RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 CCDC88AQ3V6T2 1871 aa30.48■■■□□ 2.47
LIMD2-207ENST00000579329 BBOX1O75936 387 aa30.47■■■□□ 2.47
LIMD2-207ENST00000579329 GRIPAP1Q4V328 841 aa30.47■■■□□ 2.47
LIMD2-207ENST00000579329 TMX4Q9H1E5 349 aaPredicted RBP30.47■■■□□ 2.47
LIMD2-207ENST00000579329 SNED1Q8TER0 1413 aa30.47■■■□□ 2.47
LIMD2-207ENST00000579329 PDE8AO60658 829 aa30.46■■■□□ 2.47
LIMD2-207ENST00000579329 CT47B1P0C2W7 299 aaPredicted RBP30.46■■■□□ 2.47
LIMD2-207ENST00000579329 C16orf71Q8IYS4 520 aaPredicted RBP30.46■■■□□ 2.47
LIMD2-207ENST00000579329 MRPL50Q8N5N7 158 aaKnown RBP30.46■■■□□ 2.47
LIMD2-207ENST00000579329 JARID2Q92833 1246 aaPredicted RBP30.46■■■□□ 2.47
LIMD2-207ENST00000579329 TIAM2Q8IVF5 1701 aa30.46■■■□□ 2.47
LIMD2-207ENST00000579329 F6X3S4 739 aa30.45■■■□□ 2.47
LIMD2-207ENST00000579329 ATP6V0A2Q9Y487 856 aa30.45■■■□□ 2.47
LIMD2-207ENST00000579329 HTRA3P83110 453 aa30.44■■■□□ 2.46
LIMD2-207ENST00000579329 GCKRQ14397 625 aa30.44■■■□□ 2.46
LIMD2-207ENST00000579329 ALDH1L2Q3SY69 923 aa30.44■■■□□ 2.46
LIMD2-207ENST00000579329 SSH1Q8WYL5 1049 aa30.44■■■□□ 2.46
LIMD2-207ENST00000579329 DICER1Q9UPY3 1922 aaKnown RBP30.43■■■□□ 2.46
LIMD2-207ENST00000579329 TMC4Q7Z404 712 aa30.43■■■□□ 2.46
LIMD2-207ENST00000579329 PSMD1Q99460 953 aa30.43■■■□□ 2.46
LIMD2-207ENST00000579329 KDM2BQ8NHM5 1336 aa30.42■■■□□ 2.46
LIMD2-207ENST00000579329 H7C1W4 665 aa30.41■■■□□ 2.46
LIMD2-207ENST00000579329 CCDC152Q4G0S7 254 aa30.41■■■□□ 2.46
LIMD2-207ENST00000579329 BEND3Q5T5X7 828 aa30.41■■■□□ 2.46
LIMD2-207ENST00000579329 UBE3BQ7Z3V4 1068 aa30.41■■■□□ 2.46
LIMD2-207ENST00000579329 SP8Q8IXZ3 490 aa30.41■■■□□ 2.46
LIMD2-207ENST00000579329 ZNF277Q9NRM2 450 aaPredicted RBP30.41■■■□□ 2.46
LIMD2-207ENST00000579329 PTPRCP08575 1304 aa30.4■■■□□ 2.46
LIMD2-207ENST00000579329 FSTL1Q12841 308 aa30.39■■■□□ 2.46
LIMD2-207ENST00000579329 SLC51AQ86UW1 340 aa30.39■■■□□ 2.46
LIMD2-207ENST00000579329 CELF1Q92879 486 aaKnown RBP30.39■■■□□ 2.46
LIMD2-207ENST00000579329 BCL2L13Q9BXK5 485 aa30.39■■■□□ 2.46
LIMD2-207ENST00000579329 RRAGCQ9HB90 399 aa30.39■■■□□ 2.46
LIMD2-207ENST00000579329 SMC4Q9NTJ3 1288 aa30.39■■■□□ 2.46
LIMD2-207ENST00000579329 TAF1P21675 1872 aa30.38■■■□□ 2.45
LIMD2-207ENST00000579329 CTSWP56202 376 aa30.38■■■□□ 2.45
LIMD2-207ENST00000579329 KLRG1Q96E93 195 aa30.38■■■□□ 2.45
LIMD2-207ENST00000579329 IARSP41252 1262 aaKnown RBP30.37■■■□□ 2.45
LIMD2-207ENST00000579329 SLC4A10Q6U841 1118 aa30.37■■■□□ 2.45
LIMD2-207ENST00000579329 LRRC37AA6NMS7 1700 aa30.36■■■□□ 2.45
LIMD2-207ENST00000579329 GLTPD2A6NH11 291 aa30.35■■■□□ 2.45
LIMD2-207ENST00000579329 ALDH1L1O75891 902 aa30.35■■■□□ 2.45
LIMD2-207ENST00000579329 CASP7P55210 303 aa30.35■■■□□ 2.45
LIMD2-207ENST00000579329 PLA2G12BQ9BX93 195 aa30.35■■■□□ 2.45
LIMD2-207ENST00000579329 SRCIN1Q9C0H9 1055 aa30.35■■■□□ 2.45
LIMD2-207ENST00000579329 SEC31BQ9NQW1 1179 aa30.35■■■□□ 2.45
LIMD2-207ENST00000579329 MYH3P11055 1940 aa30.34■■■□□ 2.45
LIMD2-207ENST00000579329 RPS8P62241 208 aaKnown RBP30.34■■■□□ 2.45
LIMD2-207ENST00000579329 MPNDQ8N594 471 aa30.34■■■□□ 2.45
LIMD2-207ENST00000579329 CCDC85AQ96PX6 553 aaPredicted RBP30.34■■■□□ 2.45
LIMD2-207ENST00000579329 COL4A1P02462 1669 aa30.33■■■□□ 2.45
LIMD2-207ENST00000579329 ZBED9Q6R2W3 1325 aa30.33■■■□□ 2.45
LIMD2-207ENST00000579329 DPY19L2Q6NUT2 758 aa30.33■■■□□ 2.45
LIMD2-207ENST00000579329 DPP8Q6V1X1 898 aaPredicted RBP30.33■■■□□ 2.45
LIMD2-207ENST00000579329 SUPT20HQ8NEM7 779 aa30.33■■■□□ 2.45
LIMD2-207ENST00000579329 TTLL11Q8NHH1 800 aa30.33■■■□□ 2.45
LIMD2-207ENST00000579329 JMYQ8N9B5 988 aa30.32■■■□□ 2.44
LIMD2-207ENST00000579329 RTFDC1Q9BY42 306 aaPredicted RBP30.32■■■□□ 2.44
LIMD2-207ENST00000579329 PCNTO95613 3336 aa30.32■■■□□ 2.44
LIMD2-207ENST00000579329 RTL9Q8NET4 1388 aa30.31■■■□□ 2.44
LIMD2-207ENST00000579329 GRM8O00222 908 aa30.3■■■□□ 2.44
LIMD2-207ENST00000579329 JDP2Q8WYK2 163 aa30.3■■■□□ 2.44
LIMD2-207ENST00000579329 CDC5LQ99459 802 aaKnown RBP30.3■■■□□ 2.44
LIMD2-207ENST00000579329 VPS33BQ9H267 617 aa30.3■■■□□ 2.44
LIMD2-207ENST00000579329 RARSP54136 660 aaKnown RBP30.29■■■□□ 2.44
LIMD2-207ENST00000579329 BRPF1P55201 1214 aaPredicted RBP30.29■■■□□ 2.44
LIMD2-207ENST00000579329 ANKRD18AQ8IVF6 992 aa30.29■■■□□ 2.44
LIMD2-207ENST00000579329 LARGE2Q8N3Y3 721 aa30.29■■■□□ 2.44
LIMD2-207ENST00000579329 GREM2Q9H772 168 aa30.29■■■□□ 2.44
LIMD2-207ENST00000579329 C9orf78Q9NZ63 289 aaPredicted RBP30.29■■■□□ 2.44
LIMD2-207ENST00000579329 PPIP5K2O43314 1243 aa30.27■■■□□ 2.44
LIMD2-207ENST00000579329 COL13A1Q5TAT6 717 aaPredicted RBP30.27■■■□□ 2.44
LIMD2-207ENST00000579329 SMC1BQ8NDV3 1235 aa30.27■■■□□ 2.44
LIMD2-207ENST00000579329 DUOX1Q9NRD9 1551 aa30.26■■■□□ 2.43
LIMD2-207ENST00000579329 NSFL1CQ9UNZ2 370 aaKnown RBP30.26■■■□□ 2.43
LIMD2-207ENST00000579329 FZD9O00144 591 aa30.25■■■□□ 2.43
LIMD2-207ENST00000579329 CSF1RP07333 972 aa30.25■■■□□ 2.43
LIMD2-207ENST00000579329 AOC3Q16853 763 aa30.25■■■□□ 2.43
LIMD2-207ENST00000579329 COL4A5P29400 1685 aa30.25■■■□□ 2.43
LIMD2-207ENST00000579329 GPSM2P81274 684 aa30.24■■■□□ 2.43
LIMD2-207ENST00000579329 NIM1KQ8IY84 436 aa30.24■■■□□ 2.43
LIMD2-207ENST00000579329 NOB1Q9ULX3 412 aaKnown RBP30.24■■■□□ 2.43
LIMD2-207ENST00000579329 KIF16BQ96L93 1317 aa30.23■■■□□ 2.43
LIMD2-207ENST00000579329 ZNF541Q9H0D2 1346 aa30.23■■■□□ 2.43
LIMD2-207ENST00000579329 DDNO94850 711 aaPredicted RBP30.23■■■□□ 2.43
LIMD2-207ENST00000579329 FAM161AQ3B820 660 aa30.23■■■□□ 2.43
LIMD2-207ENST00000579329 API5Q9BZZ5 524 aaKnown RBP30.23■■■□□ 2.43
LIMD2-207ENST00000579329 ITGA6P23229 1130 aa30.22■■■□□ 2.43
LIMD2-207ENST00000579329 FOXO4P98177 505 aa30.22■■■□□ 2.43
LIMD2-207ENST00000579329 KIAA2012Q0VF49 1180 aa30.22■■■□□ 2.43
LIMD2-207ENST00000579329 LTBP1Q14766 1721 aa30.22■■■□□ 2.43
LIMD2-207ENST00000579329 VEGFAP15692 232 aaPredicted RBP30.21■■■□□ 2.43
LIMD2-207ENST00000579329 EIF6P56537 245 aaKnown RBP30.21■■■□□ 2.43
LIMD2-207ENST00000579329 PODXL2Q9NZ53 605 aa30.21■■■□□ 2.43
LIMD2-207ENST00000579329 UTYO14607 1347 aa30.21■■■□□ 2.43
LIMD2-207ENST00000579329 IGHMBP2P38935 993 aaKnown RBP30.2■■■□□ 2.43
LIMD2-207ENST00000579329 BSDC1Q9NW68 430 aaPredicted RBP30.2■■■□□ 2.43
LIMD2-207ENST00000579329 C6orf229H3BNL8 230 aa30.19■■■□□ 2.42
LIMD2-207ENST00000579329 EYA3Q99504 573 aa30.19■■■□□ 2.42
LIMD2-207ENST00000579329 ANKIB1Q9P2G1 1089 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms