RNA–Protein interactions for RNA: ENST00000580218.5

DHX40-208, Transcript of DEAH-box helicase 40, humanhuman

TSL 5

Gene DHX40, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-208ENST00000580218 NLRP3Q96P20 1036 aa17.12■□□□□ 0.33
DHX40-208ENST00000580218 SMC4Q9NTJ3 1288 aa17.12■□□□□ 0.33
DHX40-208ENST00000580218 LTBP3Q9NS15 1303 aa17.11■□□□□ 0.33
DHX40-208ENST00000580218 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
DHX40-208ENST00000580218 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
DHX40-208ENST00000580218 RPGRQ92834 1020 aaKnown RBP17.1■□□□□ 0.33
DHX40-208ENST00000580218 RTL9Q8NET4 1388 aa17.1■□□□□ 0.33
DHX40-208ENST00000580218 BCAR3O75815 825 aa17.09■□□□□ 0.33
DHX40-208ENST00000580218 ARHGAP27Q6ZUM4 889 aa17.09■□□□□ 0.33
DHX40-208ENST00000580218 KAZALD1Q96I82 304 aa17.09■□□□□ 0.33
DHX40-208ENST00000580218 PLA2G12BQ9BX93 195 aa17.09■□□□□ 0.33
DHX40-208ENST00000580218 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
DHX40-208ENST00000580218 TNNQ9UQP3 1299 aa17.09■□□□□ 0.33
DHX40-208ENST00000580218 UTYO14607 1347 aa17.09■□□□□ 0.33
DHX40-208ENST00000580218 YY1P25490 414 aa17.08■□□□□ 0.32
DHX40-208ENST00000580218 ALDH1B1P30837 517 aa17.08■□□□□ 0.32
DHX40-208ENST00000580218 CTSWP56202 376 aa17.08■□□□□ 0.32
DHX40-208ENST00000580218 CELF1Q92879 486 aaKnown RBP17.08■□□□□ 0.32
DHX40-208ENST00000580218 NOB1Q9ULX3 412 aaKnown RBP17.08■□□□□ 0.32
DHX40-208ENST00000580218 ZNF646O15015 1829 aaPredicted RBP17.07■□□□□ 0.32
DHX40-208ENST00000580218 PPEF1O14829 653 aaPredicted RBP17.07■□□□□ 0.32
DHX40-208ENST00000580218 PDE8AO60658 829 aa17.07■□□□□ 0.32
DHX40-208ENST00000580218 ALDH1L1O75891 902 aa17.07■□□□□ 0.32
DHX40-208ENST00000580218 GRAPQ13588 217 aa17.07■□□□□ 0.32
DHX40-208ENST00000580218 EPHA10Q5JZY3 1008 aa17.07■□□□□ 0.32
DHX40-208ENST00000580218 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
DHX40-208ENST00000580218 GRAPLQ8TC17 118 aaPredicted RBP17.07■□□□□ 0.32
DHX40-208ENST00000580218 RBM17Q96I25 401 aaKnown RBP17.07■□□□□ 0.32
DHX40-208ENST00000580218 SEC31BQ9NQW1 1179 aa17.07■□□□□ 0.32
DHX40-208ENST00000580218 KIF16BQ96L93 1317 aa17.06■□□□□ 0.32
DHX40-208ENST00000580218 GRM8O00222 908 aa17.06■□□□□ 0.32
DHX40-208ENST00000580218 FOXO4P98177 505 aa17.06■□□□□ 0.32
DHX40-208ENST00000580218 CCDC93Q567U6 631 aa17.06■□□□□ 0.32
DHX40-208ENST00000580218 ATP6V0A2Q9Y487 856 aa17.06■□□□□ 0.32
DHX40-208ENST00000580218 CSF1RP07333 972 aa17.05■□□□□ 0.32
DHX40-208ENST00000580218 NBPF7P0C2Y1 421 aaPredicted RBP17.05■□□□□ 0.32
DHX40-208ENST00000580218 C9orf131Q5VYM1 1079 aa17.05■□□□□ 0.32
DHX40-208ENST00000580218 SLC4A10Q6U841 1118 aa17.05■□□□□ 0.32
DHX40-208ENST00000580218 SRCIN1Q9C0H9 1055 aa17.05■□□□□ 0.32
DHX40-208ENST00000580218 GREM2Q9H772 168 aa17.05■□□□□ 0.32
DHX40-208ENST00000580218 TRIM27P14373 513 aa17.04■□□□□ 0.32
DHX40-208ENST00000580218 ZNF784Q8NCA9 323 aaPredicted RBP17.04■□□□□ 0.32
DHX40-208ENST00000580218 ARHGAP45Q92619 1136 aa17.04■□□□□ 0.32
DHX40-208ENST00000580218 TAOK3Q9H2K8 898 aa17.04■□□□□ 0.32
DHX40-208ENST00000580218 LMNB1P20700 586 aa17.03■□□□□ 0.32
DHX40-208ENST00000580218 FKBP4Q02790 459 aaKnown RBP eCLIP17.03■□□□□ 0.32
DHX40-208ENST00000580218 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
DHX40-208ENST00000580218 SOGA3Q5TF21 947 aa17.03■□□□□ 0.32
DHX40-208ENST00000580218 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
DHX40-208ENST00000580218 CCDC85AQ96PX6 553 aaPredicted RBP17.03■□□□□ 0.32
DHX40-208ENST00000580218 PSMD1Q99460 953 aa17.03■□□□□ 0.32
DHX40-208ENST00000580218 USP44Q9H0E7 712 aa17.03■□□□□ 0.32
DHX40-208ENST00000580218 RNF181Q9P0P0 153 aa17.03■□□□□ 0.32
DHX40-208ENST00000580218 WDR90Q96KV7 1748 aa17.02■□□□□ 0.32
DHX40-208ENST00000580218 SP8Q8IXZ3 490 aa17.02■□□□□ 0.32
DHX40-208ENST00000580218 SUCLG2Q96I99 432 aa17.02■□□□□ 0.32
DHX40-208ENST00000580218 RTFDC1Q9BY42 306 aaPredicted RBP17.02■□□□□ 0.32
DHX40-208ENST00000580218 PSME4Q14997 1843 aa17.02■□□□□ 0.31
DHX40-208ENST00000580218 SCN9AQ15858 1988 aa17.01■□□□□ 0.31
DHX40-208ENST00000580218 BBOX1O75936 387 aa17.01■□□□□ 0.31
DHX40-208ENST00000580218 CCDC152Q4G0S7 254 aa17.01■□□□□ 0.31
DHX40-208ENST00000580218 ANKRD44Q8N8A2 993 aa17.01■□□□□ 0.31
DHX40-208ENST00000580218 RABL6Q3YEC7 729 aaPredicted RBP17■□□□□ 0.31
DHX40-208ENST00000580218 INTS3Q68E01 1043 aaKnown RBP17■□□□□ 0.31
DHX40-208ENST00000580218 CC2D2BQ6DHV5 1058 aa17■□□□□ 0.31
DHX40-208ENST00000580218 ATF7IPQ6VMQ6 1270 aa17■□□□□ 0.31
DHX40-208ENST00000580218 RTKN2Q8IZC4 609 aa17■□□□□ 0.31
DHX40-208ENST00000580218 API5Q9BZZ5 524 aaKnown RBP17■□□□□ 0.31
DHX40-208ENST00000580218 ZNF277Q9NRM2 450 aaPredicted RBP17■□□□□ 0.31
DHX40-208ENST00000580218 ZC3H4Q9UPT8 1303 aaKnown RBP16.99■□□□□ 0.31
DHX40-208ENST00000580218 HSP90B1P14625 803 aaKnown RBP16.99■□□□□ 0.31
DHX40-208ENST00000580218 RPS8P62241 208 aaKnown RBP16.99■□□□□ 0.31
DHX40-208ENST00000580218 RLBP1P12271 317 aa16.98■□□□□ 0.31
DHX40-208ENST00000580218 TMC4Q7Z404 712 aa16.98■□□□□ 0.31
DHX40-208ENST00000580218 WTIPA6NIX2 430 aaPredicted RBP16.97■□□□□ 0.31
DHX40-208ENST00000580218 ITGA6P23229 1130 aa16.97■□□□□ 0.31
DHX40-208ENST00000580218 IARSP41252 1262 aaKnown RBP16.97■□□□□ 0.31
DHX40-208ENST00000580218 CCT4P50991 539 aaKnown RBP16.97■□□□□ 0.31
DHX40-208ENST00000580218 GPSM2P81274 684 aa16.97■□□□□ 0.31
DHX40-208ENST00000580218 MEIS3Q99687 375 aa16.97■□□□□ 0.31
DHX40-208ENST00000580218 BICC1Q9H694 974 aaKnown RBP16.97■□□□□ 0.31
DHX40-208ENST00000580218 C9orf78Q9NZ63 289 aaPredicted RBP16.97■□□□□ 0.31
DHX40-208ENST00000580218 LMBR1LQ6UX01 489 aa16.96■□□□□ 0.31
DHX40-208ENST00000580218 PODXL2Q9NZ53 605 aa16.96■□□□□ 0.31
DHX40-208ENST00000580218 POLLQ9UGP5 575 aa16.96■□□□□ 0.31
DHX40-208ENST00000580218 ZNF541Q9H0D2 1346 aa16.96■□□□□ 0.3
DHX40-208ENST00000580218 ADAMTSL1Q8N6G6 1762 aa16.95■□□□□ 0.3
DHX40-208ENST00000580218 GRIPAP1Q4V328 841 aa16.95■□□□□ 0.3
DHX40-208ENST00000580218 FRAT1Q92837 279 aaPredicted RBP16.95■□□□□ 0.3
DHX40-208ENST00000580218 IRS2Q9Y4H2 1338 aa16.95■□□□□ 0.3
DHX40-208ENST00000580218 ZKSCAN2Q63HK3 967 aa16.94■□□□□ 0.3
DHX40-208ENST00000580218 MPNDQ8N594 471 aa16.94■□□□□ 0.3
DHX40-208ENST00000580218 TMEM57Q8N5G2 664 aa16.94■□□□□ 0.3
DHX40-208ENST00000580218 CLUAP1Q96AJ1 413 aa16.94■□□□□ 0.3
DHX40-208ENST00000580218 GPR101Q96P66 508 aaPredicted RBP16.94■□□□□ 0.3
DHX40-208ENST00000580218 CDC5LQ99459 802 aaKnown RBP16.94■□□□□ 0.3
DHX40-208ENST00000580218 BSDC1Q9NW68 430 aaPredicted RBP16.94■□□□□ 0.3
DHX40-208ENST00000580218 SCN4AP35499 1836 aa16.93■□□□□ 0.3
DHX40-208ENST00000580218 FZD9O00144 591 aa16.93■□□□□ 0.3
DHX40-208ENST00000580218 RFX5P48382 616 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms