RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 GRAPLQ8TC17 118 aaPredicted RBP11.63□□□□□ -0.55
GGA3-207ENST00000578896 JARID2Q92833 1246 aaPredicted RBP11.63□□□□□ -0.55
GGA3-207ENST00000578896 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
GGA3-207ENST00000578896 ISCA1Q9BUE6 129 aa11.63□□□□□ -0.55
GGA3-207ENST00000578896 PHAXQ9H814 394 aaKnown RBP11.63□□□□□ -0.55
GGA3-207ENST00000578896 COL4A1P02462 1669 aa11.62□□□□□ -0.55
GGA3-207ENST00000578896 SHTN1A0MZ66 631 aa11.62□□□□□ -0.55
GGA3-207ENST00000578896 FOXN1O15353 648 aa11.62□□□□□ -0.55
GGA3-207ENST00000578896 BBOX1O75936 387 aa11.62□□□□□ -0.55
GGA3-207ENST00000578896 RAD17O75943 681 aa11.62□□□□□ -0.55
GGA3-207ENST00000578896 GMPSP49915 693 aaPredicted RBP11.62□□□□□ -0.55
GGA3-207ENST00000578896 CCDC184Q52MB2 194 aa11.62□□□□□ -0.55
GGA3-207ENST00000578896 CELF1Q92879 486 aaKnown RBP11.62□□□□□ -0.55
GGA3-207ENST00000578896 DBF4Q9UBU7 674 aaPredicted RBP11.62□□□□□ -0.55
GGA3-207ENST00000578896 DDX60Q8IY21 1712 aaKnown RBP11.61□□□□□ -0.55
GGA3-207ENST00000578896 RIMBP2O15034 1052 aa11.61□□□□□ -0.55
GGA3-207ENST00000578896 ZNF853P0CG23 659 aa11.61□□□□□ -0.55
GGA3-207ENST00000578896 GRIPAP1Q4V328 841 aa11.61□□□□□ -0.55
GGA3-207ENST00000578896 C8orf58Q8NAV2 365 aa11.61□□□□□ -0.55
GGA3-207ENST00000578896 GPR101Q96P66 508 aaPredicted RBP11.61□□□□□ -0.55
GGA3-207ENST00000578896 RTFDC1Q9BY42 306 aaPredicted RBP11.61□□□□□ -0.55
GGA3-207ENST00000578896 ZNRF3Q9ULT6 936 aa11.61□□□□□ -0.55
GGA3-207ENST00000578896 ABT1Q9ULW3 272 aaKnown RBP11.61□□□□□ -0.55
GGA3-207ENST00000578896 POLR2AP24928 1970 aaKnown RBP11.6□□□□□ -0.55
GGA3-207ENST00000578896 YDJCA8MPS7 323 aa11.6□□□□□ -0.55
GGA3-207ENST00000578896 GRM1Q13255 1194 aa11.6□□□□□ -0.55
GGA3-207ENST00000578896 DEFB115Q30KQ5 88 aa11.6□□□□□ -0.55
GGA3-207ENST00000578896 RIC3Q7Z5B4 369 aa11.6□□□□□ -0.55
GGA3-207ENST00000578896 SUPT20HQ8NEM7 779 aa11.6□□□□□ -0.55
GGA3-207ENST00000578896 CCDC85AQ96PX6 553 aaPredicted RBP11.6□□□□□ -0.55
GGA3-207ENST00000578896 MYD88Q99836 296 aa11.6□□□□□ -0.55
GGA3-207ENST00000578896 HYPKQ9NX55 129 aa11.6□□□□□ -0.55
GGA3-207ENST00000578896 GPRC5DQ9NZD1 345 aa11.6□□□□□ -0.55
GGA3-207ENST00000578896 IRS4O14654 1257 aaPredicted RBP11.59□□□□□ -0.55
GGA3-207ENST00000578896 HOXB7P09629 217 aa11.59□□□□□ -0.55
GGA3-207ENST00000578896 HIRAP54198 1017 aaPredicted RBP11.59□□□□□ -0.55
GGA3-207ENST00000578896 GPSM2P81274 684 aa11.59□□□□□ -0.55
GGA3-207ENST00000578896 KIAA2012Q0VF49 1180 aa11.59□□□□□ -0.55
GGA3-207ENST00000578896 CIAPIN1Q6FI81 312 aa11.59□□□□□ -0.55
GGA3-207ENST00000578896 DLK2Q6UY11 383 aa11.59□□□□□ -0.55
GGA3-207ENST00000578896 PAXIP1Q6ZW49 1069 aaPredicted RBP11.59□□□□□ -0.55
GGA3-207ENST00000578896 USP50Q70EL3 339 aaPredicted RBP11.59□□□□□ -0.55
GGA3-207ENST00000578896 BCL2L13Q9BXK5 485 aa11.59□□□□□ -0.55
GGA3-207ENST00000578896 DBNDD1Q9H9R9 158 aa11.59□□□□□ -0.55
GGA3-207ENST00000578896 SEC31BQ9NQW1 1179 aa11.59□□□□□ -0.55
GGA3-207ENST00000578896 KCNQ5Q9NR82 932 aa11.59□□□□□ -0.55
GGA3-207ENST00000578896 NSFL1CQ9UNZ2 370 aaKnown RBP11.59□□□□□ -0.55
GGA3-207ENST00000578896 ZBTB12Q9Y330 459 aaPredicted RBP11.59□□□□□ -0.55
GGA3-207ENST00000578896 TRPM7Q96QT4 1865 aa11.58□□□□□ -0.56
GGA3-207ENST00000578896 RASSF10A6NK89 507 aa11.58□□□□□ -0.56
GGA3-207ENST00000578896 C6orf229H3BNL8 230 aa11.58□□□□□ -0.56
GGA3-207ENST00000578896 GNAI1P63096 354 aa11.58□□□□□ -0.56
GGA3-207ENST00000578896 SF3B3Q15393 1217 aaKnown RBP11.58□□□□□ -0.56
GGA3-207ENST00000578896 DOK7Q18PE1 504 aa11.58□□□□□ -0.56
GGA3-207ENST00000578896 CST9Q5W186 159 aa11.58□□□□□ -0.56
GGA3-207ENST00000578896 TSPYL6Q8N831 410 aa11.58□□□□□ -0.56
GGA3-207ENST00000578896 TRPM4Q8TD43 1214 aa11.58□□□□□ -0.56
GGA3-207ENST00000578896 GLIS2Q9BZE0 524 aaPredicted RBP11.58□□□□□ -0.56
GGA3-207ENST00000578896 ADARB2Q9NS39 739 aaKnown RBP11.58□□□□□ -0.56
GGA3-207ENST00000578896 IFT57Q9NWB7 429 aa11.58□□□□□ -0.56
GGA3-207ENST00000578896 POLLQ9UGP5 575 aa11.58□□□□□ -0.56
GGA3-207ENST00000578896 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.56
GGA3-207ENST00000578896 WDR33Q9C0J8 1336 aaKnown RBP11.58□□□□□ -0.56
GGA3-207ENST00000578896 GOLGA2Q08379 1002 aa11.57□□□□□ -0.56
GGA3-207ENST00000578896 CYP4F22Q6NT55 531 aa11.57□□□□□ -0.56
GGA3-207ENST00000578896 TSR2Q969E8 191 aaKnown RBP11.57□□□□□ -0.56
GGA3-207ENST00000578896 VPS33BQ9H267 617 aa11.57□□□□□ -0.56
GGA3-207ENST00000578896 WBP1LQ9NX94 342 aa11.57□□□□□ -0.56
GGA3-207ENST00000578896 CNOT7Q9UIV1 285 aaKnown RBP11.57□□□□□ -0.56
GGA3-207ENST00000578896 PSMD14O00487 310 aa11.56□□□□□ -0.56
GGA3-207ENST00000578896 LBX1P52954 281 aa11.56□□□□□ -0.56
GGA3-207ENST00000578896 RPS8P62241 208 aaKnown RBP11.56□□□□□ -0.56
GGA3-207ENST00000578896 TRIM28Q13263 835 aaKnown RBP11.56□□□□□ -0.56
GGA3-207ENST00000578896 TNIP1Q15025 636 aa11.56□□□□□ -0.56
GGA3-207ENST00000578896 WASHC4Q2M389 1173 aa11.56□□□□□ -0.56
GGA3-207ENST00000578896 RBM26Q5T8P6 1007 aaKnown RBP11.56□□□□□ -0.56
GGA3-207ENST00000578896 AIDAQ96BJ3 306 aa11.56□□□□□ -0.56
GGA3-207ENST00000578896 ZNF408Q9H9D4 720 aa11.56□□□□□ -0.56
GGA3-207ENST00000578896 AOC2O75106 756 aa11.55□□□□□ -0.56
GGA3-207ENST00000578896 CELF2O95319 508 aaKnown RBP11.55□□□□□ -0.56
GGA3-207ENST00000578896 EGFRP00533 1210 aa11.55□□□□□ -0.56
GGA3-207ENST00000578896 SAMD7Q7Z3H4 446 aa11.55□□□□□ -0.56
GGA3-207ENST00000578896 MICALL2Q8IY33 904 aa11.55□□□□□ -0.56
GGA3-207ENST00000578896 ZBTB38Q8NAP3 1195 aaPredicted RBP11.55□□□□□ -0.56
GGA3-207ENST00000578896 CAPNS2Q96L46 248 aa11.55□□□□□ -0.56
GGA3-207ENST00000578896 LRRC37AA6NMS7 1700 aa11.55□□□□□ -0.56
GGA3-207ENST00000578896 SCN9AQ15858 1988 aa11.54□□□□□ -0.56
GGA3-207ENST00000578896 ECE2O60344 883 aa11.54□□□□□ -0.56
GGA3-207ENST00000578896 CTCFP49711 727 aaPredicted RBP11.54□□□□□ -0.56
GGA3-207ENST00000578896 TBC1D10BQ4KMP7 808 aaPredicted RBP11.54□□□□□ -0.56
GGA3-207ENST00000578896 TMC4Q7Z404 712 aa11.54□□□□□ -0.56
GGA3-207ENST00000578896 USP48Q86UV5 1035 aa11.54□□□□□ -0.56
GGA3-207ENST00000578896 TBC1D16Q8TBP0 767 aa11.54□□□□□ -0.56
GGA3-207ENST00000578896 TSKSQ9UJT2 592 aa11.54□□□□□ -0.56
GGA3-207ENST00000578896 MAP3K2Q9Y2U5 619 aa11.54□□□□□ -0.56
GGA3-207ENST00000578896 SALL2Q9Y467 1007 aaPredicted RBP11.54□□□□□ -0.56
GGA3-207ENST00000578896 WTIPA6NIX2 430 aaPredicted RBP11.53□□□□□ -0.56
GGA3-207ENST00000578896 H7C1D1 291 aa11.53□□□□□ -0.56
GGA3-207ENST00000578896 PCCAP05165 728 aaPredicted RBP11.53□□□□□ -0.56
GGA3-207ENST00000578896 HSPA8P11142 646 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms