRC5DQ9NZD1 345 aa31.76■■■□□ 2.67
CDC42EP4-205ENST00000580315 LBX1P52954 281 aa31.75■■■□□ 2.67
CDC42EP4-205ENST00000580315 CXCL9Q07325 125 aa31.75■■■□□ 2.67
CDC42EP4-205ENST00000580315 DPP8Q6V1X1 898 aaPredicted RBP31.74■■■□□ 2.67
CDC42EP4-205ENST00000580315 DDX46Q7L014 1031 aaKnown RBP31.74■■■□□ 2.67
CDC42EP4-205ENST00000580315 ZBTB38Q8NAP3 1195 aaPredicted RBP31.74■■■□□ 2.67
CDC42EP4-205ENST00000580315 ADARB2Q9NS39 739 aaKnown RBP31.74■■■□□ 2.67
CDC42EP4-205ENST00000580315 TRAF5O00463 557 aa31.73■■■□□ 2.67
CDC42EP4-205ENST00000580315 MAP2K1Q02750 393 aaPredicted RBP31.73■■■□□ 2.67
CDC42EP4-205ENST00000580315 FKBP5Q13451 457 aaPredicted RBP31.73■■■□□ 2.67
CDC42EP4-205ENST00000580315 RTL5Q5HYW3 569 aaPredicted RBP31.73■■■□□ 2.67
CDC42EP4-205ENST00000580315 MPNDQ8N594 471 aa31.73■■■□□ 2.67
CDC42EP4-205ENST00000580315 IRS4O14654 1257 aaPredicted RBP31.72■■■□□ 2.67
CDC42EP4-205ENST00000580315 CST9Q5W186 159 aa31.72■■■□□ 2.67
CDC42EP4-205ENST00000580315 PCCAP05165 728 aaPredicted RBP31.7■■■□□ 2.67
CDC42EP4-205ENST00000580315 KIAA2012Q0VF49 1180 aa31.7■■■□□ 2.67
CDC42EP4-205ENST00000580315 GRAPQ13588 217 aa31.7■■■□□ 2.67
CDC42EP4-205ENST00000580315 GRAPLQ8TC17 118 aaPredicted RBP31.7■■■□□ 2.67
CDC42EP4-205ENST00000580315 HSPA8P11142 646 aaKnown RBP31.69■■■□□ 2.66
CDC42EP4-205ENST00000580315 GMPSP49915 693 aaPredicted RBP31.69■■■□□ 2.66
CDC42EP4-205ENST00000580315 SLFN5Q08AF3 891 aa31.69■■■□□ 2.66
CDC42EP4-205ENST00000580315 CAPNS2Q96L46 248 aa31.69■■■□□ 2.66
CDC42EP4-205ENST00000580315 SF3B3Q15393 1217 aaKnown RBP31.68■■■□□ 2.66
CDC42EP4-205ENST00000580315 CIAPIN1Q6FI81 312 aa31.68■■■□□ 2.66
CDC42EP4-205ENST00000580315 LAMB2P55268 1798 aa31.67■■■□□ 2.66
CDC42EP4-205ENST00000580315 IGKV5-2P06315 115 aa31.67■■■□□ 2.66
CDC42EP4-205ENST00000580315 PAXIP1Q6ZW49 1069 aaPredicted RBP31.67■■■□□ 2.66
CDC42EP4-205ENST00000580315 DNAAF4Q8WXU2 420 aa31.67■■■□□ 2.66
CDC42EP4-205ENST00000580315 RAD17O75943 681 aa31.66■■■□□ 2.66
CDC42EP4-205ENST00000580315 ECE1P42892 770 aa31.66■■■□□ 2.66
CDC42EP4-205ENST00000580315 CYP4F22Q6NT55 531 aa31.66■■■□□ 2.66
CDC42EP4-205ENST00000580315 TLL2Q9Y6L7 1015 aa31.66■■■□□ 2.66
CDC42EP4-205ENST00000580315 NEURL1BA8MQ27 555 aa31.64■■■□□ 2.66
CDC42EP4-205ENST00000580315 TNIP1Q15025 636 aa31.64■■■□□ 2.66
CDC42EP4-205ENST00000580315 TMC4Q7Z404 712 aa31.64■■■□□ 2.66
CDC42EP4-205ENST00000580315 GPR101Q96P66 508 aaPredicted RBP31.64■■■□□ 2.66
CDC42EP4-205ENST00000580315 PGAP2Q9UHJ9 254 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms