RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 NIM1KQ8IY84 436 aa20.49■□□□□ 0.87
CRLF3-203ENST00000578692 TSR2Q969E8 191 aaKnown RBP20.49■□□□□ 0.87
CRLF3-203ENST00000578692 RTFDC1Q9BY42 306 aaPredicted RBP20.49■□□□□ 0.87
CRLF3-203ENST00000578692 COL4A5P29400 1685 aa20.49■□□□□ 0.87
CRLF3-203ENST00000578692 AOC3Q16853 763 aa20.48■□□□□ 0.87
CRLF3-203ENST00000578692 NCBP3Q53F19 620 aaKnown RBP20.48■□□□□ 0.87
CRLF3-203ENST00000578692 PNMA8AQ86V59 439 aaPredicted RBP20.48■□□□□ 0.87
CRLF3-203ENST00000578692 JMYQ8N9B5 988 aa20.48■□□□□ 0.87
CRLF3-203ENST00000578692 MYD88Q99836 296 aa20.48■□□□□ 0.87
CRLF3-203ENST00000578692 CLEC11AQ9Y240 323 aa20.48■□□□□ 0.87
CRLF3-203ENST00000578692 IRS4O14654 1257 aaPredicted RBP20.47■□□□□ 0.87
CRLF3-203ENST00000578692 DDX58O95786 925 aaKnown RBP20.47■□□□□ 0.87
CRLF3-203ENST00000578692 TMC4Q7Z404 712 aa20.47■□□□□ 0.87
CRLF3-203ENST00000578692 TAF1P21675 1872 aa20.47■□□□□ 0.87
CRLF3-203ENST00000578692 DDX60Q8IY21 1712 aaKnown RBP20.47■□□□□ 0.87
CRLF3-203ENST00000578692 ZBTB38Q8NAP3 1195 aaPredicted RBP20.46■□□□□ 0.87
CRLF3-203ENST00000578692 CCDC191Q8NCU4 936 aa20.46■□□□□ 0.87
CRLF3-203ENST00000578692 METTL22Q9BUU2 404 aaPredicted RBP20.46■□□□□ 0.87
CRLF3-203ENST00000578692 IL16Q14005 1332 aa20.45■□□□□ 0.86
CRLF3-203ENST00000578692 LMOD1P29536 600 aaPredicted RBP20.45■□□□□ 0.86
CRLF3-203ENST00000578692 CELF1Q92879 486 aaKnown RBP20.45■□□□□ 0.86
CRLF3-203ENST00000578692 ZNRF3Q9ULT6 936 aa20.45■□□□□ 0.86
CRLF3-203ENST00000578692 ITGBL1O95965 494 aaPredicted RBP20.44■□□□□ 0.86
CRLF3-203ENST00000578692 HSP90B1P14625 803 aaKnown RBP20.44■□□□□ 0.86
CRLF3-203ENST00000578692 KIAA2012Q0VF49 1180 aa20.44■□□□□ 0.86
CRLF3-203ENST00000578692 TWISTNBQ3B726 338 aaPredicted RBP20.44■□□□□ 0.86
CRLF3-203ENST00000578692 STK31Q9BXU1 1019 aa20.44■□□□□ 0.86
CRLF3-203ENST00000578692 CREBZFQ9NS37 354 aa20.44■□□□□ 0.86
CRLF3-203ENST00000578692 SALL2Q9Y467 1007 aaPredicted RBP20.44■□□□□ 0.86
CRLF3-203ENST00000578692 EPS15P42566 896 aa20.43■□□□□ 0.86
CRLF3-203ENST00000578692 SCNN1DP51172 638 aa20.43■□□□□ 0.86
CRLF3-203ENST00000578692 KSR2Q6VAB6 950 aa20.43■□□□□ 0.86
CRLF3-203ENST00000578692 CWC25Q9NXE8 425 aaPredicted RBP20.43■□□□□ 0.86
CRLF3-203ENST00000578692 MAP3K2Q9Y2U5 619 aa20.43■□□□□ 0.86
CRLF3-203ENST00000578692 PASKQ96RG2 1323 aa20.42■□□□□ 0.86
CRLF3-203ENST00000578692 PCCAP05165 728 aaPredicted RBP20.42■□□□□ 0.86
CRLF3-203ENST00000578692 CXCL9Q07325 125 aa20.42■□□□□ 0.86
CRLF3-203ENST00000578692 NSFL1CQ9UNZ2 370 aaKnown RBP20.42■□□□□ 0.86
CRLF3-203ENST00000578692 PI4KAP2A4QPH2 592 aa20.41■□□□□ 0.86
CRLF3-203ENST00000578692 RPS8P62241 208 aaKnown RBP20.41■□□□□ 0.86
CRLF3-203ENST00000578692 WDR63Q8IWG1 891 aa20.41■□□□□ 0.86
CRLF3-203ENST00000578692 CNTROBQ8N137 903 aa20.41■□□□□ 0.86
CRLF3-203ENST00000578692 PI4KAP1Q8N8J0 262 aa20.41■□□□□ 0.86
CRLF3-203ENST00000578692 JARID2Q92833 1246 aaPredicted RBP20.41■□□□□ 0.86
CRLF3-203ENST00000578692 ADAMTSL1Q8N6G6 1762 aa20.4■□□□□ 0.86
CRLF3-203ENST00000578692 PDE8AO60658 829 aa20.4■□□□□ 0.86
CRLF3-203ENST00000578692 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
CRLF3-203ENST00000578692 MAP1SQ66K74 1059 aaPredicted RBP20.4■□□□□ 0.86
CRLF3-203ENST00000578692 CIAPIN1Q6FI81 312 aa20.39■□□□□ 0.85
CRLF3-203ENST00000578692 SEC31BQ9NQW1 1179 aa20.39■□□□□ 0.85
CRLF3-203ENST00000578692 LTBP1Q14766 1721 aa20.39■□□□□ 0.85
CRLF3-203ENST00000578692 NEXNQ0ZGT2 675 aa20.38■□□□□ 0.85
CRLF3-203ENST00000578692 TNIP1Q15025 636 aa20.38■□□□□ 0.85
CRLF3-203ENST00000578692 WASHC4Q2M389 1173 aa20.38■□□□□ 0.85
CRLF3-203ENST00000578692 CCDC152Q4G0S7 254 aa20.38■□□□□ 0.85
CRLF3-203ENST00000578692 USP50Q70EL3 339 aaPredicted RBP20.38■□□□□ 0.85
CRLF3-203ENST00000578692 G2E3Q7L622 706 aa20.38■□□□□ 0.85
CRLF3-203ENST00000578692 FAM9BQ8IZU0 186 aa20.38■□□□□ 0.85
CRLF3-203ENST00000578692 GPRC5DQ9NZD1 345 aa20.38■□□□□ 0.85
CRLF3-203ENST00000578692 LRRC37AA6NMS7 1700 aa20.38■□□□□ 0.85
CRLF3-203ENST00000578692 TMEM88BA6NKF7 163 aa20.37■□□□□ 0.85
CRLF3-203ENST00000578692 C6orf229H3BNL8 230 aa20.37■□□□□ 0.85
CRLF3-203ENST00000578692 RAD17O75943 681 aa20.37■□□□□ 0.85
CRLF3-203ENST00000578692 IGKV5-2P06315 115 aa20.37■□□□□ 0.85
CRLF3-203ENST00000578692 GPSM2P81274 684 aa20.37■□□□□ 0.85
CRLF3-203ENST00000578692 POLLQ9UGP5 575 aa20.37■□□□□ 0.85
CRLF3-203ENST00000578692 MKRN1Q9UHC7 482 aaKnown RBP20.37■□□□□ 0.85
CRLF3-203ENST00000578692 FANCIQ9NVI1 1328 aa20.37■□□□□ 0.85
CRLF3-203ENST00000578692 COL4A1P02462 1669 aa20.36■□□□□ 0.85
CRLF3-203ENST00000578692 IFFO2Q5TF58 517 aa20.36■□□□□ 0.85
CRLF3-203ENST00000578692 ADARB2Q9NS39 739 aaKnown RBP20.36■□□□□ 0.85
CRLF3-203ENST00000578692 CDHR2Q9BYE9 1310 aa20.36■□□□□ 0.85
CRLF3-203ENST00000578692 DUOX1Q9NRD9 1551 aa20.36■□□□□ 0.85
CRLF3-203ENST00000578692 YDJCA8MPS7 323 aa20.35■□□□□ 0.85
CRLF3-203ENST00000578692 RIMBP2O15034 1052 aa20.35■□□□□ 0.85
CRLF3-203ENST00000578692 VAMP4O75379 141 aa20.35■□□□□ 0.85
CRLF3-203ENST00000578692 GMPSP49915 693 aaPredicted RBP20.35■□□□□ 0.85
CRLF3-203ENST00000578692 CCDC85AQ96PX6 553 aaPredicted RBP20.35■□□□□ 0.85
CRLF3-203ENST00000578692 EYA3Q99504 573 aa20.35■□□□□ 0.85
CRLF3-203ENST00000578692 BCL2L13Q9BXK5 485 aa20.35■□□□□ 0.85
CRLF3-203ENST00000578692 EXOSC9Q06265 439 aaKnown RBP20.34■□□□□ 0.85
CRLF3-203ENST00000578692 CWF19L2Q2TBE0 894 aaKnown RBP20.34■□□□□ 0.85
CRLF3-203ENST00000578692 TBC1D16Q8TBP0 767 aa20.34■□□□□ 0.85
CRLF3-203ENST00000578692 NEURL1BA8MQ27 555 aa20.34■□□□□ 0.85
CRLF3-203ENST00000578692 FLIIQ13045 1269 aa20.34■□□□□ 0.85
CRLF3-203ENST00000578692 DBNDD1Q9H9R9 158 aa20.34■□□□□ 0.85
CRLF3-203ENST00000578692 PODXL2Q9NZ53 605 aa20.34■□□□□ 0.85
CRLF3-203ENST00000578692 ZC3H12CQ9C0D7 883 aaKnown RBP20.33■□□□□ 0.84
CRLF3-203ENST00000578692 ANKIB1Q9P2G1 1089 aa20.33■□□□□ 0.84
CRLF3-203ENST00000578692 CNTNAP1P78357 1384 aa20.32■□□□□ 0.84
CRLF3-203ENST00000578692 CTSWP56202 376 aa20.32■□□□□ 0.84
CRLF3-203ENST00000578692 FKBP5Q13451 457 aaPredicted RBP20.32■□□□□ 0.84
CRLF3-203ENST00000578692 ANKRD18AQ8IVF6 992 aa20.32■□□□□ 0.84
CRLF3-203ENST00000578692 TTLL11Q8NHH1 800 aa20.32■□□□□ 0.84
CRLF3-203ENST00000578692 SPINK5Q9NQ38 1064 aaPredicted RBP20.32■□□□□ 0.84
CRLF3-203ENST00000578692 CNOT7Q9UIV1 285 aaKnown RBP20.32■□□□□ 0.84
CRLF3-203ENST00000578692 H7C1W4 665 aa20.31■□□□□ 0.84
CRLF3-203ENST00000578692 HSPA1AP0DMV8 641 aaKnown RBP20.31■□□□□ 0.84
CRLF3-203ENST00000578692 HSPA1BP0DMV9 641 aaKnown RBP20.31■□□□□ 0.84
CRLF3-203ENST00000578692 DOK7Q18PE1 504 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms