RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 USP50Q70EL3 339 aaPredicted RBP17.69■□□□□ 0.42
GGA3-208ENST00000579743 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
GGA3-208ENST00000579743 MKRN1Q9UHC7 482 aaKnown RBP17.69■□□□□ 0.42
GGA3-208ENST00000579743 PASKQ96RG2 1323 aa17.69■□□□□ 0.42
GGA3-208ENST00000579743 KIAA2012Q0VF49 1180 aa17.68■□□□□ 0.42
GGA3-208ENST00000579743 SF3B3Q15393 1217 aaKnown RBP17.68■□□□□ 0.42
GGA3-208ENST00000579743 IRS4O14654 1257 aaPredicted RBP17.67■□□□□ 0.42
GGA3-208ENST00000579743 ITGBL1O95965 494 aaPredicted RBP17.67■□□□□ 0.42
GGA3-208ENST00000579743 HSPA1AP0DMV8 641 aaKnown RBP17.67■□□□□ 0.42
GGA3-208ENST00000579743 HSPA1BP0DMV9 641 aaKnown RBP17.67■□□□□ 0.42
GGA3-208ENST00000579743 MAP1SQ66K74 1059 aaPredicted RBP17.67■□□□□ 0.42
GGA3-208ENST00000579743 CIAPIN1Q6FI81 312 aa17.67■□□□□ 0.42
GGA3-208ENST00000579743 BCL2L13Q9BXK5 485 aa17.67■□□□□ 0.42
GGA3-208ENST00000579743 STK31Q9BXU1 1019 aa17.67■□□□□ 0.42
GGA3-208ENST00000579743 ZBTB38Q8NAP3 1195 aaPredicted RBP17.66■□□□□ 0.42
GGA3-208ENST00000579743 CCDC191Q8NCU4 936 aa17.66■□□□□ 0.42
GGA3-208ENST00000579743 EYA3Q99504 573 aa17.66■□□□□ 0.42
GGA3-208ENST00000579743 ADARB2Q9NS39 739 aaKnown RBP17.66■□□□□ 0.42
GGA3-208ENST00000579743 NSFL1CQ9UNZ2 370 aaKnown RBP17.66■□□□□ 0.42
GGA3-208ENST00000579743 CDHR2Q9BYE9 1310 aa17.66■□□□□ 0.42
GGA3-208ENST00000579743 EPS15P42566 896 aa17.65■□□□□ 0.42
GGA3-208ENST00000579743 SCNN1DP51172 638 aa17.65■□□□□ 0.42
GGA3-208ENST00000579743 WASHC4Q2M389 1173 aa17.65■□□□□ 0.42
GGA3-208ENST00000579743 RTL5Q5HYW3 569 aaPredicted RBP17.65■□□□□ 0.42
GGA3-208ENST00000579743 AIDAQ96BJ3 306 aa17.65■□□□□ 0.42
GGA3-208ENST00000579743 MYD88Q99836 296 aa17.65■□□□□ 0.42
GGA3-208ENST00000579743 ABT1Q9ULW3 272 aaKnown RBP17.65■□□□□ 0.42
GGA3-208ENST00000579743 CNTNAP1P78357 1384 aa17.65■□□□□ 0.42
GGA3-208ENST00000579743 C6orf229H3BNL8 230 aa17.64■□□□□ 0.41
GGA3-208ENST00000579743 ANP32CO43423 234 aa17.64■□□□□ 0.41
GGA3-208ENST00000579743 CXCL9Q07325 125 aa17.64■□□□□ 0.41
GGA3-208ENST00000579743 NEXNQ0ZGT2 675 aa17.64■□□□□ 0.41
GGA3-208ENST00000579743 CCDC27Q2M243 656 aa17.64■□□□□ 0.41
GGA3-208ENST00000579743 ZNF428Q96B54 188 aa17.64■□□□□ 0.41
GGA3-208ENST00000579743 PHAXQ9H814 394 aaKnown RBP17.64■□□□□ 0.41
GGA3-208ENST00000579743 CWC25Q9NXE8 425 aaPredicted RBP17.64■□□□□ 0.41
GGA3-208ENST00000579743 GPRC5DQ9NZD1 345 aa17.64■□□□□ 0.41
GGA3-208ENST00000579743 LAMB2P55268 1798 aa17.63■□□□□ 0.41
GGA3-208ENST00000579743 G3V3G9 751 aa17.63■□□□□ 0.41
GGA3-208ENST00000579743 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
GGA3-208ENST00000579743 DEFB115Q30KQ5 88 aa17.63■□□□□ 0.41
GGA3-208ENST00000579743 CCDC152Q4G0S7 254 aa17.63■□□□□ 0.41
GGA3-208ENST00000579743 DCAF8Q5TAQ9 597 aa17.63■□□□□ 0.41
GGA3-208ENST00000579743 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
GGA3-208ENST00000579743 H7C1D1 291 aa17.62■□□□□ 0.41
GGA3-208ENST00000579743 PCCAP05165 728 aaPredicted RBP17.62■□□□□ 0.41
GGA3-208ENST00000579743 GMPSP49915 693 aaPredicted RBP17.62■□□□□ 0.41
GGA3-208ENST00000579743 TNS4Q8IZW8 715 aa17.62■□□□□ 0.41
GGA3-208ENST00000579743 METTL22Q9BUU2 404 aaPredicted RBP17.62■□□□□ 0.41
GGA3-208ENST00000579743 COL4A5P29400 1685 aa17.61■□□□□ 0.41
GGA3-208ENST00000579743 PDE8AO60658 829 aa17.61■□□□□ 0.41
GGA3-208ENST00000579743 RAD17O75943 681 aa17.61■□□□□ 0.41
GGA3-208ENST00000579743 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
GGA3-208ENST00000579743 COL13A1Q5TAT6 717 aaPredicted RBP17.61■□□□□ 0.41
GGA3-208ENST00000579743 CELF1Q92879 486 aaKnown RBP17.61■□□□□ 0.41
GGA3-208ENST00000579743 MRS2Q9HD23 443 aa17.61■□□□□ 0.41
GGA3-208ENST00000579743 KSR2Q6VAB6 950 aa17.6■□□□□ 0.41
GGA3-208ENST00000579743 WWC1Q8IX03 1113 aa17.6■□□□□ 0.41
GGA3-208ENST00000579743 ZC3H15Q8WU90 426 aaKnown RBP17.6■□□□□ 0.41
GGA3-208ENST00000579743 ZC3H12CQ9C0D7 883 aaKnown RBP17.6■□□□□ 0.41
GGA3-208ENST00000579743 ANKIB1Q9P2G1 1089 aa17.6■□□□□ 0.41
GGA3-208ENST00000579743 IL16Q14005 1332 aa17.6■□□□□ 0.41
GGA3-208ENST00000579743 ADAMTSL1Q8N6G6 1762 aa17.6■□□□□ 0.41
GGA3-208ENST00000579743 RASSF10A6NK89 507 aa17.59■□□□□ 0.41
GGA3-208ENST00000579743 RIMBP2O15034 1052 aa17.59■□□□□ 0.41
GGA3-208ENST00000579743 ECE1P42892 770 aa17.59■□□□□ 0.41
GGA3-208ENST00000579743 VEGFBP49765 207 aa17.59■□□□□ 0.41
GGA3-208ENST00000579743 PAXIP1Q6ZW49 1069 aaPredicted RBP17.59■□□□□ 0.41
GGA3-208ENST00000579743 SLC51AQ86UW1 340 aa17.59■□□□□ 0.41
GGA3-208ENST00000579743 CNOT7Q9UIV1 285 aaKnown RBP17.59■□□□□ 0.41
GGA3-208ENST00000579743 MAP3K2Q9Y2U5 619 aa17.59■□□□□ 0.41
GGA3-208ENST00000579743 DDX60Q8IY21 1712 aaKnown RBP17.58■□□□□ 0.41
GGA3-208ENST00000579743 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
GGA3-208ENST00000579743 GPSM2P81274 684 aa17.58■□□□□ 0.4
GGA3-208ENST00000579743 MAP2K1Q02750 393 aaPredicted RBP17.58■□□□□ 0.4
GGA3-208ENST00000579743 TWISTNBQ3B726 338 aaPredicted RBP17.58■□□□□ 0.4
GGA3-208ENST00000579743 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
GGA3-208ENST00000579743 TSR2Q969E8 191 aaKnown RBP17.58■□□□□ 0.4
GGA3-208ENST00000579743 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.4
GGA3-208ENST00000579743 PI4KAP2A4QPH2 592 aa17.57■□□□□ 0.4
GGA3-208ENST00000579743 RPS12P25398 132 aaKnown RBP17.57■□□□□ 0.4
GGA3-208ENST00000579743 PI4KAP1Q8N8J0 262 aa17.57■□□□□ 0.4
GGA3-208ENST00000579743 DPF2Q92785 391 aa17.57■□□□□ 0.4
GGA3-208ENST00000579743 BEGAINQ9BUH8 593 aa17.57■□□□□ 0.4
GGA3-208ENST00000579743 GGA1Q9UJY5 639 aa17.57■□□□□ 0.4
GGA3-208ENST00000579743 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
GGA3-208ENST00000579743 CTCFP49711 727 aaPredicted RBP17.56■□□□□ 0.4
GGA3-208ENST00000579743 CDC37L1Q7L3B6 337 aa17.56■□□□□ 0.4
GGA3-208ENST00000579743 TSPYL6Q8N831 410 aa17.56■□□□□ 0.4
GGA3-208ENST00000579743 TBC1D16Q8TBP0 767 aa17.56■□□□□ 0.4
GGA3-208ENST00000579743 DBNDD1Q9H9R9 158 aa17.56■□□□□ 0.4
GGA3-208ENST00000579743 PODXL2Q9NZ53 605 aa17.56■□□□□ 0.4
GGA3-208ENST00000579743 POLLQ9UGP5 575 aa17.56■□□□□ 0.4
GGA3-208ENST00000579743 LRRC37AA6NMS7 1700 aa17.55■□□□□ 0.4
GGA3-208ENST00000579743 WDR33Q9C0J8 1336 aaKnown RBP17.55■□□□□ 0.4
GGA3-208ENST00000579743 ECE2O60344 883 aa17.55■□□□□ 0.4
GGA3-208ENST00000579743 UFL1O94874 794 aa17.55■□□□□ 0.4
GGA3-208ENST00000579743 MICALL2Q8IY33 904 aa17.55■□□□□ 0.4
GGA3-208ENST00000579743 LTBP1Q14766 1721 aa17.55■□□□□ 0.4
GGA3-208ENST00000579743 TAF1P21675 1872 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms